Accurate Whole-Genome Sequencing and Haplotyping from 10 to 20 Human Cells

Recent advances in whole genome sequencing have brought the vision of personal genomics and genomic medicine closer to reality. However, current methods lack clinical accuracy and the ability to describe the context (haplotypes) in which genome variants co-occur in a cost-effective manner. Here we describe a low-cost DNA sequencing and haplotyping process, Long Fragment Read (LFR) technology, similar to sequencing long single DNA molecules without cloning or separation of metaphase chromosomes. In this study, ten LFR libraries were made using only ~100 pg of human DNA per sample. Up to 97% of the heterozygous single nucleotide variants (SNVs) were assembled into long haplotype contigs. Removal of false positive SNVs not phased by multiple LFR haplotypes resulted in a final genome error rate of 1 in 10 Mb. Cost-effective and accurate genome sequencing and haplotyping from 10-20 human cells, as demonstrated here, will enable comprehensive genetic studies and diverse clinical applications

Color-Causing Mechanisms of Guatemala Jadeite Jade: Constraints from Spectroscopy and Chemical Compositions

The jadeite jade in Guatemala exerts remarkable commercial quality, which has attracted wide attention. Guatemalan jadeite jade displays a rich variety of colors; however, the color formation of this jadeite jade has not been systematically investigated to date. In this paper, we study different colors of jade samples to trace the compositions and color-causing mechanisms through petrography, X-ray fluorescence spectroscopy (XRF), Fourier transform infrared spectroscopy (FTIR), laser Raman spectroscopy (LRS), and UV-visible absorption spectroscopy (UV-Vis), as well as electron probe microanalysis (EPMA). The results show that jadeite and omphacite are the main mineral compositions of Guatemalan jadeite jade, together with minor albite and other impurities. The color of Guatemala jadeite jade is mainly related to Cr3+, Fe2+, and Fe3+, of which a small amount of Cr3+ causes the jadeite jade to be emerald green. Moreover, 1~2% FeO contents can lead to the blue or gray color of the samples, while the Fe3+ makes the sample dark green. The green color of some Cr3+-free jadeite is caused by the electron transition between bands of Fe3+, and the green color is related to the iron content. Moreover, the chemical composition analysis shows that some metallic elements existed in Guatemalan jadeite jade, such as Ca, Ti, Al, Si, Ni, Fe, Mn, Cr, Na, Mg, and Sr, and some trace elements were lost or unevenly distributed, which may lead to the heterogeneity of the color of the samples. Our present investigation provides insights into color discrimination, quality evaluation, and identification of Guatemala jadeite jade

Novel single- and double-gate race-track-shaped field emitter structures

In this paper, new single- and double-gate race-track-shaped field emitter structures are reported for the first time. The race-track-shaped edge emission is used to provide good uniformity and large field emission current density, and the double-gate control is used to provide small turn-on voltage. Experimental results show that the turn-on voltage of the single-gate structure is approximately 100 V, and the field emission current density is approximately 2.4 A/cm² which is over 12 times larger than that of the volcano-shaped emitter structure reported previously. Furthermore, numerical simulations show that turn-on voltage of the double-gate structure is reduced by 30% compared to the single-gate structure