The first non-mammalian CXCR5 in a teleost fish: molecular cloning and expression analysis in grass carp (Ctenopharyngodon idella)

<p>Abstract</p> <p>Background</p> <p>Chemokines, a group of small and structurally related proteins, mediate chemotaxis of various cell types via chemokine receptors. In mammals, seven different CXC chemokine receptors denoted as CXCR1 to CXCR7 have been reported. However, the chemokine receptor CXCR5 has not been reported in other vertebrates.</p> <p>Results</p> <p>In the present study, the genomic sequence of CXCR5 was isolated from the grass carp <it>Ctenopharyngodon idella</it>. The cDNA sequence of grass carp CXCR5 (gcCXCR5) consists of 1518 bp with a 43 bp 5' untranslated region (UTR) and a 332 bp 3' UTR, with an open reading frame of 1143 bp encoding 381 amino acids which are predicted to have seven transmembrane helices. The characteristic residues (DRYLAIVHA) and conserved cysteine residues are located in the extracellular regions and in the third to seventh transmembrane domains. The deduced amino acid sequence shows 37.6-66.6% identities with CXCR5 of mammals, avian and other fish species. The grass carp gene consists of two exons, with one intervening intron, spaced over 2081 bp of genomic sequence. Phylogenetic analysis clearly demonstrated that the gcCXCR5 is clustered with those in other teleost fish and then in chicken and mammals. Real-time PCR analysis showed that gcCXCR5 was expressed in all tested organs/tissues and its expression level was the highest in trunk kidney, followed by in the spleen. The expression of gcCXCR5 was significantly modulated by immunostimulants such as peptidoglycan (PGN), lipopolysaccharide (LPS), polyinosinic-polycytidylic acid sodium salt (Poly I:C) and phytohaemagglutinin (PHA).</p> <p>Conclusion</p> <p>The cDNA and genomic sequences of CXCR5 have been successfully characterized in a teleost fish, the grass carp. The CXCR5 has in general a constitutive expression in organs/tissues examined, whereas its expression was significantly up-regulated in immune organs and down-regulated in brain, indicating its potential role in immune response and central nervous system.</p

Report of AAPM Therapy Physics Committee Task Group 74: Inâ air output ratio, Sc, for megavoltage photon beams

Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/134830/1/mp7367.pd

Unification of Dark Matter and Dark Energy in a Modified Entropic Force Model

In Verlinde's entropic force scenario of gravity, Newton's laws and Einstein equations can be obtained from the first pinciples and general assumptions. However, the equipartition law of energy is invalid at very low temperatures. We show clearly that the threshold of the equipartition law of energy is related with horizon of the universe. Thus, a one-dimension Debye (ODD) model in the direction of radius of the modified entropic force (MEF) maybe suitable in description of the accelerated expanding universe. We present a Friedmann cosmic dynamical model in the ODD-MEF framework. We examine carefully constraints on the ODD-MEF model from the Union2 compilation of the Supernova Cosmology Project (SCP) collaboration, the data from the observation of the large-scale structure (LSS) and the cosmic microwave background (CMB), i.e. SNe Ia+LSS+CMB. The combined numerical analysis gives the best-fit value of the model parameters $\zeta\simeq10^{-9}$ and $\Omega_{m0}=0.224$, with $\chi_{min}^2=591.156$. The corresponding age of the universe agrees with the result of D. Spergel {\it et al.}\cite{Spergel2003} at 95% confidence level. The numerical result also yields an accelerated expanding universe without invoking any kind of dark energy. Taking $\zeta(\equiv 2\pi \omega_D/H_0)$ as a running parameter associated with the structure scale $r$, we obtain a possible unified scenario of the asymptotic flatness of the radial velocity dispersion of spiral galaxies, the accelerated expanding universe and the Pioneer 10/11 anomaly in the entropic force framework of Verlinde.Comment: 23 pages, 6 figure

Berry phase, hyperorbits, and the Hofstadter spectrum: semiclassical dynamics in magnetic Bloch bands

We have derived a new set of semiclassical equations for electrons in magnetic Bloch bands. The velocity and energy of magnetic Bloch electrons are found to be modified by the Berry phase and magnetization. This semiclassical approach is used to study general electron transport in a DC or AC electric field. We also find a close connection between the cyclotron orbits in magnetic Bloch bands and the energy subbands in the Hofstadter spectrum. Based on this formalism, the pattern of band splitting, the distribution of Hall conduct- ivities, and the positions of energy subbands in the Hofstadter spectrum can be understood in a simple and unified picture.Comment: 26 pages, Revtex, 6 figures included, submitted to Phys.Rev.

Identification of Novel Susceptibility Loci for Kawasaki Disease in a Han Chinese Population by a Genome-Wide Association Study

Kawasaki disease (KD) is an acute systemic vasculitis syndrome that primarily affects infants and young children. Its etiology is unknown; however, epidemiological findings suggest that genetic predisposition underlies disease susceptibility. Taiwan has the third-highest incidence of KD in the world, after Japan and Korea. To investigate novel mechanisms that might predispose individuals to KD, we conducted a genome-wide association study (GWAS) in 250 KD patients and 446 controls in a Han Chinese population residing in Taiwan, and further validated our findings in an independent Han Chinese cohort of 208 cases and 366 controls. The most strongly associated single-nucleotide polymorphisms (SNPs) detected in the joint analysis corresponded to three novel loci. Among these KD-associated SNPs three were close to the COPB2 (coatomer protein complex beta-2 subunit) gene: rs1873668 (p = 9.52×10−5), rs4243399 (p = 9.93×10−5), and rs16849083 (p = 9.93×10−5). We also identified a SNP in the intronic region of the ERAP1 (endoplasmic reticulum amino peptidase 1) gene (rs149481, pbest = 4.61×10−5). Six SNPs (rs17113284, rs8005468, rs10129255, rs2007467, rs10150241, and rs12590667) clustered in an area containing immunoglobulin heavy chain variable regions genes, with pbest-values between 2.08×10−5 and 8.93×10−6, were also identified. This is the first KD GWAS performed in a Han Chinese population. The novel KD candidates we identified have been implicated in T cell receptor signaling, regulation of proinflammatory cytokines, as well as antibody-mediated immune responses. These findings may lead to a better understanding of the underlying molecular pathogenesis of KD