Distribution of proteins identified in secretomes of four Ascomycete fungi among broad functional groups.

<p>(A) Experimentally observed secretome. Proteins identified via LC-MS/MS over a 21-day study. (B) Portion of experimental secretome predicted to be secreted based on genome analysis (see text for further explanation). (C) Full predicted secretome based on genomes only. Total number of proteins identified for each fungus is indicated in center of circles. Abbreviations from CAZy database: AA = auxiliary activities; CBM = carbohydrate-binding module; CE = carbohydrate esterase; GH = glycoside hydrolase; GT = glucosyltransferase; PL = polysaccharide lyase.</p

Genome-based evaluation of unique proteins experimentally identified in secretomes of four Ascomycete fungi.

<p>Genome-based evaluation of unique proteins experimentally identified in secretomes of four Ascomycete fungi.</p

Distribution of unique proteins experimentally identified in secretomes of four Ascomycete fungi.

<p>(A) Proteins unique to each fungus based on amino acid sequence (as determined by JGI protein ID). (B) Proteins unique to each fungus based on predicted function (evaluated manually). Proteins identified via LC-MS/MS over a 21-day study. Total number of unique proteins identified for each fungus is indicated in center of circles. Abbreviations as in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0157844#pone.0157844.g001" target="_blank">Fig 1</a>.</p

Distribution of proteins experimentally identified in secretomes of four Ascomycete fungi among protein families.

<p>Glycoside hydrolase families (both top and bottom panels). Solid bars: Portion of experimental secretome predicted to be secreted based on genome analysis. Shaded bars: Portion not predicted to be secreted. Proteins identified via LC-MS/MS over a 21-day study and classified according to the CAZy database. Abbreviations as in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0157844#pone.0157844.g001" target="_blank">Fig 1</a>.</p

Summary of identified CAZymes in secretomes of four Ascomycete fungi.

<p>Summary of identified CAZymes in secretomes of four Ascomycete fungi.</p

Venn diagram showing number of unique and shared proteins experimentally identified in Ascomycete fungi secretomes.

<p>Proteins identified via LC-MS/MS over a 21-day study. Total number of proteins identified for each fungus is indicated outside of diagram. Diagram generated with Venny 2.0 [<i>Oliveros</i>, <i>J</i>.<i>C</i>. <i>(2007–2015) Venny</i>. <i>An interactive tool for comparing lists with Venn’s diagrams. <a href="http://bioinfogp.cnb.csic.es/tools/venny/index.html" target="_blank">http://bioinfogp.cnb.csic.es/tools/venny/index.html</a></i>].</p