Use of Genome-scale Models to get new insights into the MarineActinomycete genus Salinispora: Microbial engineering and its application in secondary metabolite production

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Interaction and Regulation of Carbon, Nitrogen, and Phosphorus Metabolisms in Root Nodules of Legumes

Members of the plant family Leguminosae (Fabaceae) are unique in that they have evolved a symbiotic relationship with rhizobia (a group of soil bacteria that can fix atmospheric nitrogen). Rhizobia infect and form root nodules on their specific host plants before differentiating into bacteroids, the symbiotic form of rhizobia. This complex relationship involves the supply of C4-dicarboxylate and phosphate by the host plants to the microsymbionts that utilize them in the energy-intensive process of fixing atmospheric nitrogen into ammonium, which is in turn made available to the host plants as a source of nitrogen, a macronutrient for growth. Although nitrogen-fixing bacteroids are no longer growing, they are metabolically active. The symbiotic process is complex and tightly regulated by both the host plants and the bacteroids. The metabolic pathways of carbon, nitrogen, and phosphate are heavily regulated in the host plants, as they need to strike a fine balance between satisfying their own needs as well as those of the microsymbionts. A network of transporters for the various metabolites are responsible for the trafficking of these essential molecules between the two partners through the symbiosome membrane (plant-derived membrane surrounding the bacteroid), and these are in turn regulated by various transcription factors that control their expressions under different environmental conditions. Understanding this complex process of symbiotic nitrogen fixation is vital in promoting sustainable agriculture and enhancing soil fertility

Cultural and generational factors shape Asians’ sustainable food choices:Insights from choice experiments and information nudges

Promoting sustainable diets is crucial for mitigating global greenhouse gas emissions. We investigated the potential for large-scale dietary shifts to address the impacts of climate change on agriculture and food through surveys and choice experiments in China, Japan, and Vietnam (n = 5,089). Our findings reveal that Asian consumers are largely unwilling to deviate from current dietary habits, particularly regarding the consumption of animal proteins. This reluctance persists despite significant preferences for environmental certification as a proxy for greater sustainability in food production, as expressed by wealthier and younger respondents. Information experiments demonstrate that altruistic messaging fails to induce change, and positive information about climate impacts weakens the influence of certification. However, self-enhancement framing, particularly effective with individuals aged 60 years and above, shows promise. Our findings provide valuable insights for researchers and policymakers seeking effective strategies to encourage sustainable diets, shedding light on challenges and potential avenues for successful intervention

Pectin: An overview of sources, extraction and applications in food products, biomedical, pharmaceutical and environmental issues

Pectin is a complex versatile heteropolysaccharide of great importance to food, pharmaceutical and cosmetic industries. It is widely used in the food industry due to its thickening, gelling and emulsification properties and in biomedical and biomaterial applications on account of its potential anti-inflammatory and immunomodulatory effects as well as its biodegradability and biocompatibility properties. Pectin is also a soluble dietary fiber with several beneficial gastrointestinal and physiological effects. The multifunctionality of pectin is related to the nature of its molecule that has diverse chemical structures, physicochemical properties and potential functionalities depending on the sources where it is extracted and on the extraction methods. Therefore, this review focuses on the importance of pectin for today's food, pharmaceutical and cosmetic industries, compiling information on its composition and properties as determined by its origins, especially from waste biomass of the fruits and vegetables processing industry, on commercial applications and research needs. The suitability of the different extraction methods was also discussed, considering cost, energy consumption and productivity. Furthermore, the biodegradation of pectin as a complex process performed by a set of enzymes was also reviewed along with application purposes. Finally, future perspectives reveal pectin to be an astounding functional food ingredient requiring continuous research work

Secretory Peptides as Bullets: Effector Peptides from Pathogens against Antimicrobial Peptides from Soybean

Soybean is an important crop as both human food and animal feed. However, the yield of soybean is heavily impacted by biotic stresses including insect attack and pathogen infection. Insect bites usually make the plants vulnerable to pathogen infection, which causes diseases. Fungi, oomycetes, bacteria, viruses, and nematodes are major soybean pathogens. The infection by pathogens and the defenses mounted by soybean are an interactive and dynamic process. Using fungi, oomycetes, and bacteria as examples, we will discuss the recognition of pathogens by soybean at the molecular level. In this review, we will discuss both the secretory peptides for soybean plant infection and those for pathogen inhibition. Pathogenic secretory peptides and peptides secreted by soybean and its associated microbes will be included. We will also explore the possible use of externally applied antimicrobial peptides identical to those secreted by soybean and its associated microbes as biopesticides

Atacama Database: a platform of the microbiome of the Atacama Desert

The Atacama Desert is one of the oldest and driest places on Earth. In the last decade, microbial richness and diversity has been acknowledged as an important biological resource of this region. Owing to the value of the microbial diversity apparent in potential biotechnology applications and conservation purposes, it is necessary to catalogue these microbial communities to promote research activities and help to preserve the wide range of ecological niches of the Atacama region. A prototype Atacama Database has been designed and it provides a description of the rich microbial diversity of the Atacama Desert, and helps to visualise available literature resources. Data has been collected, curated, and organised into several categories to generate a single record for each organism in the database that covers classification, isolation metadata, morphology, physiology, genome and metabolism information. The current version of Atacama Database contains 2302 microorganisms and includes cultured and uncultured organisms retrieved from different environments within the desert between 1984 and 2016. These organisms are distributed in bacterial, archaeal or eukaryotic domains, along with those that are unclassified taxonomically. The initial prototype of the Atacama Database includes a basic search and taxonomic and advanced search tools to allow identification and comparison of microbial populations, and space distribution within this biome. A geolocation search was implemented to visualise the microbial diversity of the ecological niches defined by sectors and extract general information of the sampling sites. This effort will aid understanding of the microbial ecology of the desert, microbial population dynamics, seasonal behaviour, impact of climate change over time, and reveal further biotechnological applications of these microorganisms.Comisión Nacional de Investigación Cientifica y Tecnológica FB000