Strongly coupled compact lattice QED with staggered fermions

We explore the compact U(1) lattice gauge theory with staggered fermions and gauge field action -\sum_P [\beta \cos(\Theta_P) + \gamma \cos(2\Theta_P)], both for dynamical fermions and in the quenched approximation. (\Theta_P denotes the plaquette angle.) In simulations with dynamical fermions at various \gamma \le -0.2 on 6^4 lattices we find the energy gap at the phase transition of a size comparable to the pure gauge theory for \gamma \le 0 on the same lattice, diminishing with decreasing \gamma. This suggests a second order transition in the thermodynamic limit of the theory with fermions for \gamma below some finite negative value. Studying the theory on large lattices at \gamma = -0.2 in the quenched approximation by means of the equation of state we find non-Gaussian values of the critical exponents associated with the chiral condensate, \beta \simeq 0.32 and \delta \simeq 1.8, and determine the scaling function. Furthermore, we evaluate the meson spectrum and study the PCAC relation.Comment: 21 page

Instant preheating mechanism and UHECR

Top-down models assume that the still unexplained Ultra High Energy Cosmic Rays (UHECR's) are the decay products of superheavy particles. Such particles may have been produced by one of the post-inflationary reheating mechanisms and may account for a fraction of the cold dark matter. In this paper, we assess the phenomenological applicability of the simplest instant preheating framework not to describe a reheating process, but as a mechanism to generate relic supermassive particles as possible sources of UHECR's. We use cosmic ray flux and cold dark matter observational data to constrain the parameters of the model.Comment: 7 pages, 2 figures, submitted to PR

Vacuum solutions of the gravitational field equations in the brane world model

We consider some classes of solutions of the static, spherically symmetric gravitational field equations in the vacuum in the brane world scenario, in which our Universe is a three-brane embedded in a higher dimensional space-time. The vacuum field equations on the brane are reduced to a system of two ordinary differential equations, which describe all the geometric properties of the vacuum as functions of the dark pressure and dark radiation terms (the projections of the Weyl curvature of the bulk, generating non-local brane stresses). Several classes of exact solutions of the vacuum gravitational field equations on the brane are derived. In the particular case of a vanishing dark pressure the integration of the field equations can be reduced to the integration of an Abel type equation. A perturbative procedure, based on the iterative solution of an integral equation, is also developed for this case. Brane vacuums with particular symmetries are investigated by using Lie group techniques. In the case of a static vacuum brane admitting a one-parameter group of conformal motions the exact solution of the field equations can be found, with the functional form of the dark radiation and pressure terms uniquely fixed by the symmetry. The requirement of the invariance of the field equations with respect to the quasi-homologous group of transformations also imposes a unique, linear proportionality relation between the dark energy and dark pressure. A homology theorem for the static, spherically symmetric gravitational field equations in the vacuum on the brane is also proven.Comment: 13 pages, no figures, to appear in PR

Dynamics of Brane-World Cosmological Models

We show that generically the initial singularity is isotropic in spatially homogeneous cosmological models in the brane-world scenario. We then argue that it is plausible that the initial singularity is isotropic in typical brane world cosmological models. Therefore, brane cosmology naturally gives rise to a set of initial data that provide the conditions for inflation to subsequently take place, thereby solving the initial conditions problem and leading to a self--consistent and viable cosmology.Comment: Final version. To appear in Physical Revie

Building The Sugarcane Genome For Biotechnology And Identifying Evolutionary Trends

Background: Sugarcane is the source of sugar in all tropical and subtropical countries and is becoming increasingly important for bio-based fuels. However, its large (10 Gb), polyploid, complex genome has hindered genome based breeding efforts. Here we release the largest and most diverse set of sugarcane genome sequences to date, as part of an on-going initiative to provide a sugarcane genomic information resource, with the ultimate goal of producing a gold standard genome.Results: Three hundred and seventeen chiefly euchromatic BACs were sequenced. A reference set of one thousand four hundred manually-annotated protein-coding genes was generated. A small RNA collection and a RNA-seq library were used to explore expression patterns and the sRNA landscape. In the sucrose and starch metabolism pathway, 16 non-redundant enzyme-encoding genes were identified. One of the sucrose pathway genes, sucrose-6-phosphate phosphohydrolase, is duplicated in sugarcane and sorghum, but not in rice and maize. A diversity analysis of the s6pp duplication region revealed haplotype-structured sequence composition. Examination of hom(e)ologous loci indicate both sequence structural and sRNA landscape variation. A synteny analysis shows that the sugarcane genome has expanded relative to the sorghum genome, largely due to the presence of transposable elements and uncharacterized intergenic and intronic sequences.Conclusion: This release of sugarcane genomic sequences will advance our understanding of sugarcane genetics and contribute to the development of molecular tools for breeding purposes and gene discovery. © 2014 de Setta et al.; licensee BioMed Central Ltd.151European Commission: Agriculture and Rural Development: Sugar http://ec.europa.eu/agriculture/sugar/index_en.htmKellogg, E.A., Evolutionary history of the grasses (2001) Plant Physiol, 125, pp. 1198-1205Grivet, L., Arruda, P., Sugarcane genomics: depicting the complex genome of an important tropical crop (2001) Curr Opin Plant Biol, 5, pp. 122-127Piperidis, G., Piperidis, N., D'Hont, A., Molecular cytogenetic investigation of chromosome composition and transmission in sugarcane (2010) Mol Genet Genomics, 284, pp. 65-73D'Hont, A., 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Acute biphenotypic leukaemia: immunophenotypic and cytogenetic analysis

The incidence of acute biphenotypic leukaemia has ranged from less than 1% to almost 50% in various reports in the literature. This wide variability may be attributed to a number of reasons including lack of consistent diagnostic criteria, use of various panels of antibodies, and the failure to recognize the lack of lineage specificity of some of the antibodies used. The morphology, cytochemistry, immunophenotype and cytogenetics of acute biphenotypic leukaemias from our institution were studied. The diagnostic criteria took into consideration the morphology of the analysed cells, light scatter characteristics, and evaluation of antibody fluorescence histograms in determining whether the aberrant marker expression was arising from leukaemic blasts or differentiated bone marrow elements. Fifty-two of 746 cases (7%) fulfilled our criteria for acute biphenotypic leukaemias. These included 30 cases of acute lymphoblastic leukaemia (ALL) expressing myeloid antigens, 21 cases of acute myelogenous leukaemia (AML) expressing lymphoid markers, and one case of ALL expressing both B- and T-cell associated antigens. The acute biphenotypic leukaemia cases consisted of four major immunophenotypic subgroups: CD2± AML (11), CD19± AML (8), CD13 and/or CD33± ALL (24), CD11b± ALL (5) and others (4). Chromosomal analysis was carried out in 42/52 of the acute biphenotypic leukaemia cases; a clonal abnormality was found in 31 of these 42 cases. This study highlights the problems encountered in the diagnosis of acute biphenotypic leukaemia, some of which may be reponsible for the wide variation in the reported incidence of this leukaemia. We suggest that the use of strict, uniform diagnostic criteria may help in establishing a more consistent approach towards diagnosis of this leukaemic entity. We also suggest that biphenotypic leukaemia is comprised of biologically different groups of leukaemia based on immunophenotypic and cytogenetic findings.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/73301/1/j.1365-2141.1993.tb03024.x.pd