(2R,4R)-3-(tert-But­oxy­carbon­yl)-2-(3-chloro­phen­yl)-1,3-thia­zolidine-4-carb­oxy­lic acid monohydrate

In the title compound, C15H18ClNO4S·H2O, the thia­zolidine ring displays a half-chair conformation. In the crystal, the water mol­ecules are linked to the organic acid mol­ecules via inter­molecular O—H⋯O hydrogen bonds

Serotonin-mediated modulation of Na+/K+ pump current in rat hippocampal CA1 pyramidal neurons

<p>Abstract</p> <p>Background</p> <p>The aim of this study was to investigate whether serotonin (5-hydroxytryptamine, 5-HT) can modulate Na⁺/K⁺pump in rat hippocampal CA1 pyramidal neurons.</p> <p>Results</p> <p>5-HT (0.1, 1 mM) showed Na⁺/K⁺pump current (Ip) densities of 0.40 ± 0.04, 0.34 ± 0.03 pA/pF contrast to 0.63 ± 0.04 pA/pF of the control of 0.5 mM strophanthidin (Str), demonstrating 5-HT-induced inhibition of Ip in a dose-dependent manner in hippocampal CA1 pyramidal neurons. The effect was partly attenuated by ondasetron, a 5-HT₃receptor (5-HT₃R) antagonist, not by WAY100635, a 5-HT_1AR antagonist, while 1-(3-Chlorophenyl) biguanide hydrochloride (m-CPBG), a 5-HT₃R specific agonist, mimicked the effect of 5-HT on Ip.</p> <p>Conclusion</p> <p>5-HT inhibits neuronal Na⁺/K⁺pump activity via 5-HT₃R in rat hippocampal CA1 pyramidal neurons. This discloses novel mechanisms for the function of 5-HT in learning and memory, which may be a useful target to benefit these patients with cognitive disorder.</p

Datamator : an authoring tool for creating datamations via data query decomposition

Datamation is designed to animate an analysis pipeline step by step, serving as an intuitive and efficient method for interpreting data analysis outcomes and facilitating easy sharing with others. However, the creation of a datamation is a difficult task that demands expertise in diverse skills. To simplify this task, we introduce Datamator, a language-oriented authoring tool developed to support datamation generation. In this system, we develop a data query analyzer that enables users to generate an initial datamation effortlessly by inputting a data question in natural language. Then, the datamation is displayed in an interactive editor that affords users the ability to both edit the analysis progression and delve into the specifics of each step undertaken. Notably, the Datamator incorporates a novel calibration network that is able to optimize the outputs of the query decomposition network using a small amount of user feedback. To demonstrate the effectiveness of Datamator, we conduct a series of evaluations including performance validation, a controlled user study, and expert interviews.NSFCNSF ShanghaiDeutsche Forschungsgemeinschaf

Multicolor plate reader fluorescence calibration

This is a pre-copyedited, author-produced version of an article accepted for publication in Synthetic Biology following peer review. The version of record Jacob Beal, Cheryl A Telmer, Alejandro Vignoni, Yadira Boada, Geoff S Baldwin, Liam Hallett, Taeyang Lee, Vinoo Selvarajah, Sonja Billerbeck, Bradley Brown, Guo-nan Cai, Liang Cai, Edward Eisenstein, Daisuke Kiga, David Ross, Nina Alperovich, Noah Sprent, Jaclyn Thompson, Eric M Young, Drew Endy, Traci Haddock-Angelli, Multicolor plate reader fluorescence calibration, Synthetic Biology, Volume 7, Issue 1, 2022, ysac010, https://doi.org/10.1093/synbio/ysac010, is available online at: https://doi.org/10.1093/synbio/ysac010.[EN] Plate readers are commonly used to measure cell growth and fluorescence, yet the utility and reproducibility of plate reader data is limited by the fact that it is typically reported in arbitrary or relative units. We have previously established a robust serial dilution protocol for calibration of plate reader measurements of absorbance to estimated bacterial cell count and for green fluorescence from proteins expressed in bacterial cells to molecules of equivalent fluorescein. We now extend these protocols to calibration of red fluorescence to the sulforhodamine-101 fluorescent dye and blue fluorescence to Cascade Blue. Evaluating calibration efficacy via an interlaboratory study, we find that these calibrants do indeed provide comparable precision to the prior calibrants and that they enable effective cross-laboratory comparison of measurements of red and blue fluorescence from proteins expressed in bacterial cells.This work was supported in part by the following funding sources: J.B. was supported by Air Force Research Laboratory (AFRL) and DARPA contract FA8750-17-C-0184. N.S. was supported by funding from the BBSRC under award BB/M011178/1. G.B., L.H., and T.L. were supported by the EPSRC under award EP/R034915/1 and EP/S022856/1. G.C. and L.C. were supported by funds from YF Capital and the National Top Talent Undergraduate Training Program, China. A.V. and Y.B. were funded by Grant MINECO/AEI, EU DPI2017-82896-C2-1-R and MCIN/AEI/10.13039/501100011033 grant number PID2020117271RB-C21. Y.B. was supported by Secretaria de Educaci ' on Superior, Ciencia, Tecnologia e Innovacion-Ecuador (Scholarship Convocatoria Abierta 2011). D.K. was supported by JST, CREST Grant Number JPMJCR21N4, Japan. E.Y. was supported by the National Science Foundation under Grant No. 1939860. J.T. was supported by the Office of the Director of National Intelligence (ODNI), Intelligence Advanced Research Projects Activity (IARPA) under Finding Engineering Linked Indicators (FELIX) program contract N66001-18-C-4507. This document does not contain technology or technical data controlled under either the U.S. International Traffic in Arms Regulations or the U.S. Export Administration Regulations. Views, opinions, and/or findings expressed are those of the author(s) and should not be interpreted as representing the official views or policies of the Department of Defense or the U.S. Government.Beal, J.; Telmer, CA.; Vignoni, A.; Boada-Acosta, YF.; Baldwin, GS.; Hallett, L.; Lee, T.... (2022). Multicolor plate reader fluorescence calibration. Synthetic Biology. 7(1):1-9. https://doi.org/10.1093/synbio/ysac010197

Integrative epigenome profiling of 47XXY provides insights into whole genomic DNA hypermethylation and active chromatin accessibility

Klinefelter syndrome (KS, 47XXY) is a disorder characterized by sex chromosomal aneuploidy, which may lead to changes in epigenetic regulations of gene expression. To define epigenetic architectures in 47XXY, we annotated DNA methylation in euploid males (46XY) and females (46XX), and 47XXY individuals using whole genome bisulfite sequencing (WGBS) and integrated chromatin accessbilty, and detected abnormal hypermethylation in 47XXY. Furthermore, we detected altered chromatin accessibility in 47XXY, in particular in chromosome X, using Assay for Transposase-Accessible Chromatin sequencing (ATAC-seq) in cultured amniotic cells. Our results construct the whole genome-wide DNA methylation map in 47XXY, and provide new insights into the early epigenomic dysregulation resulting from an extra chromosome X in 47XXY

Vector competence evaluation of mosquitoes for Tahyna virus PJ01 strain, a new Orthobunyavirus in China

IntroductionTahyna virus (TAHV), an arbovirus of the genus Orthobunyavirus, is a cause of human diseases and less studied worldwide. In this study, a new strain of TAHV was isolated from Aedes sp. mosquitoes collected in Panjin city, Liaoning province. However, the competent vector of TAHV in China is still unknown.MethodsThe genome of newly isolated TAHV was sequenced and phylogenetic analysis is performed. Aedes albopictus and Culex pipiens pallens were orally infected with artificial virus blood meals (1:1 of virus suspension and mouse blood), the virus was detected in the midgut, ovary, salivary gland and saliva of the mosquitoes. Then, the transmission and dissemination rates, vertical transmission and horizontal transmission of the virus by the mosquitoes were assessed.ResultsPhylogenetic analysis revealed that the virus shared high similarity with TAHV and was named the TAHV PJ01 strain. After oral infection with virus blood meals, Ae. albopictus showed positive for the virus in all tested tissues with an extrinsic incubation period of 2 days and a fluctuating increasement of transmission and dissemination rates. Whereas no virus was detected in the saliva of Cx. pipiens pallens. Suckling mice bitten by infectious Ae. albopictus developed obvious neurological symptoms, including inactivity, hind-leg paralysis and difficulty turning over, when the virus titer reached 1.70×105 PFU/mL in the brain. Moreover, TAHV was detected in the eggs, larvae and adults of F1 offspring of Ae. albopictus.DiscussionAe. albopictus is an efficient vector to transmit TAHV but Cx. pipiens pallens is not. Ae. albopictus is also a reservoir host that transmits the virus vertically, which further increases the risk of outbreaks. This study has important epidemiological implications for the surveillance of pathogenic viruses in China and guiding comprehensive vector control strategies to counteract potential outbreaks in future

Repetitive transcranial magnetic stimulation of the dorsolateral prefrontal cortex modulates electroencephalographic functional connectivity in Alzheimer’s disease

Background: Increasing evidence demonstrates that repetitive transcranial magnetic stimulation (rTMS) treatment of the dorsolateral prefrontal cortex is beneficial for improving cognitive function in patients with Alzheimer’s disease (AD); however, the underlying mechanism of its therapeutic effect remains unclear. Objectives/Hypothesis: The aim of this study was to investigate the impact of rTMS to the dorsolateral prefrontal cortex on functional connectivity along with treatment response in AD patients with different severity of cognitive impairment. Methods: We conducted a 2-week treatment course of 10-Hz rTMS over the left dorsolateral prefrontal cortex in 23 patients with AD who were split into the mild or moderate cognitive impairment subgroup. Resting state electroencephalography and general cognition was assessed before and after rTMS. Power envelope connectivity was used to calculate functional connectivity at the source level. The functional connectivity of AD patients and 11 cognitively normal individuals was compared. Results: Power envelope connectivity was higher in the delta and theta bands but lower in the beta band in the moderate cognitive impairment group, compared to the cognitively normal controls, at baseline (p < 0.05). The mild cognitive impairment group had no significant abnormities. Montreal Cognitive Assessment scores improved after rTMS in the moderate and mild cognitive impairment groups. Power envelope connectivity in the beta band post-rTMS was increased in the moderate group (p < 0.05) but not in the mild group. No significant changes in the delta and theta band were found after rTMS in both the moderate and mild group. Conclusion: High-frequency rTMS to the dorsolateral prefrontal cortex modulates electroencephalographic functional connectivity while improving cognitive function in patients with AD. Increased beta connectivity may have an important mechanistic role in rTMS therapeutic effects.Yi Guo, Ge Dang, Brenton Hordacre, Xiaolin Su, Nan Yan, Siyan Chen, Huixia Ren, Xue Shi, Min Cai, Sirui Zhang and Xiaoyong La

Cosmological evolution of interacting phantom (quintessence) model in Loop Quantum Gravity

The dynamics of interacting dark energy model in loop quantum cosmology (LQC) is studied in this paper. The dark energy has a constant equation of state $w_x$ and interacts with dark matter through a form $3cH(\rho_x+\rho_m)$. We find for quintessence model ($w_x>-1$) the cosmological evolution in LQC is the same as that in classical Einstein cosmology; whereas for phantom dark energy ($w_x<-1$), although there are the same critical points in LQC and classical Einstein cosmology, loop quantum effect reduces significantly the parameter spacetime ($c, w_x$) required by stability. If parameters $c$ and $w_x$ satisfy the conditions that the critical points are existent and stable, the universe will enter an era dominated by dark energy and dark matter with a constant energy ratio between them, and accelerate forever; otherwise it will enter an oscillatory regime. Comparing our results with the observations we find at $1\sigma$ confidence level the universe will accelerate forever.Comment: 15 pages, 8 figures, to appear in JCA