30 research outputs found

    Functional diversity for REST (NRSF) is defined by in vivo binding affinity hierarchies at the DNA sequence level

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    The molecular events that contribute to, and result from, the in vivo binding of transcription factors to their cognate DNA sequence motifs in mammalian genomes are poorly understood. We demonstrate that variations within the DNA sequence motifs that bind the transcriptional repressor REST (NRSF) encode in vivo DNA binding affinity hierarchies that contribute to regulatory function during lineage-specific and developmental programs in fundamental ways. First, canonical sequence motifs for REST facilitate strong REST binding and control functional classes of REST targets that are common to all cell types, whilst atypical motifs participate in weak interactions and control those targets, which are cell- or tissue-specific. Second, variations in REST binding relate directly to variations in expression and chromatin configurations of REST's target genes. Third, REST clearance from its binding sites is also associated with variations in the RE1 motif. Finally, and most surprisingly, weak REST binding sites reside in DNA sequences that show the highest levels of constraint through evolution, thus facilitating their roles in maintaining tissue-specific functions. These relationships have never been reported in mammalian systems for any transcription factor

    Observations on monosex culture of redclaw crayfish Cherax quadricarinatus von Martens (Decapoda: Parastacidae) in earthen ponds

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    Manual sexing of redclaw crayfish Cherar quadricurinatus was undertaken to evaluate the feasibility of monosex culture and to establish growth and yield characteristics of single sex populations. Although the all-male population exhibited greater mean weight after 10 mo of growout, all-female and mixed sex populations achieved greater total yields due to significant juvenile recruitment. Commercial cultivation of all-male populations would be advantageous as in-pond reproduction is greatly abated, growth is superior and marketable yield is higher. Apparent sexual lability of juveniles combined with the laborious nature of manual sexing may render manual sexing unsuitable for commercial applications
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