17,734 research outputs found
Nitrogen Induced Ferromagnetism In Cobalt Doped BaTiO3
The electronic structure and magnetism of Cobalt doped BaTiO3 (BaTi1-xCoxO3) is investigated. Substitutional Nitrogen on an Oxygen site is found to play an important role in inducing net magnetic moments in the system. The presence of a Nitrogen atom as nearest neighbour to a Cobalt atom is crucial in producing spin splitting of both the Nitrogen and Cobalt states thereby introducing a net local magnetic moment. The introduction of Nitrogen is further found to enhance ferromagnetic interactions between Cobalt atoms. Copyright 2012 Author(s). This article is distributed under a Creative Commons Attribution 3.0 Unported License. [http://dx.doi.org/10.1063/1.4747820]Physic
Unraveling the Catalytic Mechanism of Nitrile Hydratases
To elucidate a detailed catalytic mechanism for nitrile hydratases (NHases), the pH and temperature dependence of the kinetic constants kcat and Km for the cobalt-type NHase from Pseudonocardia thermophila JCM 3095 (PtNHase) were examined. PtNHase was found to exhibit a bell-shaped curve for plots of relative activity versus pH at pH 3.2–11 and was found to display maximal activity between pH 7.2 and 7.8. Fits of these data provided pKES1 and pKES2 values of 5.9 ± 0.1 and 9.2 ± 0.1 (kcat′ = 130 ± 1 s-1), respectively, and pKE1 and pKE2 values of 5.8 ± 0.1 and 9.1 ± 0.1 (kcat′/Km′ = (6.5 ± 0.1) × 103 s-1 mm-1), respectively. Proton inventory studies indicated that two protons are transferred in the rate-limiting step of the reaction at pH 7.6. Because PtNHase is stable at 60 °C, an Arrhenius plot was constructed by plotting ln(kcat) versus 1/T, providing Ea = 23.0 ± 1.2 kJ/mol. The thermal stability of PtNHase also allowed ΔH0 ionization values to be determined, thus helping to identify the ionizing groups exhibiting the pKES1 and pKES2 values. Based on ΔH0ion data, pKES1 is assigned to βTyr68, whereas pKES2 is assigned to βArg52, βArg157, or αSer112 (NHases are α2β2-heterotetramers). A combination of these data with those previously reported for NHases and synthetic model complexes, along with sequence comparisons of both iron- and cobalt-type NHases, allowed a novel catalytic mechanism for NHases to be proposed
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Revisiting lagrange relaxation (LR) for processing large-scale mixed integer programming (MIP) problems
Lagrangean Relaxation has been successfully applied to process many well known
instances of NP-hard Mixed Integer Programming problems. In this paper we present
a Lagrangean Relaxation based generic solver for processing Mixed Integer
Programming problems. We choose the constraints, which are relaxed using a
constraint classification scheme. The tactical issue of updating the Lagrange
multiplier is addressed through sub-gradient optimisation; alternative rules for
updating their values are investigated. The Lagrangean relaxation provides a lower
bound to the original problem and the upper bound is calculated using a heuristic
technique. The bounds obtained by the Lagrangean Relaxation based generic solver
were used to warm-start the Branch and Bound algorithm; the performance of the
generic solver and the effect of the alternative control settings are reported for a wide
class of benchmark models. Finally, we present an alternative technique to calculate
the upper bound, using a genetic algorithm that benefits from the mathematical
structure of the constraints. The performance of the genetic algorithm is also
presented
Mutation of H63 and its Catalytic Affect on the Methionine Aminopeptidase from \u3cem\u3eEscherichia coli\u3c/em\u3e
In order to gain insight into the mechanistic role of a flexible exterior loop near the active site, made up of Y62, H63, G64, and Y65, that has been proposed to play an important role in substrate binding and recognition in the methionyl aminopeptidase from Escherichia coli (EcMetAP-I), the H63A enzyme was prepared. Mutation of H63 to alanine does not affect the ability of the enzyme to bind divalent metal ions. The specific activity of H63A EcMetAP-I was determined using four different substrates of varying lengths, namely, l-Met-p-NA, MAS, MGMM and MSSHRWDW. For the smallest/shortest substrate (l-Met-p-NA) the specific activity decreased nearly seven fold but as the peptide length increased, the specific activity also increased and became comparable to WT EcMetAP-I. This decrease in specific activity is primarily due to a decrease in the observed kcat values, which decreases nearly sixty-fold for l-Met-p-NA while only a four-fold decrease is observed for the tri- and tetra-peptide substrates. Interestingly, no change in kcat was observed when the octa-peptide MSSHRWDW was used as a substrate. These data suggest that H63 affects the hydrolysis of small peptide substrates whereas large peptides can overcome the observed loss in binding energy, as predicted from Km values, by additional hydrophilic and hydrophobic interactions
Superfluid and Fermi liquid phases of Bose-Fermi mixtures in optical lattices
We describe interacting mixtures of ultracold bosonic and fermionic atoms in
harmonically confined optical lattices. For a suitable choice of parameters we
study the emergence of superfluid and Fermi liquid (non-insulating) regions out
of Bose-Mott and Fermi-band insulators, due to finite Boson and Fermion
hopping. We obtain the shell structure for the system and show that angular
momentum can be transferred to the non-insulating regions from
Laguerre-Gaussian beams, which combined with Bragg spectroscopy can reveal all
superfluid and Fermi liquid shells.Comment: 4 pages, 2 figure
Nonequilibrium dynamics in a two-channel Kondo system due to a quantum quench
Recent experiments by Potok et al. have demonstrated a remarkable tunability
between a single-channel Fermi liquid fixed point and a two-channel non-Fermi
liquid fixed point. Motivated by this we study the nonequilibrium dynamics due
to a sudden quench of the parameters of a Hamiltonian from a single-channel to
a two-channel anisotropic Kondo system. We find a distinct difference between
the long time behavior of local quantities related to the impurity spin as
compared to that of bulk quantities related to the total (conduction electrons
+ impurity) spin of the system. In particular, the local impurity spin and the
local spin susceptibility are found to equilibrate, but in a very slow
power-law fashion which is peculiar to the non-Fermi liquid properties of the
Hamiltonian. In contrast, we find a lack of equilibration in the two particle
expectation values related to the total spin of the system.Comment: 5 pages, 1 fig. Accepted in PR
Multibaseline gravitational wave radiometry
We present a statistic for the detection of stochastic gravitational wave
backgrounds (SGWBs) using radiometry with a network of multiple baselines. We
also quantitatively compare the sensitivities of existing baselines and their
network to SGWBs. We assess how the measurement accuracy of signal parameters,
e.g., the sky position of a localized source, can improve when using a network
of baselines, as compared to any of the single participating baselines. The
search statistic itself is derived from the likelihood ratio of the cross
correlation of the data across all possible baselines in a detector network and
is optimal in Gaussian noise. Specifically, it is the likelihood ratio
maximized over the strength of the SGWB, and is called the maximized-likelihood
ratio (MLR). One of the main advantages of using the MLR over past search
strategies for inferring the presence or absence of a signal is that the former
does not require the deconvolution of the cross correlation statistic.
Therefore, it does not suffer from errors inherent to the deconvolution
procedure and is especially useful for detecting weak sources. In the limit of
a single baseline, it reduces to the detection statistic studied by Ballmer
[Class. Quant. Grav. 23, S179 (2006)] and Mitra et al. [Phys. Rev. D 77, 042002
(2008)]. Unlike past studies, here the MLR statistic enables us to compare
quantitatively the performances of a variety of baselines searching for a SGWB
signal in (simulated) data. Although we use simulated noise and SGWB signals
for making these comparisons, our method can be straightforwardly applied on
real data.Comment: 17 pages and 19 figure
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