Redmond Red as a Redox Probe for the DNA-Mediated Detection of Abasic Sites

Redmond Red, a fluoropore containing a redox-active phenoxazine core, has been explored as a new electrochemical probe for the detection of abasic sites in double-stranded DNA. The electrochemical behavior of Redmond Red-modified DNA at gold surfaces exhibits stable, quasi-reversible voltammetry with a midpoint potential centered around −50 mV versus NHE. Importantly, with Redmond Red positioned opposite an abasic site within the DNA duplex, the electrochemical response is significantly enhanced compared to Redmond Red positioned across from a base. Redmond Red, reporting only if well-stacked in the duplex, represents a sensitive probe to detect abasic sites electrochemically in a DNA-mediated reaction

DNA-Mediated Electrochemistry

The base pair stack of DNA has been demonstrated as a medium for long-range charge transport chemistry both in solution and at DNA-modified surfaces. This chemistry is exquisitely sensitive to structural perturbations in the base pair stack as occur with lesions, single base mismatches, and protein binding. We have exploited this sensitivity for the development of reliable electrochemical assays based on DNA charge transport at self-assembled DNA monolayers. Here, we discuss the characteristic features, applications, and advantages of DNA-mediated electrochemistry

Electrochemical applications of room temperature ionic liquids

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Structural Fire Design of Unprotected Steel Beams Supporting Composite Floor Slabs

The electrochemical windows of acetonitrile solutions doped with 0.1 M concentrations of several ionic liquids were examined by cyclic voltammetry at gold and platinum microelectrodes. These results were compared with those observed in the commonly used 0.1 M tetrabutylammonium perchlorate/acetonitrile system as well as with neat ionic liquids. The use of a trifluorotris(pentafluoroethyl)phosphate-based ionic liquid, specifically, as supporting electrolyte in acetonitrile solutions affords a wider anodic window, which is attributed to the high stability of the anionic component of these intrinsically conductive and thermally robust compounds

Electrochemical Behavior of Cytochrome <i>c</i>₅₅₂ from a Psychrophilic Microorganism

Psychrophilic organisms play a significant role in global nutrient cycling and bioremediation, and thus there is great interest in understanding the details of their cellular processes. Here, we report the first electrochemical measurements of cytochrome <i>c</i>₅₅₂ isolated from the model psychrophile, <i>Colwellia psychrerythraea</i>. Quasi-reversible redox behavior is observed at thiol-modified and bare gold electrodes with midpoint potentials of 247 and 277 mV vs SHE, respectively. Comparison of the voltammetric response on the two substrates illustrates the need for a modified surface to direct protein orientation and facilitate electron transfer in a reproducible manner. Temperature-dependence measurements of the current profile illustrate the protein’s ability to participate in electron transfer reactions over a 50° range, which is supported by recent structural evidence of enhanced flexibility. These electrochemical findings allow the behavior of this psychrophilic cytochrome to be evaluated in the context of meso- and thermophilic electron transfer proteins

Determination of ammonia based on the electro-oxidation of hydroquinone in dimethylformamide or in the room temperature ionic liquid, 1-ethyl-3- methylimidazolium bis(trifluoromethylsulfonyl)imide

The results detail a novel methodology for the electrochemical determination of ammonia based on its interaction with hydroquinone in DMF. It has been shown that ammonia reversibly removes protons from the hydroquinone molecules, thus facilitating the oxidative process with the emergence of a new wave at less positive potentials. The analytical utility of the proposed methodology has been examined with a linear range from 10 to 95ppm and corresponding limit-of-detection of 4.2ppm achievable. Finally, the response of hydroquinone in the presence of ammonia has been examined in the room temperature ionic liquid 1-ethyl-3-methylimidazolium bis(trifluormethylsulfonyl) imide, [EMIM][N(Tf)2]. Analogous voltammetric waveshapes to that observed in DMF were obtained, thereby confirming the viability of the method in either DMF or [EMIM][N(Tf)2] as solvent.</p

Voltammetry of oxygen in the room-temperature ionic liquids 1-ethyl-3-methylimidazolium bis((trifluoromethyl)sulfonyl)imide and hexyltriethylammonium bis((trifluoromethyl)sulfonyl)imide:One-electron reduction to form superoxide. Steady-state and transient behavior in the same cyclic voltammogram resulting from widely different diffusion coefficients of oxygen and superoxide

The electrochemical reduction of oxygen in two different room-temperature ionic liquids, 1-ethyl-3-methylimidazolium bis((trifluoromethyl)sulfonyl)imide ([EMIM][N(Tf)2]) and hexyltriethylammonium bis-((trifluoromethyl)sulfonyl)imide ([N6222][N(Tf)2]) was investigated by cyclic voltammetry at a gold microdisk electrode. Chronoamperometric measurements were made to determine the diffusion coefficient, D, and concentration, c, of the electroactive oxygen dissolved in the ionic liquid by fitting experimental transients to the Aoki model. [Aoki, K.; et al. J. Electroanal. Chem. 1981, 122, 19]. A theory and simulation designed for cyclic voltammetry at microdisk electrodes was then employed to determine the diffusion coefficient of the electrogenerated superoxide species, O2 ·-, as well as compute theoretical voltammograms to confirm the values of D and c for neutral oxygen obtained from the transients. As expected, the diffusion coefficient of the superoxide species was found to be smaller than that of the oxygen in both ionic liquids. The diffusion coefficients of O2 and O2 ·- in [N6222][N(Tf)2], however, differ by more than a factor of 30 (DO2 = 1.48 × 10-10 m2 s-1, DO2 ·- = 4.66 × 10-12 m2 s-1), whereas they fall within the same order of magnitude in [EMIM]-[N(Tf)2] (DO2 = 7.3 × 10-10 m2 s-1, DO2 ·- = 2.7 × 10-10 m2 s-1). This difference in [N6222][N(Tf)2] causes pronounced asymmetry in the concentration distributions of oxygen and superoxide, resulting in significant differences in the heights of the forward and back peaks in the cyclic voltammograms for the reduction of oxygen. This observation is most likely a result of the higher viscosity of [N6222][N(Tf)2] in comparison to [EMIM][N(Tf)2], due to the structural differences in cationic component.</p