Eddy covariance flux errors due to random and systematic timing errors during data acquisition

Modern eddy covariance (EC) systems collect high-frequency data (10–20 Hz) via digital outputs of instruments. This is an important evolution with respect to the traditional and widely used mixed analog/digital systems, as fully digital systems help overcome the traditional limitations of transmission reliability, data quality, and completeness of the datasets. However, fully digital acquisition introduces a new problem for guaranteeing data synchronicity when the clocks of the involved devices themselves cannot be synchronized, which is often the case with instruments providing data via serial or Ethernet connectivity in a streaming mode. In this paper, we suggest that, when assembling EC systems “inhouse”, aspects related to timing issues need to be carefully considered to avoid significant flux biases. By means of a simulation study, we found that, in most cases, random timing errors can safely be neglected, as they do not impact fluxes significantly. At the same time, systematic timing errors potentially arising in asynchronous systems can effectively act as filters leading to significant flux underestimations, as large as 10 %, by means of attenuation of high-frequency flux contributions. We characterized the transfer function of such “filters” as a function of the error magnitude and found cutoff frequencies as low as 1 Hz, implying that synchronization errors can dominate high-frequency attenuations in open- and enclosed-path EC systems. In most cases, such timing errors neither be detected nor characterized a posteriori. Therefore, it is important to test the ability of traditional and prospective EC data logging systems to assure the required synchronicity and propose a procedure to implement such a test relying on readily available equipment

Eddy covariance flux errors due to random and systematic timing errors during data acquisition

Modern eddy covariance (EC) systems collect high-frequency data (10–20 Hz) via digital outputs of instruments. This is an important evolution with respect to the traditional and widely used mixed analog/digital systems, as fully digital systems help overcome the traditional limitations of transmission reliability, data quality, and completeness of the datasets. However, fully digital acquisition introduces a new problem for guaranteeing data synchronicity when the clocks of the involved devices themselves cannot be synchronized, which is often the case with instruments providing data via serial or Ethernet connectivity in a streaming mode. In this paper, we suggest that, when assembling EC systems “inhouse”, aspects related to timing issues need to be carefully considered to avoid significant flux biases. By means of a simulation study, we found that, in most cases, random timing errors can safely be neglected, as they do not impact fluxes significantly. At the same time, systematic timing errors potentially arising in asynchronous systems can effectively act as filters leading to significant flux underestimations, as large as 10 %, by means of attenuation of high-frequency flux contributions. We characterized the transfer function of such “filters” as a function of the error magnitude and found cutoff frequencies as low as 1 Hz, implying that synchronization errors can dominate high-frequency attenuations in open- and enclosed-path EC systems. In most cases, such timing errors neither be detected nor characterized a posteriori. Therefore, it is important to test the ability of traditional and prospective EC data logging systems to assure the required synchronicity and propose a procedure to implement such a test relying on readily available equipment

Final Scientific/Technical Report. A closed path methane and water vapor gas analyzer

Robust, economical, low-power and reliable closed-path methane (CH4), carbon dioxide (CO2), and water vapor (H2O) analyzers suitable for long-term measurements are not readily available commercially. Such analyzers are essential for quantifying the amount of CH4 and CO2 released from various ecosystems (wetlands, rice paddies, forests, etc.) and other surface contexts (e.g. landfills, animal husbandry lots, etc.), and for understanding the dynamics of the atmospheric CH4 and CO2 budget and their impact on climate change and global warming. The purpose of this project is to develop a closed-path methane, carbon dioxide gas and water vapor analyzer capable of long-term measurements in remote areas for global climate change and environmental research. The analyzer will be capable of being deployed over a wide range of ecosystems to understand methane and carbon dioxide exchange between the atmosphere and the surface. Measurements of methane and carbon dioxide exchange need to be made all year-round with limited maintenance requirements. During this Phase II effort, we successfully completed the design of the electronics, optical bench, trace gas detection method and mechanical infrastructure. We are using the technologies of two vertical cavity surface emitting lasers, a multiple-pass Herriott optical cell, wavelength modulation spectroscopy and direct absorption to measure methane, carbon dioxide, and water vapor. We also have designed the instrument application software, Field Programmable Gate Array (FPGA), along with partial completion of the embedded software. The optical bench has been tested in a lab setting with very good results. Major sources of optical noise have been identified and through design, the optical noise floor is approaching -60dB. Both laser modules can be temperature controlled to help maximize the stability of the analyzer. Additionally, a piezo electric transducer has been utilized to randomize the noise introduced from potential etalons. It is expected that all original specifications contained within the initial proposal will be met. We are currently in the beginning stages of assembling the first generation prototypes and finalizing the remaining design elements. The first prototypes will initially be tested in our environmental calibration chamber in which specific gas concentrations, temperature and humidity levels can be controlled. Once operation in this controlled setting is verified, the prototypes will be deployed at LI-CORâÃÂÃÂs Experimental Research Station (LERS). Deployment at the LERS site will test the instrumentâÃÂÃÂs robustness in a real-world situation