Adaptation kinetics in bacterial chemotaxis

Cells of Escherichia coli, tethered to glass by a single flagellum, were subjected to constant flow of a medium containing the attractant alpha-methyl-DL-aspartate. The concentration of this chemical was varied with a programmable mixing apparatus over a range spanning the dissociation constant of the chemoreceptor at rates comparable to those experienced by cells swimming in spatial gradients. When an exponentially increasing ramp was turned on (a ramp that increases the chemoreceptor occupancy linearly), the rotational bias of the cells (the fraction of time spent spinning counterclockwise) changed rapidly to a higher stable level, which persisted for the duration of the ramp. The change in bias increased with ramp rate, i.e., with the time rate of change of chemoreceptor occupancy. This behavior can be accounted for by a model for adaptation involving proportional control, in which the flagellar motors respond to an error signal proportional to the difference between the current occupancy and the occupancy averaged over the recent past. Distributions of clockwise and counterclockwise rotation intervals were found to be exponential. This result cannot be explained by a response regular model in which transitions between rotational states are generated by threshold crossings of a regular subject to statistical fluctuation; this mechanism generates distributions with far too many long events. However, the data can be fit by a model in which transitions between rotational states are governed by first-order rate constants. The error signal acts as a bias regulator, controlling the values of these constants

Coordination of flagella on filamentous cells of Escherichia coli

Video techniques were used to study the coordination of different flagella on single filamentous cells of Escherichia coli. Filamentous, nonseptate cells were produced by introducing a cell division mutation into a strain that was polyhook but otherwise wild type for chemotaxis. Markers for its flagellar motors (ordinary polyhook cells that had been fixed with glutaraldehyde) were attached with antihook antibodies. The markers were driven alternately clockwise and counterclockwise, at angular velocities comparable to those observed when wild-type cells are tethered to glass. The directions of rotation of different markers on the same cell were not correlated; reversals of the flagellar motors occurred asynchronously. The bias of the motors (the fraction of time spent spinning counterclockwise) changed with time. Variations in bias were correlated, provided that the motors were within a few micrometers of one another. Thus, although the directions of rotation of flagellar motors are not controlled by a common intracellular signal, their biases are. This signal appears to have a limited range

Consequences of the Factorization Hypothesis in pbar p, pp, gamma p and gamma gamma Collisions

Using an eikonal analysis, we examine the validity of the factorization theorem for nucleon-nucleon, gamma p and gamma gamma collisions. As an example, using the additive quark model and meson vector dominance, we directly show that for all energies and values of the eikonal, that the factorization theorem sigma_{nn}/sigma_{gamma p} = sigma_{gamma p}/sigma_{gamma gamma} holds. We can also compute the survival probability of large rapidity gaps in high energy pbar p and pp collisions. We show that the survival probabilities are identical (at the same energy) for gamma p and gamma gamma collisions, as well as for nucleon-nucleon collisions. We further show that neither the factorization theorem nor the reaction-independence of the survival probabilities depends on the assumption of an additive quark model, but, more generally, depends on the opacity of the eikonal being independent of whether the reaction is n-n, gamma p or gamma gamma.Comment: 8 pages, Revtex, no figures. Expanded discussion, minor correction

Total photoproduction cross-section at very high energy

In this paper we apply to photoproduction total cross-section a model we have proposed for purely hadronic processes and which is based on QCD mini-jets and soft gluon re-summation. We compare the predictions of our model with the HERA data as well as with other models. For cosmic rays, our model predicts substantially higher cross-sections at TeV energies than models based on factorization but lower than models based on mini-jets alone, without soft gluons. We discuss the origin of this difference.Comment: 13 pages, 9 figures. Accepted for publication in EPJC. Changes concern added references, clarifications of the Soft Gluon Resummation method used in the paper, and other changes requested by the Journal referee which do not change the results of the original versio

Small x Behavior of Parton Distributions from the Observed Froissart Energy Dependence of the Deep Inelastic Scattering Cross Section

We fit the reduced cross section for deep-inelastic electron scattering data to a three parameter ln^2 s fit, A + beta ln^2 (s/s_0), where s= [Q^2/x] (1-x) + m^2, and Q^2 is the virtuality of the exchanged photon. Over a wide range in Q^2 (0.11 < Q^2 < 1200 GeV^2) all of the fits satisfy the logarithmic energy dependence of the Froissart bound. We can use these results to extrapolate to very large energies and hence to very small values of Bjorken x -- well beyond the range accessible experimentally. As Q^2 --> infinity, the structure function F_2^p(x, Q^2) exhibits Bjorken scaling, within experimental errors. We obtain new constraints on the behavior of quark and antiquark distribution functions at small x.Comment: 10 pages, 2 figure

Radial HI Profiles at the Periphery of Galactic Disks: The Role of Ionizing Background Radiation

Observations of neutral hydrogen in spiral galaxies reveal a sharp cutoff in the radial density profile at some distance from the center. Using 22 galaxies with known HI distributions as an example, we discuss the question of whether this effect can be associated exclusively with external ionizing radiation, as is commonly assumed. We show that before the surface density reaches $\sigma_{\textrm{HI}}\le 0.5 {\cal M}_\odot/{\textrm {pc}}^2$(the same for galaxies of different types), it is hard to expect the gas to be fully ionized by background radiation. For two of 13 galaxies with a sharp drop in the HI profile, the "steepening" can actually be caused by ionization. At the same time, for the remaining galaxies, the observed cutoff in the radial HI profile is closer to the center than if it was a consequence of ionization by background radiation and, therefore, it should be caused by other factors.Comment: 15 pages, 6 figure

A Lie algebra that can be written as a sum of two nilpotent subalgebras, is solvable

This is an old paper put here for archeological purposes. It is proved that a finite-dimensional Lie algebra over a field of characteristic p>5, that can be written as a vector space (not necessarily direct) sum of two nilpotent subalgebras, is solvable. The same result (but covering also the cases of low characteristics) was established independently by V. Panyukov (Russ. Math. Surv. 45 (1990), N4, 181-182), and the homological methods utilized in the proof were developed later in arXiv:math/0204004. Many inaccuracies in the English translation are corrected, otherwise the text is identical to the published version.Comment: v2: minor change

New physics, the cosmic ray spectrum knee, and pppp cross section measurements

We explore the possibility that a new physics interaction can provide an explanation for the knee just above $10^6$ GeV in the cosmic ray spectrum. We model the new physics modifications to the total proton-proton cross section with an incoherent term that allows for missing energy above the scale of new physics. We add the constraint that the new physics must also be consistent with published $pp$ cross section measurements, using cosmic ray observations, an order of magnitude and more above the knee. We find that the rise in cross section required at energies above the knee is radical. The increase in cross section suggests that it may be more appropriate to treat the scattering process in the black disc limit at such high energies. In this case there may be no clean separation between the standard model and new physics contributions to the total cross section. We model the missing energy in this limit and find a good fit to the Tibet III cosmic ray flux data. We comment on testing the new physics proposal for the cosmic ray knee at the Large Hadron Collider.Comment: 17 pages, 4 figure