The NASA-IGES geometry data visualizer

NIGESview, an interactive software tool for reading, viewing, and translating geometry data available in the Initial Graphics Exchange Specification (IGES) format, is described. NIGESview is designed to read a variety of IGES entities, translate some of the entities, graphically view the data, and output a file in a specific IGES format. The software provides a modern graphical user interface and is designed in a modular fashion so developers can utilize all or part of the code in their grid generation software for computational fluid dynamics

Measuring H0 from the 6dF Galaxy Survey and future low-redshift surveys

Baryon acoustic oscillations (BAO) at low redshift provide a precise and largely model-independent way to measure the Hubble constant, H0. The 6dF Galaxy Survey measurement of the BAO scale gives a value of H0 = 67 +/- 3.2 km/s/Mpc, achieving a 1-sigma precision of 5%. With improved analysis techniques, the planned WALLABY (HI) and TAIPAN (optical) redshift surveys are predicted to measure H0 to 1-3% precision.Comment: Proceedings of IAU Symposium 289, "Advancing the Physics of Cosmic Distances", Richard de Grijs & Giuseppe Bono (eds), 2012, 4p

Topological Symmetry Groups of Complete Bipartite Graphs

The symmetries of complex molecular structures can be modeled by the {\em topological symmetry group} of the underlying embedded graph. It is therefore important to understand which topological symmetry groups can be realized by particular abstract graphs. This question has been answered for complete graphs; it is natural next to consider complete bipartite graphs. In previous work we classified the complete bipartite graphs that can realize topological symmetry groups isomorphic to $A_4$, $S_4$ or $A_5$; in this paper we determine which complete bipartite graphs have an embedding in $S^3$ whose topological symmetry group is isomorphic to $\mathbb{Z}_m$, $D_m$, $\mathbb{Z}_r \times \mathbb{Z}_s$ or $(\mathbb{Z}_r \times \mathbb{Z}_s) \ltimes \mathbb{Z}_2$.Comment: 26 pages, minor revisions; this is the final version accepted by Tokyo Journal of Mathematic

Measurement of Star-Formation Rate from H-alpha in field galaxies at z=1

We report the results of J-band infrared spectroscopy of a sample of 13 z=1 field galaxies drawn from the Canada-France Redshift Survey, targeting galaxies whose redshifts place the rest frame H-alpha line emission from HII regions in between the bright night sky OH lines. As a result we detect emission down to a flux limit of ~10^{-16} ergs cm^{-2} s^{-1} corresponding to a luminosity limit of ~10^{41} ergs at this redshift for a H_0=50 km s^{-1} Mpc,^{-1} q_0=0.5 cosmology. From these luminosities we derive estimates of the star-formation rates in these galaxies which are independent of previous estimates based upon their rest-frame ultraviolet (2800A) luminosity. The mean star-formation rate at z=1, from this sample, is found to be at least three times as high as the ultraviolet estimates. The standard dust extinction in these galaxies is inferred to be A_V=0.5-1.0 mags, comparable to local field galaxies, suggesting that the bulk of star-formation is not heavily obscured unless one uses greyer extinction laws. Star-forming galaxies have the bluest colours and a preponderance of disturbed/interacting morphologies. We also investigate the effects of particular star-formation histories, in particular the role of bursts vs continuous star-formation in changing the detailed distribution of UV to H-alpha emission. Generally we find that models dominated by short, overlapping, bursts at typically 0.2 Gyr intervals provide a better model for the data than a constant rate of star-formation. The star-formation history of the Universe from Balmer lines is compiled and found to be typically 2--3\times higher than that inferred from the UV {\em at all redshifts}. It can not yet be clearly established whether the star-formation rate falls off or remains constant at high-redshift.Comment: 15 pages including 8 figures. MNRAS in pres

Geographic Distribution and Harvest Dynamics of the Eastern Spotted Skunk in Arkansas

The eastern spotted skunk (Spilogale putorius) is a small carnivore found across much of the central and southeastern United States, and while once common, this species has become rare in most obits range. We used harvest records collected by the Arkansas Game and Fish Commission from 1941-2004 to examine historic and current distribution and long-term harvest dynamics of this species in Arkansas. Eastern spotted skunks have historically been most common in the Ozarks and the Ouachitas though the species appears to have been present, but uncommon, in the Gulf Coastal Plain and in some counties in southeastern Arkansas near the Mississippi River. Annual harvests declined precipitously during the 1940s and 1950s, from \u3e1,800 animals in 1942 t

The 6dF Galaxy Survey: Dependence of halo occupation on stellar mass

In this paper we study the stellar-mass dependence of galaxy clustering in the 6dF Galaxy Survey. The near-infrared selection of 6dFGS allows more reliable stellar mass estimates compared to optical bands used in other galaxy surveys. Using the Halo Occupation Distribution (HOD) model, we investigate the trend of dark matter halo mass and satellite fraction with stellar mass by measuring the projected correlation function, $w_p(r_p)$. We find that the typical halo mass ($M_1$) as well as the satellite power law index ($\alpha$) increase with stellar mass. This indicates, (1) that galaxies with higher stellar mass sit in more massive dark matter halos and (2) that these more massive dark matter halos accumulate satellites faster with growing mass compared to halos occupied by low stellar mass galaxies. Furthermore we find a relation between $M_1$ and the minimum dark matter halo mass ($M_{\rm min}$) of $M_1 \approx 22\,M_{\rm min}$, in agreement with similar findings for SDSS galaxies. The satellite fraction of 6dFGS galaxies declines with increasing stellar mass from 21% at $M_{\rm stellar} = 2.6\times10^{10}h^{-2}\,M_{\odot}$ to 12% at $M_{\rm stellar} = 5.4\times10^{10}h^{-2}\,M_{\odot}$ indicating that high stellar mass galaxies are more likely to be central galaxies. We compare our results to two different semi-analytic models derived from the Millennium Simulation, finding some disagreement. Our results can be used for placing new constraints on semi-analytic models in the future, particularly the behaviour of luminous red satellites. Finally we compare our results to studies of halo occupation using galaxy-galaxy weak lensing. We find good overall agreement, representing a valuable crosscheck for these two different tools of studying the matter distribution in the Universe.Comment: 17 pages, 11 figures. arXiv admin note: text overlap with arXiv:1104.2447 by other author

The NASA-IGES geometry data exchange standard

Described here are the data exchange efforts and plans supported by the NASA Steering Committee for Surface Modeling and Grid Generation. Current methods for geometry data exchange between computer aided design (CAD) systems and NASA computational fluid dynamics (CFD) analysis systems are tedious and induce errors. A Geometry Data Exchange Standard is proposed, utilizing a subset of an existing national standard titled Initial Graphic Exchange Standard (IGES). Future plans for data exchange standardization include all aspects of CFD data. Software systems to utilize this NASA-IGES Geometry Data Exchange Specification are under development

Detection of water vapor in the terrestrial planet forming region of a transition disk

We report a detection of water vapor in the protoplanetary disk around DoAr 44 with the Texas Echelon Cross Echelle Spectrograph --- a visitor instrument on the Gemini north telescope. The DoAr 44 disk consists of an optically thick inner ring and outer disk, separated by a dust-cleared 36 AU gap, and has therefore been termed "pre-transitional". To date, this is the only disk with a large inner gap known to harbor detectable quantities of warm (T=450 K) water vapor. In this work, we detect and spectrally resolve three mid-infrared pure rotational emission lines of water vapor from this source, and use the shapes of the emission lines to constrain the location of the water vapor. We find that the emission originates near 0.3 AU --- the inner disk region. This characteristic region coincides with that inferred for both optically thick and thin thermal infrared dust emission, as well as rovibrational CO emission. The presence of water in the dust-depleted region implies substantial columns of hydrogen (>10^{22} cm-2) as the water vapor would otherwise be destroyed by photodissociation. Combined with the dust modeling, this column implies a gas/small-dust ratio in the optically thin dusty region of >1000. These results demonstrate that DoAr 44 has maintained similar physical and chemical conditions to classical protoplanetary disks in its terrestrial-planet forming regions, in spite of having formed a large gap.Comment: Paper accepted to the Astrophysical Journal Letter

HID-1 controls formation of large dense core vesicles by influencing cargo sorting and trans-Golgi network acidification

Large dense core vesicles (LDCVs) mediate the regulated release of neuropeptides and peptide hormones. They form at the trans-Golgi network (TGN), where their soluble content aggregates to form a dense core, but the mechanisms controlling biogenesis are still not completely understood. Recent studies have implicated the peripheral membrane protein HID-1 in neuropeptide sorting and insulin secretion. Using CRISPR/Cas9, we generated HID-1 KO rat neuroendocrine cells, and we show that the absence of HID-1 results in specific defects in peptide hormone and monoamine storage and regulated secretion. Loss of HID-1 causes a reduction in the number of LDCVs and affects their morphology and biochemical properties, due to impaired cargo sorting and dense core formation. HID-1 KO cells also exhibit defects in TGN acidification together with mislocalization of the Golgi-enriched vacuolar H+-ATPase subunit isoform a2. We propose that HID-1 influences early steps in LDCV formation by controlling dense core formation at the TGN.</jats:p