Design and hardware evaluation of the optical-link system for the ATLAS Liquid Argon Calorimeter Phase-II Upgrade

An optical link system is being developed for the ATLAS Liquid Argon Calorimeter Phase-II upgrade. The optical link system is responsible for transmit the data of over 182 thousand detector channels from 1524 Front-End Boards (FEBs) through 26 optical fibers per FEB over 150 meters to the counting room and brings clocks, bunch crossing reset signals and slow control/monitoring signals back to the FEBs. The optical link system is based on the Low-Power GigaBit Transceivers (lpGBTs) and the Versatile optical Transceiver (VTRx+) modules, which both are being developed for the High-Luminosity LHC upgrade. An evaluation board is designed and the major functions of the optical link system are being evaluated. The design of the optical link system and the evaluation of major functions are presented in the paper.Comment: 12 pages, 8 figure

Two low-power optical data transmission ASICs for the ATLAS Liquid Argon Calorimeter readout upgrade

A serializer ASIC and a VCSEL driver ASIC are needed for the front-end optical data transmission in the ATLAS liquid argon calorimeter readout phase-I upgrade. The baseline ASICs are the serializer LOCx2 and the VCSEL driver LOCld, designed in a 0.25-{\mu}m Silicon-on-Sapphire (SoS) CMOS technology and consumed 843 mW and 320 mW, respectively. Based on a 130-nm CMOS technology, we design two pin-to-pin-compatible backup ASICs, LOCx2-130 and LOCld-130. Their power consumptions are much lower then of their counterparts, whereas other performance, such as the latency, data rate, and radiation tolerance, meet the phase-I upgrade requirements. We present the design of LOCx2-130 and LOCld-130. The test results of LOCx2-130 are also presented.Comment: 12 pages, 12 figure

Optical Data Transmission ASICs for the High-Luminosity LHC (HL-LHC) Experiments

We present the design and test results of two optical data transmission ASICs for the High-Luminosity LHC (HL-LHC) experiments. These ASICs include a two-channel serializer (LOCs2) and a single-channel Vertical Cavity Surface Emitting Laser (VCSEL) driver (LOCld1V2). Both ASICs are fabricated in a commercial 0.25-um Silicon-on-Sapphire (SoS) CMOS technology and operate at a data rate up to 8 Gbps per channel. The power consumption of LOCs2 and LOCld1V2 are 1.25 W and 0.27 W at 8-Gbps data rate, respectively. LOCld1V2 has been verified meeting the radiation-tolerance requirements for HL-LHC experiments.Comment: 9 pages, 12 figure

The 120Gbps VCSEL Array Based Optical Transmitter (ATx) Development for the High-Luminosity LHC (HL-LHC) Experiments

The integration of a Verticle Cavity Surface-Emitting Laser (VCSEL) array and a driving Application-Specific Integrated Circuit (ASIC) in a custom optical array transmitter module (ATx) for operation in the detector front-end is constructed, assembled and tested. The ATx provides 12 parallel channels with each channel operating at 10 Gbps. The optical transmitter eye diagram passes the eye mask and the bit-error rate (BER) less than 1E-12 transmission is achieved at 10 Gbps/ch. The overall insertion loss including the radiation induced attenuation is sufficiently low to meet the proposed link budget requirement.Comment: 10 pages, 9 figure

TNFα signals through specialized factories where responsive coding and miRNA genes are transcribed: Specialized transcription factories

Tumour necrosis factor alpha (TNFα) is a potent cytokine that signals through nuclear factor kappa B (NFκB) to activate a subset of human genes. It is usually assumed that this involves RNA polymerases transcribing responsive genes wherever they might be in the nucleus. Using primary human endothelial cells, variants of chromosome conformation capture (including 4C and chromatin interaction analysis with paired-end tag sequencing), and fluorescence in situ hybridization to detect single nascent transcripts, we show that TNFα induces responsive genes to congregate in discrete ‘NFκB factories'. Some factories further specialize in transcribing responsive genes encoding micro-RNAs that target downregulated mRNAs. We expect all signalling pathways to contain this extra leg, where responding genes are transcribed in analogous specialized factories

The proteomes of transcription factories containing RNA polymerases I, II or III

Human nuclei contain three RNA polymerases (I, II and III) that transcribe different groups of genes; the active forms of all three are difficult to isolate because they are bound to the substructure. Here we describe a purification approach for isolating active RNA polymerase complexes from mammalian cells. After isolation, we analyzed their protein content by mass spectrometry. Each complex represents part of the core of a transcription factory. For example, the RNA polymerase II complex contains subunits unique to RNA polymerase II plus various transcription factors but shares a number of ribonucleoproteins with the other polymerase complexes; it is also rich in polymerase II transcripts. We also describe a native chromosome conformation capture method to confirm that the complexes remain attached to the same pairs of DNA templates found in vivo

Operative Effect Comparison of Flexible Drill Guiding vs. Traditional Drill Guiding Template for Lower Cervical Pedicle Screw Insertion: A Retrospective Analysis

Objective Accurately inserting pedicle screws is the key point of posterior pedicle screw fixation for lower cervical spine (C3–C7) instability. 3D printing technology can improve the accuracy of screw placement. This study compared the safety of 3D‐printed flexible drill guiding template vs. traditional rigid drill guiding template for lower cervical pedicle screw insertion. Methods This was a retrospective study. A total of 34 patients who underwent lower cervical pedicle screw fixation from March 2018 to May 2021 were enrolled in this study, and they were divided into the flexible drill flexible drill group and the traditional drill group. A total of 18 patients in the flexible drill flexible drill group underwent pedicle screw fixation assisted by 3D printed flexible drill guiding templates for the lower cervix, and 16 patients in the traditional drill group underwent pedicle screw fixation assisted by 3D printed regular drill guiding templates for the lower cervix. The length of the incision and intraoperative blood loss during surgery were recorded and compared for the two groups. The grade, deviation of the screw entry point, deviation of the screw medial angle and screw length were measured and compared after surgery for the two groups by independent‐sample tests. Results There was a significant difference in the length of the incision and blood loss between the two groups (P < 0.05). There was a significant difference between the two groups for grade (P = 0.016). The deviation of the screw entry point was 0.65 ± 0.50 mm in the flexible drill group and 0.78 ± 0.83 mm in the traditional drill group. The deviation of the screw medial angle was 2.14 ± 1.78 in the flexible drill group and 4.23 ± 2.51 in the traditional drill group, with a significant difference between the two groups (P < 0.05). Conclusion Compared with regular guiding techniques, lower cervical pedicle screw placement assisted by multistep navigation templates and flexible K‐wires results in less trauma and better safety

Association of non-obstructive dyspnoea with all-cause mortality and incident chronic obstructive pulmonary disease: a systematic literature review and meta-analysis

Background Controversy exists regarding the association between non-obstructive dyspnoea and the future development of chronic obstructive pulmonary disease (COPD) and mortality. Therefore, we aimed to evaluate the association of non-obstructive dyspnoea with mortality and incident COPD in adults.Methods We searched PubMed, Embase, and Web of Science to identify studies published from inception to 13 May 2023. Eligibility screening, data extraction, and quality assessment of the retrieved articles were conducted independently by two reviewers. Studies were included if they were original articles comparing incident COPD and all-cause mortality between individuals with normal lung function with and without dyspnoea. The primary outcomes were incident COPD and all-cause mortality. The secondary outcome was respiratory disease-related mortality. We used the random-effects model to calculate pooled estimates and corresponding 95% confidence interval (CI). Heterogeneity was determined using the I² statistic.Results Of 6486 studies, 8 studies involving 100 758 individuals fulfilled the inclusion and exclusion criteria and were included in the study. Compared with individuals without non-obstructive dyspnoea, individuals with non-obstructive dyspnoea had an increased risk of incident COPD (relative risk: 1.41, 95% CI: 1.08 to 1.83), and moderate heterogeneity was found (p=0.079, I2=52.2%). Individuals with non-obstructive dyspnoea had a higher risk of all-cause mortality (hazard ratio: 1.21, 95% CI: 1.14 to 1.28, I2=0.0%) and respiratory disease-related mortality (hazard ratio: 1.52, 95% CI: 1.14 to 2.02, I2=0.0%) than those without.Conclusions Individuals with non-obstructive dyspnoea are at a higher risk of incident COPD and all-cause mortality than individuals without dyspnoea. Further research should investigate whether these high-risk adults may benefit from risk management and early therapeutic intervention.PROSPERO registration number CRD42023395192