Two-dimensional polymer networks at a mixed boundary: Surface and wedge exponents

We provide general formulae for the configurational exponents of an arbitrary polymer network connected to the surface of an arbitrary wedge of the two-dimensional plane, where the surface is allowed to assume a general mixture of boundary conditions on either side of the wedge. We report on a comprehensive study of a linear chain by exact enumeration, with various attachments of the walk's ends to the surface, in wedges of angles $\pi/2$ and $\pi$, with general mixed boundary conditions.Comment: 4 pages, Latex2e, 3 figures, Eur. Phys. J. B macro

Ultimate Intelligence Part I: Physical Completeness and Objectivity of Induction

We propose that Solomonoff induction is complete in the physical sense via several strong physical arguments. We also argue that Solomonoff induction is fully applicable to quantum mechanics. We show how to choose an objective reference machine for universal induction by defining a physical message complexity and physical message probability, and argue that this choice dissolves some well-known objections to universal induction. We also introduce many more variants of physical message complexity based on energy and action, and discuss the ramifications of our proposals.Comment: Under review at AGI-2015 conference. An early draft was submitted to ALT-2014. This paper is now being split into two papers, one philosophical, and one more technical. We intend that all installments of the paper series will be on the arxi

Community-onset Staphylococcus aureus infections presenting to general practices in South-eastern Australia

Community-acquired Staphylococcus aureus infections are a public health concern, yet little is known about infections that do not present to hospital. We identified community-onset S. aureus infections via specimens submitted to a community-based pathology service. Referring doctors confirmed eligibility and described infection site, severity and treatment. Isolates were characterized on antibiotic resistance, PFGE, MLST/SCCmec, and Panton–Valentine leukocidin (PVL), representing 106 community-onset infections; 34 non-multiresistant methicillin-resistant S. aureus (nmMRSA) (resistant to <3 non-β-lactam antibiotics), 15 multiply antibiotic-resistant MRSA (mMRSA) and 57 methicillin-sensitive S. aureus (MSSA). Most (93%) were skin and soft tissue infections. PVL genes were carried by 42% of nmMRSA isolates [95% confidence interval (CI) 26–61] and 15% of MSSA (95% CI 8–28). PVL was associated with infections of the trunk, head or neck (56•4% vs. 24•3%, P = 0•005) in younger patients (23 vs. 52 years, P < 0•001), and with boils or abscesses (OR 8•67, 95% CI 2•9–26•2), suggesting underlying differences in exposure and/or pathogenesis

Lattice model for cold and warm swelling of polymers in water

We define a lattice model for the interaction of a polymer with water. We solve the model in a suitable approximation. In the case of a non-polar homopolymer, for reasonable values of the parameters, the polymer is found in a non-compact conformation at low temperature; as the temperature grows, there is a sharp transition towards a compact state, then, at higher temperatures, the polymer swells again. This behaviour closely reminds that of proteins, that are unfolded at both low and high temperatures.Comment: REVTeX, 5 pages, 2 EPS figure

Calculations of parity nonconserving s-d transitions in Cs, Fr, Ba II, and Ra II

We have performed ab initio mixed-states and sum-over-states calculations of parity nonconserving (PNC) electric dipole (E1) transition amplitudes between s-d electron states of Cs, Fr, Ba II, and Ra II. For the lower states of these atoms we have also calculated energies, E1 transition amplitudes, and lifetimes. We have shown that PNC E1 transition amplitudes between s-d states can be calculated to high accuracy. Contrary to the Cs 6s-7s transition, in these transitions there are no strong cancelations between different terms in the sum-over-states approach. In fact, there is one dominating term which deviates from the sum by less than 20%. This term corresponds to an s-p_{1/2} weak matrix element, which can be calculated to better than 1%, and a p_{1/2}-d_{3/2} E1 transition amplitude, which can be measured. Also, the s-d amplitudes are about four times larger than the corresponding s-s transitions. We have shown that by using a hybrid mixed-states/sum-over-states approach the accuracy of the calculations of PNC s-d amplitudes could compete with that of Cs 6s-7s if p_{1/2}-d_{3/2} E1 amplitudes are measured to high accuracy.Comment: 15 pages, 8 figures, submitted to Phys. Rev.

High accuracy calculation of 6s -> 7s parity nonconserving amplitude in Cs

We calculated the parity nonconserving (PNC) 6s -> 7s amplitude in Cs. In the Dirac-Coulomb approximation our result is in a good agreement with other calculations. Breit corrections to the PNC amplitude and to the Stark-induced amplitude $\beta$ are found to be -0.4% and -1% respectively. The weak charge of $^{133}$Cs is $Q_W=-72.5 \pm 0.7$ in agreement with the standard model.Comment: 4 pages, LaTeX2e, uses revtex4.cls, submitted to PR

Evolutionary adaptation of an AraC-like regulatory protein in Citrobacter rodentium and Escherichia species

© 2015, American Society for Microbiology. The evolution of pathogenic bacteria is a multifaceted and complex process, which is strongly influenced by the horizontal acquisition of genetic elements and their subsequent expression in their new hosts. A well-studied example is the RegA regulon of the enteric pathogen Citrobacter rodentium. The RegA regulatory protein is a member of the AraC/XylS superfamily, which coordinates the expression of a gene repertoire that is necessary for full pathogenicity of this murine pathogen. Upon stimulation by an exogenous, gut-associated signal, namely, bicarbonate ions, RegA activates the expression of a series of genes, including virulence factors, such as autotransporters, fimbriae, a dispersin-like protein, and the grlRA operon on the locus of enterocyte effacement pathogenicity island. Interestingly, the genes encoding RegA homologues are distributed across the genus Escherichia, encompassing pathogenic and nonpathogenic subtypes. In this study, we carried out a series of bioinformatic, transcriptional, and functional analyses of the RegA regulons of these bacteria. Our results demonstrated that regA has been horizontally transferred to Escherichia spp. and C. rodentium. Comparative studies of two RegA homologues, namely, those from C. rodentium and E. coli SMS-3-5, a multiresistant environmental strain of E. coli, showed that the two regulators acted similarly in vitro but differed in terms of their abilities to activate the virulence of C. rodentium in vivo, which evidently was due to their differential activation of grlRA. Our data indicate that RegA from C. rodentium has strain-specific adaptations that facilitate infection of its murine host. These findings shed new light on the development of virulence by C. rodentium and on the evolution of virulence- regulatory genes of bacterial pathogens in general

Geometrical Properties of Two-Dimensional Interacting Self-Avoiding Walks at the Theta-Point

We perform a Monte Carlo simulation of two-dimensional N-step interacting self-avoiding walks at the theta point, with lengths up to N=3200. We compute the critical exponents, verifying the Coulomb-gas predictions, the theta-point temperature T_theta = 1.4986(11), and several invariant size ratios. Then, we focus on the geometrical features of the walks, computing the instantaneous shape ratios, the average asphericity, and the end-to-end distribution function. For the latter quantity, we verify in detail the theoretical predictions for its small- and large-distance behavior.Comment: 23 pages, 4 figure

Measurement of the 6s - 7p transition probabilities in atomic cesium and a revised value for the weak charge Q_W

We have measured the 6s - 7p_{1/2,3/2} transition probabilities in atomic cesium using a direct absorption technique. We use our result plus other previously measured transition rates to derive an accurate value of the vector transition polarizability \beta and, consequently, re-evaluate the weak charge Q_W. Our derived value Q_W=-72.65(49) agrees with the prediction of the standard model to within one standard deviation.Comment: 4 pages, 2 figure

Osculating and neighbour-avoiding polygons on the square lattice

We study two simple modifications of self-avoiding polygons. Osculating polygons are a super-set in which we allow the perimeter of the polygon to touch at a vertex. Neighbour-avoiding polygons are only allowed to have nearest neighbour vertices provided these are joined by the associated edge and thus form a sub-set of self-avoiding polygons. We use the finite lattice method to count the number of osculating polygons and neighbour-avoiding polygons on the square lattice. We also calculate their radius of gyration and the first area-weighted moment. Analysis of the series confirms exact predictions for the critical exponents and the universality of various amplitude combinations. For both cases we have found exact solutions for the number of convex and almost-convex polygons.Comment: 14 pages, 5 figure