Assessment of White Spruce and Jack Pine Stem Curvature from a Nelder Spacing Experiment

This study presents a method for calculating stem curvature for trees with multiple deviations. Generally, tree curvature is assessed using the maximum deflection method. It consists of measuring the farthest point from a straight line drawn between the large and small ends of a stem. It works fairly well for a single deviation but gives poorer results for stems with several deviations. The stems used for developing this method were harvested from a 32-yr-old Nelder spacing experiment established near Woodstock, New Brunswick, Canada. A total of 96 trees were selected for this study from the white spruce (Picea glauca [Moench] Voss) and jack pine (Pinus banksiana Lamb.) that were planted on the same Nelder circle. This particular plantation design offered a gradient of initial spacings ranging from 640 to 12,000 stems/ha. Results of analysis revealed that initial spacing had an impact on tree curvature. Stem curvature increased with wider initial spacing. However, this influence varied between species and differed according to the method used to calculate curvature. The vector length calculation method showed that stem curvature in jack pine was more pronounced and more often encountered at lower densities than in white spruce. It was also observed that tree shape was influenced by the cardinal points with white spruce growing more in westerly and southerly directions

β\beta-NMR of Isolated 8^{8}Li+^{+} Implanted into a Thin Copper Film

Depth-controlled $\beta$-NMR was used to study highly spin-polarized $^8$Li in a Cu film of thickness 100 nm deposited onto a MgO substrate. The positive Knight Shifts and spin relaxation data show that $^8$Li occupies two sites at low temperatures, assigned to be the substitutional ($S$) and octahedral ($O$) interstitial sites. Between 50 to 100 K, there is a site change from $O$ to $S$. The temperature dependence of the Knight shifts and spin-lattice relaxation rates at high temperatures, i.e. when all the Li are in the $S$ site, is consistent with the Korringa Law for a simple metal.Comment: Accepted for publication in Phys. Rev.

Cuf2 Is a Novel Meiosis-Specific Regulatory Factor of Meiosis Maturation

Meiosis is the specialized form of the cell cycle by which diploid cells produce the haploid gametes required for sexual reproduction. Initiation and progression through meiosis requires that the expression of the meiotic genes is precisely controlled so as to provide the correct gene products at the correct times. During meiosis, four temporal gene clusters are either induced or repressed by a cascade of transcription factors

Networks of nonlinear superconducting transmission line resonators

We investigate a network of coupled superconducting transmission line resonators, each of them made nonlinear with a capacitively shunted Josephson junction coupling to the odd flux modes of the resonator. The resulting eigenmode spectrum shows anticrossings between the plasma mode of the shunted junction and the odd resonator modes. Notably, we find that the combined device can inherit the complete nonlinearity of the junction, allowing for a description as a harmonic oscillator with a Kerr nonlinearity. Using a dc SQUID instead of a single junction, the nonlinearity can be tuned between 10 kHz and 4 MHz while maintaining resonance frequencies of a few gigahertz for realistic device parameters. An array of such nonlinear resonators can be considered a scalable superconducting quantum simulator for a Bose-Hubbard Hamiltonian. The device would be capable of accessing the strongly correlated regime and be particularly well suited for investigating quantum many-body dynamics of interacting particles under the influence of drive and dissipation.Comment: 18 pages, 3 figure

Tackling functional redundancy of Arabidopsis fatty acid elongase complexes

Very-long-chain fatty acids (VLCFA) are precursors for various lipids playing important physiological and structural roles in plants. Throughout plant tissues, VLCFA are present in multiple lipid classes essential for membrane homeostasis, and also stored in triacylglycerols. VLCFA and their derivatives are also highly abundant in lipid barriers, such as cuticular waxes in aerial epidermal cells and suberin monomers in roots. VLCFA are produced by the fatty acid elongase (FAE), which is an integral endoplasmic reticulum membrane multi-enzymatic complex consisting of four core enzymes. The 3-ketoacyl-CoA synthase (KCS) catalyzes the first reaction of the elongation and determines the chain-length substrate specificity of each elongation cycle, whereas the other three enzymes have broad substrate specificities and are shared by all FAE complexes. Consistent with the co-existence of multiple FAE complexes, performing sequential and/or parallel reactions to produce the broad chain-length-range of VLCFA found in plants, twenty-one KCS genes have been identified in the genome of Arabidopsis thaliana. Using CRISPR-Cas9 technology, we established an expression platform to reconstitute the different Arabidopsis FAE complexes in yeast. The VLCFA produced in these yeast strains were analyzed in detail to characterize the substrate specificity of all KCS candidates. Additionally, Arabidopsis candidate proteins were transiently expressed in Nicotiana benthamiana leaves to explore their activity and localization in planta. This work sheds light on the genetic and biochemical redundancy of fatty acid elongation in plants

Active eukaryotes in microbialites from Highborne Cay, Bahamas, and Hamelin Pool (Shark Bay), Australia

Author Posting. © The Author(s), 2013. This is the author's version of the work. It is posted here by permission of Nature Publishing Group for personal use, not for redistribution. The definitive version was published in The ISME Journal 8 (2014): 418–429, doi:10.1038/ismej.2013.130.Microbialites are organosedimentary structures that are formed through the interaction of benthic microbial communities and sediments and include mineral precipitation. These lithifying microbial mat structures include stromatolites and thrombolites. Exuma Sound in the Bahamas, and Hamelin Pool in Shark Bay, Western Australia are two locations where significant stands of modern microbialites exist. Although prokaryotic diversity in these structures is reasonably well documented, little is known about the eukaryotic component of these communities and their potential to influence sedimentary fabrics through grazing, binding and burrowing activities. Accordingly, comparisons of eukaryotic communities in modern stromatolitic and thrombolytic mats can potentially provide insight into the coexistence of both laminated and clotted mat structures in close proximity to one another. Here we examine this possibility by comparing eukaryotic diversity based on Sanger and high-throughput pyrosequencing of small subunit ribosomal RNA (18S rRNA) genes. Analyses were based on total RNA extracts as template to minimize input from inactive or deceased organisms. Results identified diverse eukaryotic communities particularly stramenopiles, Alveolata, Metazoa, Amoebozoa, and Rhizaria within different mat types at both locations, as well as abundant and diverse signatures of eukaryotes with <80% sequence similarity to sequences in GenBank. This suggests presence of significant novel eukaryotic diversity, particularly in hypersaline Hamelin Pool. There was evidence of vertical structuring of protist populations and foraminiferal diversity was highest in bioturbated/clotted thrombolite mats of Highborne Cay.This work was funded by grant OCE-0926421 to JMB and VPE and OCE-0926372 to RES

Dual-frequency VECSEL for atomic clocks using coherent population trapping

Workshop on Laser Diodes for Space Applications, Nov 2015, Palaiseau, FranceAtomic frequency references provide high-precision stable signals, which are crucial in the most demanding applications as high bitrate communication networks, high-end inertial navigation, or satellite positioning. One way to obtain those laser fields with low intensity-and frequency-noise is to use the dual-frequency and dual-polarization emission of an optically-pumped vertical external-cavity semiconductor laser (OP-VECSEL)

Laser à semiconducteur à 852 nm bifrequence pompé optiquement pour les horloges atomiques CPT (poster)

National audienceNous présentons un laser à semiconducteur en cavité externe pompé optiquement, émettant sur deux fréquences optiques polarisées perpendiculairement, destiné au piégeage cohérent d'atomes (CPT) de Cs. L'émission est accordable autour de 852 nm. La différence de fréquence est ajustée grâce à une lame électro-optique autour de 9,2 GHz. La longueur d'onde du mode ordinaire est stabilisée sur la raie D2 du Cs et la différence de fréquence est asservie sur un signal de référence RF. En fonctionnement stabilisé, nous caractérisons les sources de bruits du laser afin d'évaluer les performances du laser en vue de son application dans une horloge atomique CPT

Copper-Dependent Trafficking of the Ctr4-Ctr5 Copper Transporting Complex

In Schizosaccharomyces pombe, copper uptake is carried out by a heteromeric complex formed by the Ctr4 and Ctr5 proteins. Copper-induced differential subcellular localization may play a critical role with respect to fine tuning the number of Ctr4 and Ctr5 molecules at the cell surface.We have developed a bimolecular fluorescence complementation (BiFC) assay to analyze protein-protein interactions in vivo in S. pombe. The assay is based on the observation that N- and C-terminal subfragments of the Venus fluorescent protein can reconstitute a functional fluorophore only when they are brought into tight contact. Wild-type copies of the ctr4(+) and ctr5(+) genes were inserted downstream of and in-frame with the nonfluorescent C-terminal (VC) and N-terminal (VN) coding fragments of Venus, respectively. Co-expression of Ctr4-VC and Ctr5-VN fusion proteins allowed their detection at the plasma membrane of copper-limited cells. Similarly, cells co-expressing Ctr4-VN and Ctr4-VC in the presence of Ctr5-Myc(12) displayed a fluorescence signal at the plasma membrane. In contrast, Ctr5-VN and Ctr5-VC co-expressed in the presence of Ctr4-Flag(2) failed to be visualized at the plasma membrane, suggesting a requirement for a combination of two Ctr4 molecules with one Ctr5 molecule. We found that plasma membrane-located Ctr4-VC-Ctr5-VN fluorescent complexes were internalized when the cells were exposed to high levels of copper. The copper-induced internalization of Ctr4-VC-Ctr5-VN complexes was not dependent on de novo protein synthesis. When cells were transferred back from high to low copper levels, there was reappearance of the BiFC fluorescent signal at the plasma membrane.These findings reveal a copper-dependent internalization and recycling of the heteromeric Ctr4-Ctr5 complex as a function of copper availability