Bending rigidity of stiff polyelectrolyte chains: Single chain and a bundle of multichains

We study the bending rigidity of highly charged stiff polyelectrolytes, for both a single chain and many chains forming a bundle. A theory is developed to account for the interplay between competitive binding of counterions and charge correlations in softening the polyelectrolyte (PE) chains. The presence of even a small concentration of multivalent counterions leads to a dramatic reduction in the bending rigidity of the chains that are nominally stiffened by the repulsion between their backbone charges. The variation of the bending rigidity as a function of $f_{0}$, the fraction of charged monomers on the chain, does not exhibits simple scaling behavior; it grows with increasing $f_{0}$ below a critical value of $f_{0}$. Beyond the critical value, however, the chain becomes softer as $f_{0}$ increases. The bending rigidity also exhibits intriguing dependence on the concentration of multivalent counterion $n_{2}$; for highly charged PEs, the bending rigidity decreases as $n_2$ increases from zero, while it increases with increasing $n_{2}$ beyond a certain value of $n_{2}$. When polyelectrolyte chains form a $N$-loop condensate (e.g., a toroidal bundle formed by $N$ turns (winds) of the chain), the inter-loop coupling further softens the condensate, resulting in the bending free energy of the condensate that scales as $N$ for large $N$.Comment: 11 pages, 2 figure

Stretching Homopolymers

Force induced stretching of polymers is important in a variety of contexts. We have used theory and simulations to describe the response of homopolymers, with $N$ monomers, to force ($f$) in good and poor solvents. In good solvents and for {{sufficiently large}} $N$ we show, in accord with scaling predictions, that the mean extension along the $f$ axis $\sim f$ for small $f$, and $\sim f^{{2/3}}$ (the Pincus regime) for intermediate values of $f$. The theoretical predictions for \la Z\ra as a function of $f$ are in excellent agreement with simulations for N=100 and 1600. However, even with N=1600, the expected Pincus regime is not observed due to the the breakdown of the assumptions in the blob picture for finite $N$. {{We predict the Pincus scaling in a good solvent will be observed for $N\gtrsim 10^5$}}. The force-dependent structure factors for a polymer in a poor solvent show that there are a hierarchy of structures, depending on the nature of the solvent. For a weakly hydrophobic polymer, various structures (ideal conformations, self-avoiding chains, globules, and rods) emerge on distinct length scales as $f$ is varied. A strongly hydrophobic polymer remains globular as long as $f$ is less than a critical value $f_c$. Above $f_c$, an abrupt first order transition to a rod-like structure occurs. Our predictions can be tested using single molecule experiments.Comment: 24 pages, 7 figure

Neutron and muon-induced background studies for the AMoRE double-beta decay experiment

AMoRE (Advanced Mo-based Rare process Experiment) is an experiment to search a neutrinoless double-beta decay of $^{100}$Mo in molybdate crystals. The neutron and muon-induced backgrounds are crucial to obtain the zero-background level (<$10^{-5}$ counts/(keV$\cdot$kg$\cdot$yr)) for the AMoRE-II experiment, which is the second phase of the AMoRE project, planned to run at YEMI underground laboratory. To evaluate the effects of neutron and muon-induced backgrounds, we performed Geant4 Monte Carlo simulations and studied a shielding strategy for the AMORE-II experiment. Neutron-induced backgrounds were also included in the study. In this paper, we estimated the background level in the presence of possible shielding structures, which meet the background requirement for the AMoRE-II experiment

Effects of adsorbed phase on diffusion of subcritical hydrocarbons in activated carbon at low pressures

Diffusions of free and adsorbed molecules of subcritical hydrocarbons in activated carbon were investigated to study the influence of adsorbed molecules on both diffusion processes at low pressures. A collision reflection factor, defined as the fraction of molecules undergoing collision to the solid surface over reflection from the surface, is incorporated into Knudsen diffusivity and surface diffusivity in meso/macropores. Since the porous structure of activated carbon is bimodal in nature, the diffusion of adsorbed molecules is contributed by that of weakly adsorbed molecules on the meso/macropore surfaces and that of strongly adsorbed molecules in the small confinement of micropores. The mobility of adsorbed molecules on the meso/macropore surface is characterized by the surface diffusivity D-mu 2, while that in the micropore is characterized by D-mu 1. In our study with subcritical hydrocarbons, we have found that the former increases almost linearly with pressure, while the latter exhibits a sharp increase at a very low-pressure region and then decreases beyond a critical pressure. This critical pressure is identified as a pressure at which the micropores are saturated

Measurement and models accounting for cell death capture hidden variation in compound response.

Cancer cell sensitivity or resistance is almost universally quantified through a direct or surrogate measure of cell number. However, compound responses can occur through many distinct phenotypic outcomes, including changes in cell growth, apoptosis, and non-apoptotic cell death. These outcomes have divergent effects on the tumor microenvironment, immune response, and resistance mechanisms. Here, we show that quantifying cell viability alone is insufficient to distinguish between these compound responses. Using an alternative assay and drug-response analysis amenable to high-throughput measurement, we find that compounds with identical viability outcomes can have very different effects on cell growth and death. Moreover, additive compound pairs with distinct growth/death effects can appear synergistic when only assessed by viability. Overall, these results demonstrate an approach to incorporating measurements of cell death when characterizing a pharmacologic response

On magnetic leaf-wise intersections

In this article we introduce the notion of a magnetic leaf-wise intersection point which is a generalization of the leaf-wise intersection point with magnetic effects. We also prove the existence of magnetic leaf-wise intersection points under certain topological assumptions.Comment: 43 page

Atomic and nano-scale characterization of a 50-year-old hydrated C3S paste

This paper investigates the atomic and nano-scale structures of a 50-year-old hydrated alite paste. Imaged by TEM, the outer product C-S-H fibers are composed of particles that are 1.5-2 nm thick and several tens of nanometers long. 29Si NMR shows 47.9% Q1 and 52.1% Q2, with a mean SiO4 tetrahedron chain length (MCL) of 4.18, indicating a limited degree of polymerization after 50 years' hydration. A Scanning Transmission X-ray Microscopy (STXM) study was conducted on this late-age paste and a 1.5 year old hydrated C3S solution. Near Edge X-ray Absorption Fine Structure (NEXAFS) at Ca L3,2-edge indicates that Ca2 + in C-S-H is in an irregular symmetric coordination, which agrees more with the atomic structure of tobermorite than that of jennite. At Si K-edge, multi-scattering phenomenon is sensitive to the degree of polymerization, which has the potential to unveil the structure of the SiO44 - tetrahedron chain