Four identical subunits in jack fruit seed agglutinin offer only two saccharide binding sites

AbstractGel filtration of jack fruit seed agglutinin in 6 M guanidine hydrochloride confirmed our earlier report that the native 39.5-kDa protein was a tetramer of identical noncovalently associated 10-kDa subunits. Binding studies by the fluorescence quenching method using 4-methylumbelliferyl α-D-galactoside as well as equilibrium dialysis using p-nitrophenyl α-D-galactoside indicated only two binding sites per tetramer. This behaviour resembles the half-of-the-sites reactivity in certain enzymes and is discussed in view of the small subunit size

Some Systematics of the Coupling Constant Dependence of N=4 Yang-Mills

The operator, O_\tau, that generates infinitesimal changes of the coupling constant in N=4 Yang-Mills sits in the same supermultiplet as the superconformal currents. We show how superconformal current Ward identities determine a class of terms in the operator product expansion of O_\tau with any other operator. In certain cases, this leads to constraints on the coupling dependence of correlation functions in N=4 Yang-Mills. As an application, we demonstrate the exact non-renormalization of two and certain three-point correlation functions of BPS operators.Comment: 56 pages, LaTeX; amended and expanded arguments, added reference

The Self-dual String Soliton in AdS_4\times S^7 spacetime

We construct self-dual string soliton solutions in $AdS_4\times S^7$ spacetime, starting from the covariant equations of motion of M5-brane. We study the properties of the solutions and find that their action are linearized, indicating the BPS nature of the solutions, and they have the same electric and magnetic charge. The straight string soliton solution represents the configuration of the membranes ending on M5-brane with a straight string intersection, and it behaves like the spiky solution in flat spacetime. The spherical string soliton solution, which could be related to the straight one by a conformal transformation, represents the membranes ending on M5-brane with a spherical intersection.Comment: 15 pages;typos corrected, references added;published versio

Constructing Self-Dual Strings

We present an ADHMN-like construction which generates self-dual string solutions to the effective M5-brane worldvolume theory from solutions to the Basu-Harvey equation. Our construction finds a natural interpretation in terms of gerbes, which we develop in some detail. We also comment on a possible extension to stacks of multiple M5-branes.Comment: 1+19 pages, presentation improved, minor corrections, published versio

Physical Properties of Wave Motion in Inclined Magnetic Fields Within Sunspot Penumbrae

At the surface of the Sun, acoustic waves appear to be affected by the presence of strong magnetic fields in active regions. We explore the possibility that the inclined magnetic field in sunspot penumbrae may convert primarily vertically propagating acoustic waves into elliptical motion. We use helioseismic holography to measure the modulus and phase of the correlation between incoming acoustic waves and the local surface motion within two sunspots. These correlations are modeled assuming the surface motion is elliptical, and we explore the properties of the elliptical motion on the magnetic field inclination. We also demonstrate that the phase shift of the outward propagating waves is opposite to the phase shift of the inward propagating waves in stronger, more vertical fields, but similar to the inward phase shifts in weaker, more inclined fields.Comment: 22 pages, 13 figure

Helioseismology of Sunspots: A Case Study of NOAA Region 9787

Various methods of helioseismology are used to study the subsurface properties of the sunspot in NOAA Active Region 9787. This sunspot was chosen because it is axisymmetric, shows little evolution during 20-28 January 2002, and was observed continuously by the MDI/SOHO instrument. (...) Wave travel times and mode frequencies are affected by the sunspot. In most cases, wave packets that propagate through the sunspot have reduced travel times. At short travel distances, however, the sign of the travel-time shifts appears to depend sensitively on how the data are processed and, in particular, on filtering in frequency-wavenumber space. We carry out two linear inversions for wave speed: one using travel-times and phase-speed filters and the other one using mode frequencies from ring analysis. These two inversions give subsurface wave-speed profiles with opposite signs and different amplitudes. (...) From this study of AR9787, we conclude that we are currently unable to provide a unified description of the subsurface structure and dynamics of the sunspot.Comment: 28 pages, 18 figure

Genetic Dissection of Drought and Heat Tolerance in Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping Approaches

To understand the genetic basis of tolerance to drought and heat stresses in chickpea, a comprehensive association mapping approach has been undertaken. Phenotypic data were generated on the reference set (300 accessions, including 211 mini-core collection accessions) for drought tolerance related root traits, heat tolerance, yield and yield component traits from 1–7 seasons and 1–3 locations in India (Patancheru, Kanpur, Bangalore) and three locations in Africa (Nairobi, Egerton in Kenya and Debre Zeit in Ethiopia). Diversity Array Technology (DArT) markers equally distributed across chickpea genome were used to determine population structure and three sub-populations were identified using admixture model in STRUCTURE. The pairwise linkage disequilibrium (LD) estimated using the squared-allele frequency correlations (r2; when r2<0.20) was found to decay rapidly with the genetic distance of 5 cM. For establishing marker-trait associations (MTAs), both genome-wide and candidate gene-sequencing based association mapping approaches were conducted using 1,872 markers (1,072 DArTs, 651 single nucleotide polymorphisms [SNPs], 113 gene-based SNPs and 36 simple sequence repeats [SSRs]) and phenotyping data mentioned above employing mixed linear model (MLM) analysis with optimum compression with P3D method and kinship matrix. As a result, 312 significant MTAs were identified and a maximum number of MTAs (70) was identified for 100-seed weight. A total of 18 SNPs from 5 genes (ERECTA, 11 SNPs; ASR, 4 SNPs; DREB, 1 SNP; CAP2 promoter, 1 SNP and AMDH, 1SNP) were significantly associated with different traits. This study provides significant MTAs for drought and heat tolerance in chickpea that can be used, after validation, in molecular breeding for developing superior varieties with enhanced drought and heat tolerance

Modeling the Subsurface Structure of Sunspots

While sunspots are easily observed at the solar surface, determining their subsurface structure is not trivial. There are two main hypotheses for the subsurface structure of sunspots: the monolithic model and the cluster model. Local helioseismology is the only means by which we can investigate subphotospheric structure. However, as current linear inversion techniques do not yet allow helioseismology to probe the internal structure with sufficient confidence to distinguish between the monolith and cluster models, the development of physically realistic sunspot models are a priority for helioseismologists. This is because they are not only important indicators of the variety of physical effects that may influence helioseismic inferences in active regions, but they also enable detailed assessments of the validity of helioseismic interpretations through numerical forward modeling. In this paper, we provide a critical review of the existing sunspot models and an overview of numerical methods employed to model wave propagation through model sunspots. We then carry out an helioseismic analysis of the sunspot in Active Region 9787 and address the serious inconsistencies uncovered by \citeauthor{gizonetal2009}~(\citeyear{gizonetal2009,gizonetal2009a}). We find that this sunspot is most probably associated with a shallow, positive wave-speed perturbation (unlike the traditional two-layer model) and that travel-time measurements are consistent with a horizontal outflow in the surrounding moat.Comment: 73 pages, 19 figures, accepted by Solar Physic

Surface-focused Seismic Holography of Sunspots: I. Observations

We present a comprehensive set of observations of the interaction of p-mode oscillations with sunspots using surface-focused seismic holography. Maps of travel-time shifts, relative to quiet-Sun travel times, are shown for incoming and outgoing p modes as well as their mean and difference. We compare results using phase-speed filters with results obtained with filters that isolate single p-mode ridges, and further divide the data into multiple temporal frequency bandpasses. The f mode is removed from the data. The variations of the resulting travel-time shifts with magnetic-field strength and with the filter parameters are explored. We find that spatial averages of these shifts within sunspot umbrae, penumbrae, and surrounding plage often show strong frequency variations at fixed phase speed. In addition, we find that positive values of the mean and difference travel-time shifts appear exclusively in waves observed with phase-speed filters that are dominated by power in the low-frequency wing of the p1 ridge. We assess the ratio of incoming to outgoing p-mode power using the ridge filters and compare surface-focused holography measurements with the results of earlier published p-mode scattering measurements using Fourier-Hankel decomposition.Comment: Solar Physics, accepte