Why ammonium detection is particularly challenging but insightful with ionophore-based potentiometric sensors-an overview of the progress in the last 20 years

The monitoring of ammonium ion concentration has gained the attention of researchers from multiple fields since it is a crucial parameter with respect to environmental and biomedical applications. For example, ammonium is considered to be a quality indicator of natural waters as well as a potential biomarker of an enzymatic byproduct in key physiological reactions. Among the classical analytical methods used for the detection of ammonium ions, potentiometric ion-selective electrodes (ISEs) have attracted special attention in the scientific community because of their advantages such as cost-effectiveness, user-friendly features, and miniaturization ability, which facilitate easy portable measurements. Regarding the analytical performance, the key component of ISEs is the selective receptor, labelled as an ionophore in ISE jargon. Indeed, the preference of an ionophore for ammonium amongst other ions (i.e., selectivity) is a factor that primarily dictates the limit of detection of the electrode when performing measurements in real samples. A careful assessment of the literature for the last 20 years reveals that nonactin is by far the most employed ammonium ionophore to date. Despite the remarkable cross-interference of potassium over the ammonium response of nonactin-based ISEs, analytical applications comprising water quality assessment, clinical tests in biological fluids, and sweat monitoring during sports practice have been successfully researched. Nevertheless, there is evident difficulty in the determination of close-to-micromolar levels of ammonium in real samples with a significant potassium background level (i.e., millimolar concentration). This fact has fostered the search for a large variety of ammonium ionophores over the years, which are critically inspected herein. Overall, we provide an easily readable state of the art accompanied by a comprehensive description of other types of ammonium electrodes, including commercially available units. We conclude that newer breakthroughs are still required in the field to reach the desired analytical applications

Insights into Tripodal Tris(pyrazolyl) Compounds as Ionophores for Potentiometric Ammonium Ion Sensing

The decentralisation of accurate determination of the ammonium ion (NH4+) is relevant for environmental monitoring (i. e., nitrogen cycle) and certain clinical applications (e. g., kidney and liver diseases). Potentiometric ionophore-based sensors are one alternative for these purposes in terms of versatile implementation, though the potassium ion (K+) is known to be a major source of interference. We herein investigate the use of three different tripodal tris(pyrazolyl) compounds derived from 1,3,5-triethylbenzene as NH4+ ionophores. A complete set of potentiometric experiments together with theoretical simulations reveals suitable analytical performance while demonstrating a suppression of the K+ interference given the formation of an adequate cavity in the ionophore to host NH4+ over K+ in the membrane environment. The results support the use of these electrodes in the analytical detection of NH4+ in a wide range of samples with variable contents

FP7-OCEAN-2013 - SCHeMA: Integrated in situ chemical mapping probes

Coastal areas are vulnerable ecosystems comprising unique biological niches that require protection. Identification of relevant types of hazards at the appropriate temporal and spatial scale is crucial to detect their sources and origin, to understand the processes governing their magnitude and distribution, and to ultimately evaluate and manage their risks and consequences preventing economic losses. SCHeMA aims to provide an open and modular sensing solution for autonomous in situ high resolution mapping of a range of anthropogenic and natural chemical compounds coupled to master bio-physicochemical parameters. User-friendly data discovery, access and download as well as interoperability with other projects will be achieved via dedicated interface compatible with INSPIRE and GEO/GEOSS standards and principles

Genetic dissection of tomato rootstock effects on scion traits under moderate salinity

The present study approaches the QTL dissection of rootstock effects on a commercial hybrid variety grafted on a population of RILs derived from Solanum pimpinellifolium, genotyped for 4370 segregating SNPs from the SolCAP tomato panel and grown under moderate salinity. Results are compared to those previously obtained under high salinity. The most likely functional candidate genes controlling the scion [Na+] were rootstock HKT1;1 and HKT1;2 as it was previously reported for non-grafted genotypes. The higher fruit [Na+] found when rootstock genotype was homozygote for SpHKT1 supports the thesis that scion HKT1 is loading Na+ into the phloem sap in leaves and unloading it in sink organs. A significant increment of small, mostly seedless, fruits was found associated with SlHKT1 homozygous rootstocks. Just grafting increased the incidence of blossom end rot and delayed fruit maturation but there were rootstock RILs that increased commercial fruit yield under moderate salinity. The heritability and number of QTLs involved were lower and different than those found under high salinity. Four large contributing (>17 %) rootstock QTLs, controlling the leaf concentrations of B, K, Mg and Mo were detected whose 2 Mbp physical intervals contained B, K, Mg and Mo transporter-coding genes, respectively. Since a minimum of 3 QTLs (two of them coincident with leaf K and Ca QTLs) were also found governing rootstock-mediated soluble-solids content of the fruit under moderate salinity, grafting desirable crop varieties on stress-tolerant rootstocks tenders an opportunity to increase both salt tolerance and quality

Genetic mapping of two QTL from the wild tomato Solanum pimpinellifolium L. controlling resistance against two-spotted spider mite (Tetranychus urticae Koch)

A novel source of resistance to two-spotted spider mite (Tetranychus urticae Koch) was found in Solanum pimpinellifolium L. accession TO-937 and thereby a potential source of desirable traits that could be introduced into new tomato varieties. This resistance was found to be controlled by a major locus modulated by minor loci of unknown location in the genome of this wild tomato. We first applied a bulked segregant analysis (BSA) approach in an F(4) population as a method for rapidly identifying a genomic region of 17 cM on chromosome 2, flanked by two simple sequence repeat markers, harboring Rtu2.1, one of the major QTL involved in the spider mite resistance. A population of 169 recombinant inbred lines was also evaluated for spider mite infestation and a highly saturated genetic map was developed from this population. QTL mapping corroborated that chromosome 2 harbored the Rtu2.1 QTL in the same region that our previous BSA findings pointed out, but an even more robust QTL was found in the telomeric region of this chromosome. This QTL, we termed Rtu2.2, had a LOD score of 15.43 and accounted for more than 30% of the variance of two-spotted spider mite resistance. Several candidate genes involved in trichome formation, synthesis of trichomes exudates and plant defense signaling have been sequenced. However, either the lack of polymorphisms between the parental lines or their map position, away from the QTL, led to their rejection as candidate genes responsible for the two-spotted spider mite resistance. The Rtu2 QTL not only serve as a valuable target for marker-assisted selection of new spider mite-resistant tomato varieties, but also as a starting point for a better understanding of the molecular genetic functions underlying the resistance to this pest.AGL2007-66760-C02Peer reviewe