7 research outputs found
Correction: Genetic Dissection of Drought and Heat Tolerance in Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping Approaches
<p>Correction: Genetic Dissection of Drought and Heat Tolerance in Chickpea through Genome-Wide and Candidate Gene-Based Association Mapping Approaches</p
Linage disequilibrium (LD) decay across all linkage groups.
<p>The overall LD decay across the genome is at 5</p
Significant marker trait associations (MTAs) for δ<sup>13</sup>C and 100 seed weight mapped on to “<i>QTL-hotspot</i>” on CaLG04 of intra-specific map of chickpea.
<p>(a) Genome wide association scan for δ13C; the Y-axis represent -log<sub>10</sub>(P) values of the P-value of the MTAs, while linkage groups are indicated on X-axis. (b) Genome wide association scan for 100SDW. (c) “<i>QTL-hotspot</i>” on CaLG04 of chickpea intra-specific genetic map harboring QTLs for drought tolerance related traits. Significant MTAs for 100SDW and δ13C falling in the QTL region are indicated using the arrows in red, the traits are indicated using dotted rectangles in green.</p
Candidate gene- based marker trait associations
<p>Candidate gene- based marker trait associations</p
Significant marker-trait associations (MTAs) identified for different traits
<p>Significant marker-trait associations (MTAs) identified for different traits</p
Significant marker trait associations with >25% phenotypic variations and their effects on the trait
<p>*GB-SNP = Gene based SNP.</p
Geographic origin and population structure of chickpea reference set.
<p>a) the distribution of chickpea reference set, <i>desi</i> in red, <i>kabuli</i> in green, pea-shaped in orange and wild in yellow color dots b) ΔK is function of k from the structure run, the plateau at k = 3 indicates number of sub-populations in the reference set; c) Clustering of chickpea set genotypes into three groups (Group I, Group II and Group III).</p