An analysis of the risk of collisions between aircraft and vultures in Namibia

Collisions between aircraft and birds and other animals occur frequently and are known in the aviation industry as wildlife strikes. They are considered to be one of the most serious safety and financial risks to the global aviation industry. The International Civil Aviation Organisation, a United Nations specialised Agency, requires that the appropriate authority shall take action to eliminate or to prevent the establishment of any source which may attract wildlife to the aerodrome, or its vicinity, unless an appropriate wildlife assessment indicates that they are unlikely to create conditions conducive to a wildlife hazard problem. Namibian airports reduce the wildlife strike risk by managing the airport habitat and actively chasing birds and other hazardous animals away. The bird strike risk in airspace between airports is not managed or assessed in Namibia. Following one White-Backed Vulture strike and several reports of near-misses with vultures by pilots of small aircraft, this study investigated possible collision hotspot areas considering small commercial aircraft flight paths and vulture movement areas. The study used spatial proximity analysis and temporal overlap to compare telemetry and nesting location data for the three most commonly encountered vulture species to flight paths and times of small commercial aircraft. Collision risk hotspots were identified over three national parks: Etosha, Waterberg and the Pro-Namib portion of the Namib-Naukluft. Ascending from, or approaching, Hosea Kutako International Airport from the east was identified as a particular risk for White-backed Vulture conflict, while risk of Lappet-faced vulture strikes was high to the east of Walvis Bay airport. Flight times of vultures and aircraft corresponded greatly, increasing the collision risk. The recommendations of this work are that pilots of small commercial aircraft should be made aware of particular risk areas, and that landing at Hosea Kutako from the east, or taking off in an easterly direction should be minimised when wind conditions allow, to reduce vulture collision risk.PostprintPeer reviewe

A community approach for pathogens and their arthropod vectors (ticks and fleas) in cats of sub-Saharan Africa

Background Arthropod-borne pathogens and their vectors are present throughout Africa. They have been well studied in livestock of sub-Saharan Africa, but poorly studied in companion animals. Given their socioeconomic importance, the African Small Companion Animal Network (AFSCAN), as part of the WSAVA Foundation, initiated a standardized multi-country surveillance study. Methods In six countries (Ghana, Kenya, Nigeria, Tanzania, Uganda, and Namibia) in both rural and urban settings, 160 infested cats were sampled to assess their ectoparasite community (ticks and fleas), as well as the micro-parasite prevalence within those ectoparasites (60 and 118 pools of ticks and fleas, respectively) and blood (276 cats, including 116 non-infested). Results Almost two thirds of all infested cats originated from Tanzania and Kenya. Despite the large macro-geographical variation, no consistent difference was found in ectoparasite diversity and numbers between East and West Africa. Far more flea-infested than tick-infested cats were found. The most dominant ectoparasite was Ctenocephalides felis. Among the ticks, the exophilic Haemaphysalis spp. were the commonest, including species that are not typically linked with companion animals (Haemaphysalis spinulosa and Haemaphysalis elliptica). The most prevalent pathogens found in the blood and fleas were Bartonella henselae and Mycoplasma haemofelis. In the ticks, the dog-associated Hepatozoon canis was most commonly found. A high degree of co-parasitism was found in all countries and habitats. Conclusions Our continent-wide standardized field study highlights the cat’s potential to serve as a reservoir of pathogens that can be transmitted to humans or livestock, especially when cats are expected to become more commonly kept in African villages and towns

The global decline of cheetah Acinonyx jubatus and what it means for conservation

Establishing and maintaining protected areas (PAs) are key tools for biodiversity conservation. However, this approach is insufficient for many species, particularly those that are wide-ranging and sparse. The cheetah Acinonyx jubatus exemplifies such a species and faces extreme challenges to its survival. Here, we show that the global population is estimated at ∼7,100 individuals and confined to 9% of its historical distributional range. However, the majority of current range (77%) occurs outside of PAs, where the species faces multiple threats. Scenario modeling shows that, where growth rates are suppressed outside PAs, extinction rates increase rapidly as the proportion of population protected declines. Sensitivity analysis shows that growth rates within PAs have to be high if they are to compensate for declines outside. Susceptibility of cheetah to rapid decline is evidenced by recent rapid contraction in range, supporting an uplisting of the International Union for the Conservation of Nature (IUCN) Red List threat assessment to endangered. Our results are applicable to other protection-reliant species, which may be subject to systematic underestimation of threat when there is insufficient information outside PAs. Ultimately, conserving many of these species necessitates a paradigm shift in conservation toward a holistic approach that incentivizes protection and promotes sustainable human–wildlife coexistence across large multiple-use landscapes

When wildlife comes to town: interaction of sylvatic and domestic host animals in transmission of <i>Echinococcus</i> spp. in Namibia

The present study was conducted in the isolated desert town of Oranjemund in the far south of Namibia. It is an extremely arid region where no livestock husbandry is practiced and only animals adapted to the desert can be found. However, in and around the city, artificial irrigation maintains lush green patches of grass that attract wild animals, in particular oryx antelopes (Oryx gazella). In 2015 four oryx antelopes were euthanised due to poor conditions and a post-mortem examination was conducted. Two were found positive for cystic echinococcosis and 16 cysts were collected for molecular analyses. In addition, faecal samples from black-backed jackals (n=5) and domestic dogs (n=9), which were regularly observed to feed on oryx carcasses, were collected and taeniid eggs isolated. Parasite species identification of the cysts and eggs was done by amplifying and sequencing the mitochondrial nad1 gene. Both oryx antelopes were found infected with E. ortleppi and one co-infected with E. canadensis G6/7. Both Echinococcus species were able to develop fertile cysts in oryx, making oryx antelopes competent hosts for these parasites. Therefore, the analysis of faecal samples was of high interest and although the numbers were quite small, taeniid eggs were found in three out of five faecal samples of jackals and in all nine dog samples. However, species determination was only successful with two jackal and one dog sample. All three were positive for E. canadensis G6/7. The absence of E. ortleppi may be due to the low number of faecal samples examined. In our small study, we discovered a rather unique lifecycle of Echinococcus spp. between jackals and domestic dogs as definitive hosts and oryx antelopes as intermediate hosts. Here, the presence of E. canadensis G6/7 is of particular concern, as it is the second most important causative agent of CE in humans

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A century of decline: Loss of genetic diversity in a southern African lion‐conservation stronghold

Aim: There is a dearth of evidence that determines the genetic diversity of populations contained within present-day protected areas compared with their historical state prior to large-scale species declines, making inferences about a species’ conservation genetic status difficult to assess. The aim of this paper was to demonstrate the use of historical specimens to assess the change in genetic diversity over a defined spatial area. Location: Like many other species, African lion populations (Panthera leo) are undergoing dramatic contractions in range and declines in numbers, motivating the identification of a number of lion-conservation strongholds across East and southern Africa. We focus on one such stronghold, the Kavango–Zambezi transfrontier conservation area (KAZA) of Botswana, Namibia, Zambia and Zimbabwe. Methods: We compare genetic diversity between historical museum specimens, collected during the late 19th and early 20th century, with samples from the modern extant population. We use 16 microsatellite markers and sequence 337 base pairs of the hypervariable control region (HVR1) of the mitochondrial genome. We use bootstrap resampling to allow for comparisons between the historical and modern data. Results: We show that the genetic diversity of the modern population was reduced by 12%–17%, with a reduction in allelic diversity of approximately 15%, compared to historical populations, in addition to having lost a number of mitochondrial haplotypes. We also identify a number of “ghost alleles” in the historical samples which are no longer present in the extant population. Main Conclusions: We argue a rapid decline in allelic richness after 1895 suggests the erosion of genetic diversity coincides with the rise of a European colonial presence and the outbreak of rinderpest in the region. Our results support the need to improved connectivity between protected areas in order to prevent further loss of genetic diversity in the region

A century of decline: loss of genetic diversity in a southern African lion-conservation stronghold

Aim: There is a dearth of evidence that determines the genetic diversity of populations contained within present-day protected areas compared with their historical state prior to large-scale species declines, making inferences about a species’ conservation genetic status difficult to assess. The aim of this paper was to demonstrate the use of historical specimens to assess the change in genetic diversity over a defined spatial area. Location: Like many other species, African lion populations (Panthera leo) are undergoing dramatic contractions in range and declines in numbers, motivating the identification of a number of lion-conservation strongholds across East and southern Africa. We focus on one such stronghold, the Kavango–Zambezi transfrontier conservation area (KAZA) of Botswana, Namibia, Zambia and Zimbabwe. Methods: We compare genetic diversity between historical museum specimens, collected during the late 19th and early 20th century, with samples from the modern extant population. We use 16 microsatellite markers and sequence 337 base pairs of the hypervariable control region (HVR1) of the mitochondrial genome. We use bootstrap resampling to allow for comparisons between the historical and modern data. Results: We show that the genetic diversity of the modern population was reduced by 12%–17%, with a reduction in allelic diversity of approximately 15%, compared to historical populations, in addition to having lost a number of mitochondrial haplotypes. We also identify a number of “ghost alleles” in the historical samples which are no longer present in the extant population. Main Conclusions: We argue a rapid decline in allelic richness after 1895 suggests the erosion of genetic diversity coincides with the rise of a European colonial presence and the outbreak of rinderpest in the region. Our results support the need to improved connectivity between protected areas in order to prevent further loss of genetic diversity in the region

A community approach of pathogens and their arthropod vectors (ticks and fleas) in dogs of African Sub-Sahara

Background Arthropod-borne pathogens and their vectors are present throughout Africa. They have been well-studied in livestock of sub-Saharan Africa, but poorly in companion animals. Given the socio-economic importance of companion animals, the African Small Companion Animal Network (AFSCAN), as part of the WSAVA Foundation, initiated a standardized multi-country surveillance study. Methods Macro-geographic variation in ectoparasite (ticks and fleas) and pathogen communities in dogs was assessed through molecular screening of approximately 100 infested dogs in each of six countries (Ghana, Kenya, Nigeria, Tanzania, Uganda and Namibia), both in rural and urban settings. The most important intrinsic and extrinsic risk factors within the subpopulation of infested dogs were evaluated. Results Despite the large macro-geographic variation in the dogs screened, there was no consistent difference between East and West Africa in terms of the diversity and numbers of ticks. The highest and lowest numbers of ticks were found in Nigeria and Namibia, respectively. Most often, there was a higher diversity of ticks in rural habitats than in urban habitats, although the highest diversity was observed in an urban Uganda setting. With the exception of Namibia, more fleas were collected in rural areas. We identified tick species (including Haemaphysalis spinulosa) as well as zoonotic pathogens (Coxiella burnetti, Trypanosoma spp.) that are not classically associated with companion animals. Rhipicephalus sanguineus was the most abundant tick, with a preference for urban areas. Exophilic ticks, such as Haemaphysalis spp., were more often found in rural areas. Several multi-host ticks occurred in urban areas. For R. sanguineus, housing conditions and additional pets were relevant factors in terms of infestation, while for a rural tick species (Haemaphysalis elliptica), free-roaming dogs were more often infested. Tick occurrence was associated to the use of endoparasiticide, but not to the use of ectoparasiticide. The most prevalent tick-borne pathogen was Hepatozoon canis followed by Ehrlichia canis. High levels of co-parasitism were observed in all countries and habitats. Conclusions As dogs share a common environment with people, they have the potential to extend the network of pathogen transmission to humans. Our study will help epidemiologists to provide recommendations for surveillance and prevention of pathogens in dogs and humans