PONDER - A Real time software backend for pulsar and IPS observations at the Ooty Radio Telescope

This paper describes a new real-time versatile backend, the Pulsar Ooty Radio Telescope New Digital Efficient Receiver (PONDER), which has been designed to operate along with the legacy analog system of the Ooty Radio Telescope (ORT). PONDER makes use of the current state of the art computing hardware, a Graphical Processing Unit (GPU) and sufficiently large disk storage to support high time resolution real-time data of pulsar observations, obtained by coherent dedispersion over a bandpass of 16 MHz. Four different modes for pulsar observations are implemented in PONDER to provide standard reduced data products, such as time-stamped integrated profiles and dedispersed time series, allowing faster avenues to scientific results for a variety of pulsar studies. Additionally, PONDER also supports general modes of interplanetary scintillation (IPS) measurements and very long baseline interferometry data recording. The IPS mode yields a single polarisation correlated time series of solar wind scintillation over a bandwidth of about four times larger (16 MHz) than that of the legacy system as well as its fluctuation spectrum with high temporal and frequency resolutions. The key point is that all the above modes operate in real time. This paper presents the design aspects of PONDER and outlines the design methodology for future similar backends. It also explains the principal operations of PONDER, illustrates its capabilities for a variety of pulsar and IPS observations and demonstrates its usefulness for a variety of astrophysical studies using the high sensitivity of the ORT.Comment: 25 pages, 14 figures, Accepted by Experimental Astronom

Simultaneous multi-frequency single pulse observations of pulsars

We performed simultaneous observations at 326.5 MHz with the Ooty Radio Telescope and at 326, 610 and 1308 MHz with the Giant Meterwave Radio Telescope for a sample of 12 pulsars, where frequency dependent single pulse behaviour was reported. The single pulse sequences were analysed with fluctuation analysis, sensitive to both the average fluctuation properties (using longitude resolved fluctuation spectrum and two-dimensional fluctuation spectrum) as well as temporal changes in these (using sliding two-dimensional fluctuation spectrum ) to establish concurrent changes in subpulse drifting over the multiple frequencies employed. We report subpulse drifting in PSR J0934$-$5249 for the first time. We also report pulse nulling measurements in PSRs J0934$-$5249, B1508+55, J1822$-$2256, B1845$-$19 and J1901$-$0906 for the first time. Our measurements of subpulse drifting and pulse nulling for the rest of the pulsars are consistent with previously reported values. Contrary to previous belief, we find no evidence for a frequency dependent drift pattern in PSR B2016+28 implied by non-simultaneous observations by Oster et al. (1977). In PSRs B1237+25, J1822$-$2256, J1901$-$0906 and B2045$-$16, our longer and more sensitive observations reveal multiple drift rates with distinct P3. We increase the sample of pulsars showing concurrent nulling across multiple frequencies by more than 100 percent, adding 4 more pulsars to this sample. Our results confirm and further strengthen the understanding that the subpulse drifting and pulse nulling are broadband consistent with previous studies (Gajjar et al. 2014a; Rankin 1986; Weltevrede et al. 2007) and are closely tied to physics of polar gap.Comment: 22 pages, 44 figures, Single pulse studies of pulsars, accepted by A&

Detection of long nulls in PSR B1706−-16, a pulsar with large timing irregularities

Single pulse observations, characterizing in detail, the nulling behaviour of PSR B1706$-$16 are being reported for the first time in this paper. Our regular long duration monitoring of this pulsar reveals long nulls of 2 to 5 hours with an overall nulling fraction of 31$\pm$2\%. The pulsar shows two distinct phases of emission. It is usually in an active phase, characterized by pulsations interspersed with shorter nulls, with a nulling fraction of about 15 \%, but it also rarely switches to an inactive phase, consisting of long nulls. The nulls in this pulsar are concurrent between 326.5 and 610 MHz. Profile mode changes accompanied by changes in fluctuation properties are seen in this pulsar, which switches from mode A before a null to mode B after the null. The distribution of null durations in this pulsar is bimodal. With its occasional long nulls, PSR B1706$-$16 joins the small group of intermediate nullers, which lie between the classical nullers and the intermittent pulsars. Similar to other intermediate nullers, PSR B1706$-$16 shows high timing noise, which could be due to its rare long nulls if one assumes that the slowdown rate during such nulls is different from that during the bursts.Comment: Accepted for publication in MNRA

Scatter broadening measurements of 124 pulsars at 327 MHz

We present the measurements of scatter broadening time-scales ($\tau_{sc}$) for 124 pulsars at 327 MHz, using the upgraded Ooty Radio Telescope (ORT). These pulsars lie in the dispersion measure range of 37 $-$ 503 pc cm$^{-3}$ and declination ($\delta$) range of $-$57$^{\circ} < \delta< 60^{\circ}$. New $\tau_{sc}$ estimates for 58 pulsars are presented, increasing the sample of all such measurements by about 40% at 327 MHz. Using all available $\tau_{sc}$ measurements in the literature, we investigate the dependence of $\tau_{sc}$ on dispersion measure. Our measurements, together with previously reported values for $\tau_{sc}$, affirm that the ionized interstellar medium upto 3 kpc is consistent with Kolmogorov spectrum, while it deviates significantly beyond this distance.Comment: 19 pages, 4 figures, accepted for publication in Ap

The Landscape of C. elegans 3'UTRs.

The 3’ untranslated regions (3’UTRs) of mRNAs have recently been shown to play major roles in gene regulation by interaction with small (21-26nt length) RNAs, such as microRNAs and small interfering RNAs (siRNAs). Recent studies highlight dynamic expression of small RNAs and provide limited evidence of utilization of alternative 3’UTR lengths (3’UTR isoforms) across development and specific cell types. However a comprehensive catalogue of 3’UTRome of an organism had been unavailable. By computational analysis of traditional and novel high-throughput sequence data, chapter two of this dissertation provides annotated 3’UTRs for more than 75% of the genes in the model organism Caenorhabditis elegans across the major stages of development. At the whole-transcriptome level, 3’UTRs express remarkable diversity in utilization of alternative poly-adenylation sites, which define the alternative 3’UTR isoforms, in ~40% of genes in the genome. We identified many isoforms are developmentally stage-specific and many genes show evidence of length switching between longer and shorter isoforms over development to maybe include or escape regulation from small RNAs or other RNA binding proteins. Thus, our study reveals the diversity and temporally regulated expression of 3’UTR isoforms as a complex mechanism in gene regulation at an unprecedented scope. The analysis provides large-scale evidence for multiple alternative 6nt sequence elements (PAS sites) near 3’ ends of 3’UTRs that are enriched in shorter, alternative isoforms. Chapter three of my dissertation also compared and combined the results of a parallel study of 3’UTRs in C. elegans further expanding transcriptome coverage of 3’UTRs. As an example of biological relevance for 3’UTR isoform usage, in chapter four we identified a potential connection between the synaptogenesis pathway and specific 3’UTR isoform usage in C. elegans. In related work described in chapter five, I analyzed small RNA sequences from isolated sperm and oocytes and identified and characterized a new class of germline-specific siRNAs, 26G-RNAs, which target coding regions and 3’UTRs of genes to regulate their target gene expression. These have been classified into two subclasses: 26G-RNAs generated in the male germline targeting genes involved in spermatogenesis, and maternally inherited 26G-RNAs targeting genes that function in zygotic development.Ph.D.BioinformaticsUniversity of Michigan, Horace H. Rackham School of Graduate Studieshttp://deepblue.lib.umich.edu/bitstream/2027.42/89776/1/arunpras_1.pd

Detection of radio emission from the gamma-ray pulsar J1732-3131 at 327 MHz

Although originally discovered as a radio-quiet gamma-ray pulsar, J1732-3131 has exhibited intriguing detections at decameter wavelengths. We report an extensive follow-up of the pulsar at 327 MHz with the Ooty radio telescope. Using the previously observed radio characteristics, and with an effective integration time of 60 hrs, we present a detection of the pulsar at a confidence level of 99.82%. The 327 MHz mean flux density is estimated to be 0.5-0.8 mJy, which establishes the pulsar to be a steep spectrum source and one of the least-luminous pulsars known to date. We also phase-aligned the radio and gamma-ray profiles of the pulsar, and measured the phase-offset between the main peaks in the two profiles to be 0.24$\pm$0.06. We discuss the observed phase-offset in the context of various trends exhibited by the radio-loud gamma-ray pulsar population, and suggest that the gamma-ray emission from J1732-3131 is best explained by outer magnetosphere models. Details of our analysis leading to the pulsar detection, and measurements of various parameters and their implications relevant to the pulsar's emission mechanism are presented.Comment: 8 pages, 6 figures; Accepted for publication in MNRA

Assemblage hétérogène Al/Fe par points par impulsion magnétique

Le soudage par impulsion magnétique est un procédé qui permet l’assemblage rapide (en quelques micro secondes) de matériaux similaires ou dissimilaires à l’état solide. Ce procédé consiste à générer des forces de Laplace dans une pièce conductrice au moyen d’un inducteur parcouru par un courant variable et intense. Pour pouvoir réaliser une soudure il est nécessaire d’accélérer la première pièce. Il faut donc assurer une distance suffisante entre les deux pièces (entrefer). Il est classiquement possible d’effectuer des soudures de tubes et de tôles à condition de ménager un entrefer entre les deux pièces à assembler. Dans le cadre de nos travaux nous avons développé une nouvelle façon de souder par points deux tôles placées l’une sur l’autre sans entrefer (Magnetic Pulse Spot Welding – MPSW). Ce nouveau procédé permet d’envisager l’assemblage hétérogène de structures automobile ou la connexion de batteries entre elles sans chauffage. Le procédé a été validé sur l’assemblage hétérogène Al/Fe. Des essais de traction quasi-statiques et dynamiques nous ont permis de démontrer la qualité des points de soudure

Regular Solar Radio Imaging at Arecibo: Space Weather Perspective of Evolution of Active Regions

The sudden release of magnetic energy on the Sun drives powerful solar flares and coronal mass ejections. The key issue is the difficulty in predicting the occurrence time and location of strong solar eruptions, i.e., those leading to the high impact space weather disturbances at the near-Earth environment. Solar radio imaging helps identify the magnetic field characteristics of active regions susceptible to intense flares and energetic coronal mass ejections. Mapping of the Sun at X-band (8.1 -- 9.3 GHz) with the 12-m radio telescope at the Arecibo Observatory allows monitoring of the evolution of the brightness temperature of active regions in association with the development of magnetic complexity, which can lead to strong eruptions. For a better forecasting strategy in the future, such ground-based radio observations of high-spatial and temporal resolution, along with a full polarization capability, would have tremendous potential not only to understand the magnetic activity of solar eruptions, but also for revealing the particle acceleration mechanism and additional exciting science.Comment: 11 pages and 3 figures (White Paper Submitted to `Decadal Survey for Solar and Space Physics (Heliophysics) 2024-2033'

High Precision Measurements of Interstellar Dispersion Measure with the upgraded GMRT

Pulsar radio emission undergoes dispersion due to the presence of free electrons in the interstellar medium (ISM). The dispersive delay in the arrival time of pulsar signal changes over time due to the varying ISM electron column density along the line of sight. Correcting for this delay accurately is crucial for the detection of nanohertz gravitational waves using Pulsar Timing Arrays. In this work, we present in-band and inter-band DM estimates of four pulsars observed with uGMRT over the timescale of a year using two different template alignment methods. The DMs obtained using both these methods show only subtle differences for PSR 1713+0747 and J1909$-$3744. A considerable offset is seen in the DM of PSR J1939+2134 and J2145$-$0750 between the two methods. This could be due to the presence of scattering in the former and profile evolution in the latter. We find that both methods are useful but could have a systematic offset between the DMs obtained. Irrespective of the template alignment methods followed, the precision on the DMs obtained is about $10^{-3}$ pc cm$^{-3}$ using only BAND3 and $10^{-4}$ pc cm$^{-3}$ after combining data from BAND3 and BAND5 of the uGMRT. In a particular result, we have detected a DM excess of about $5\times10^{-3}$ pc cm$^{-3}$ on 24 February 2019 for PSR J2145$-$0750. This excess appears to be due to the interaction region created by fast solar wind from a coronal hole and a coronal mass ejection (CME) observed from the Sun on that epoch. A detailed analysis of this interesting event is presented.Comment: 11 pages, 6 figures, 2 tables. Accepted by A&