The relationship between grape phylloxera and Fusarium root infection

Phylloxera seems to have key role in the fungal pathogen infection ratio while the fungal spread reduces the ability of phylloxera to reproduce. Intact roots of four-month-old grape plants were inoculated with phylloxera eggs in presence or absence of fungal pathogens. Fusarium solani SY7 infection was detected in all plant parts when grapevine roots were infested with phylloxera. The spread ratio of Fusarium solani SY7 increased from 74 to 100% of the infested plants with phylloxera. On the other hand, the phylloxera on F. solani SY7 infected roots were developed more slowly, since the nymphs and tuberosities were significantly decreased 49% and 31% respectively. The total plant biomass decreased to 29% in the presence of both F. solani SY 7 and phylloxera as compared to 9 and 17% in the presence of F. solani SY7 or phylloxera, respectively. This study sheds light on the correlation between fungi, phylloxera and grapevine and could help in the application of integrated pest management (IPM) programs against grape phylloxera

A simple approach to assess common root rot severity incidence data in wheat

Common root rot (CRR) of wheat, caused by Cochliobolus sativus, produces discoloration of the subcrown internodes (SCIs) and is directly related to yield losses. It is critical to clearly define and standardize the CRR assessment methods to avoid subjectivity and variability between assessors. Therefore, in this study, a comparison between the incidence (I; proportion of diseased SCIs) and the severity (S; proportion of SCI showing CRR symptoms) was investigated to explore the possibility of simplifying disease rating. Assessments were made visually at multiple sample sites in artificially- and naturally-inoculated research and production fields for three growing seasons. Significant differences (P = 0.001) in mean I and S values were found among cultivars, with values being consistently higher in the susceptible ones. However, CRR severity increased linearly as incidence increased in both Triticum durum and T. aestivum wheat. Their slopes and intercepts of the I–S relationship were consistent over the three growing seasons. This result may be considered a significant contribution for CRR assessment in wheat breeding programs

Diallel Analysis of Barley Resistance to Blumeria graminis

Powdery mildew, caused by Blumeria graminis f. sp. hordei (Bgh) is a common foliar disease of barley worldwide. The creation of new cultivars with durable resistance to Bgh is highly desirable. This work was undertaken to examine the resistance to Bgh in 10 genetically diverse barley parents, and to evaluate their general combining ability (GCA) and specific combining ability (SCA) effects toward determining the genetic basis of disease resistance. Two experiments, in a growth chamber on seedling and in the field on adult plant stages, were conducted using a randomized complete block design with three replicates. The parents expressing differences in their reactions to Bgh were crossed in a half-diallel mating design to generate 45 full-sib families. Genetic component analysis showed significant effects for both GCA and SCA under both experiments suggesting that additive as well as non-additive genetic mechanisms were involved in the expression of resistance in these parents. The estimate of narrow-sense heritability was 0.63 and broad-sense heritability was 98% indicating that selection for the disease resistance should be effective in these crosses. Resistant parents ‘Banteng, PK 30-136 and ‘Igri’ had significantly negative GCA effects, suggesting their prime suitability for use in barley breeding programs to improve resistance to Bgh

Salicylic acid pathway changes in barley plants challenged with either a biotrophic or a necrotrophic pathogen

The biotrophic Blumeria graminis (Bg) and the necrotrophic Cochliobolus sativus; (Cs) are economically important fungal pathogens of barley globally. To better understand barley mechanisms to resist these pathogens, changes in salicylic acid (SA) and its responsive genes particularly the pathogenesis related PR1, PR2, PR3 and PR5 were evaluated using qRT-PCR across four time points post infection. Data showed that SA contents significantly increased (P = 0.001) in infected plants of both resistant and susceptible genotypes 24 h post inoculation in comparison with non-infected controls. In addition, time-course tests revealed a notable contradiction in the defense-related genes expression patterns between barley and Bg and Cs interactions, showing that expression patterns of the same defense-associated genes were altered in adaptation to different pathogens. PR1 and PR2 genes were highlyactivated inresistant plants infected with the necrotrophic pathogen Cs rather than of the biotrophic one. The uniformity in barley defense response mechanisms could be in convention with the well-accepted notion that these responses are high intense in the resistant genotype. Our work provides useful information on the expected role of SA pathways in barley towards biotrophic and necroptrophic pathogens with different lifestyles

Transcriptome profile of early responsive genes in susceptible barley during Rhynchosporium secalis infection

Scald caused by Rhynchosporium secalis, is an economically important disease found worldwide. In order to profile genes and pathways responding to R. seclais infection, leaf transcriptomes before and after fungus inoculation in susceptible barley were compared using cDNA-AFLP technique. Transcriptional changes of 144 expressed sequence tags (ESTs) were observed, of which 18 have no previously described function. Functional annotation of the transcripts revealed a wide range of pathways including cell wall fortification, cytoskeleton construction and metabolic processes at different time points. Furthermore, the results of RT-PCR analysis on candidate genes, ABC transporters and lycine-specific demethylase were consistent with the cDNA-AFLP data in their expression patterns. Taken together, our data suggest that susceptible barley reprograms metabolic and biological processes to initiate a suitable response R. secalis infection

Salicylic acid and hydrogen peroxide accumulation in relation to hydrolyte leakage in barley plants challenged with Cochliobolus sativus

Spot blotch (SB) caused by the hemibiotrophic fungal pathogen Cochliobolus sativus is a destructive disease of barley worldwide. To better understand the mechanisms of resistance to this disease, the involvements of salicylic acid (SA), hydrogen peroxide (H2O2) and ion fluxes during the interaction between resistant and susceptible barley seedlings and C. sativus were investigated. Early SA accumulation in leaf tissues was accompanied with an increase in H2O2 concentration in both compatible and incompatible interactions. The resistant cultivar constitutively contained higher levels of H2O2 and SA, as well as during the 72 h as compared with the un-infected control (0 h). However, levels increased rapidly upon infection in both cultivars. Moreover, a markedly greater increase in ion fluxes from the compatible material compared with the incompatible one was observed. Results suggest that SA and H2O2 accumulation are important during both compatible and incompatible barley- C. sativus interactions

Changes in transcript and protein expression levels in the barley — Cochliobolus sativus interaction

Spot blotch, caused by Cochliobolus sativus, is an important barley disease which causes extensive grain yield losses worldwide. In order to investigate the molecular responses to the C. sativus infection, leaf transcriptome and proteome before and after fungus inoculation in a resistant barley genotype, were compared using cDNA-AFLP and 2-D PAGE techniques. A notable number of transcripts and proteins exhibiting significant differential accumulations were detected compared to the non-inoculated controls. Functional annotation of the transcripts and proteins revealed a wide range of pathways including cell wall fortification, metabolism, signal transduction and defence. Spearman correlations of the relative abundances for those genes represented by both an mRNA and a protein showed a weak (rs = 0.4; P < 0.001) relationship, indicating that post-transcriptional processes play a critical role in regulating the protein level during infection. Taken together, our study suggested that a joint analysis of the transcriptomic and proteomic of barley data can provide useful insights that may not be deciphered from individual analysis of mRNA or protein expressions

Transcriptome profiling reveals distinct gene activations in barley responding to scald and spot blotch

Scald (Rhynchosporium secalis; Rs) and spot blotch (Cochliobolus sativus; Cs) are important diseases of barley (Hordeum vulgare L.) worldwide. Similar mechanisms and gene transcripts are assumed to be involved in the barley defense response since both these pathogens are necrotrophic fungi. In the current study, the transcriptome in leaves of the same barley genotype WI2291 inoculated with Rs and Cs was compared at different times postinoculation. Comparison of data for barley Rs- and Cs- inoculated plants with mockinoculated plants revealed gene expression changes that included basal defense transcripts and transcripts specific to the establishment of a necrotrophic interaction with associated fungi. During barley–pathogen interaction pathway, WI2291 activated a higher number of genes and pathways in response to Rs infection than in response to Cs invasion. However, families of genes encoding pectin-degrading enzymes, secondary metabolism enzymes, transporters and peptidases are expanded to cover Rs and Cs at an early stage following inoculation. Our results demonstrate differences in the pathways and activated genes of barely cv. WI291challenged by Rs and Cs, and that expression patterns of the same defenseassociated genes were altered in adaptation to different pathogens. Our work provides new insights into the underlying mechanisms related to regulation of different pathways in response to fungal infection

Lipase production by Fusarium culmorum in solid state fermentation

Fusarium is a large genus of filamentous fungi which cause some of the most important diseases in agricultural and horticultural crops. This fungus is considered to be a useful producer of enzymes from an industrial point of view. In the present study, lipase production by Fusarium culmorum SY6 was investigated under solid-state fermentation (SSF). Among the several agronomic wastes, corn cob hulls and tomato pulp supported the highest yield of lipase (170 and 165 U/g of dry substrate, respectively) after five days of incubation. It was determined that pH 9 and 60°C gave optimumenzyme activity. The F. culmorum SY6 strain grown in SSF in a simple medium proved to be a promising microorganism for lipase production