62 research outputs found
Zone-Collapse Amorphization Mimicking the Negative Compressibility of a Porous Compound
A strongly anisotropic
architecture of stacked metal–organic
grids, with pores arranged through their eyes, has been revealed for
the new coordination polymer Ni(bipy)(hip)(H<sub>2</sub>O)<sub>2</sub>·DMF·CH<sub>3</sub>OH·H<sub>2</sub>O, where bipy is 4,4′-bipyridine and hip is 5-hydroxyisophthalic
acid. This porous crystal, when submerged in various nonpenetrating
oils used as the hydrostatic media, displays a negative volume compressibility.
This counterintuitive effect results in the zone amorphization injecting
the contents of collapsing pores into the retained crystalline portions
of the sample. This additional contents of the pores supports the
crystalline parts and prevents their amorphization
High-Pressure Preference for the Low <i>Z</i>′ Polymorph of a Molecular Crystal
High pressure destabilizes the high <i>Z</i>′
polymorph of 3-hydroxy-4,5-dimethyl-1-phenylpyridazin-6-one (<b>1</b>α); however, recrystallization is needed for obtaining
a low <i>Z</i>′, more dense polymorph. Three polymorphs
α, β, and γ can be monotonically compressed to 2.0
GPa at least. At ambient pressure <b>1</b> crystallizes in space
group <i>C</i>2/<i>c</i>, <i>Z</i>′
= 4 as polymorph <b>1</b>α, or as lower-density polymorph <b>1</b>β, of space group <i>P</i>2<sub>1</sub>/<i>c</i> and <i>Z</i>′ = 1. Polymorph β
is metastable, and after about one year, it transforms to phase α.
The isochoric recrystallization above 0.40 GPa yields a new polymorph
γ of space group <i>P</i>2<sub>1</sub>/<i>a</i> and <i>Z</i>′ reduced to 1. The γ polymorph
retrieved to ambient conditions for months has showed no signs of
transformations. The main motif of OH···O bonded chains
is retained in all three phases, but high pressure enforced identical
conformation of closely packed molecules and their identical crystal
environment in phase γ
Singularities in Molecular Conformation
The intramolecular coupling between
molecular groups leads to singularities
in the molecular conformation, acting like a switch in a molecular-scale
rotor. This, in turn, affects the potential-energy (<i>E</i><sub>p</sub>) barriers, acquiring a sharp shape originating from
superimposed <i>E</i><sub>p</sub> functions of the molecular
conformers with differently coupled methyl groups. The molecular conformation
fixed at the switching position results in the disordered methyl orientations
in the crystalline state. These general features have been observed
for the molecule of pinacolone. The structure of the pinacolone crystals
frozen at low-temperature isobaric and high-pressure isochoric conditions
has been determined
Conformationally Assisted Negative Area Compression in Methyl Benzoate
Methyl
benzoate (MB) freezes isobarically at 0.1 MPa below 261
K and isothermally at 296 K above 0.35 GPa in phase α, with
the molecules in energetically unfavorable twisted conformation. At
0.54 GPa, phase α undergoes a most unusual isostructural transition
to a new β phase. At the transition point the crystal is compressed
along [<i>x</i>] and expands along plane <i>yz</i>, which is analogous to negative Poisson’s ratio of −2.05.
Above 0.54 GPa, the MB molecules assume the planar conformation, by
2.70 kJ mol<sup>–1</sup> more stable than the twisted conformation
at ambient-pressure, and
arene and methyl H-donors are exchanged in the C–H···π
bonding pattern. The interplay between the crystal strain, molecular
conformation and the intermolecular interactions has been established
High-Pressure Crystallization and Thermodynamic Stability Study on the Resolution of High-Density Enantiomers from Low-Density Racemates
High-pressure recrystallization could be the cheapest
clean method
of resolving enantiomers from the racemates defying Wallach’s
rule. We have investigated the effect of pressure on sodium tartrate
monohydrate (NaTa·H2O), a notorious exception from
Wallach’s rule: both racemic polymorphs α-dl-NaTa·H2O and β-dl-NaTa·H2O are less dense than the enantiomers. According to the mobile-equilibrium
principle, such high-density enantiomorphs should spontaneously separate
under high pressures. The pressure dependence of the Gibbs free energy
explains the preferential crystallization of mixed enantiomers of
NaTa·H2O
Piezochromic Topology Switch in a Coordination Polymer
Abrupt
color changes coupled to a giant strain in the crystal of
coordination polymer CoCl<sub>2</sub>bpp (bpp = 1,3-bis(4-pyridyl)propane)
mark piezochromic reversible transformations at 1.93 GPa from blue
phase α to green phase β and at 2.39 GPa to colorless
phase γ. The clearly visible shape and color changes are ideal
for calibrating discrete pressure magnitudes associated with these
phase transitions. The crystal spectra have been measured and the
structures have been determined <i>in situ</i> under pressure
in a diamond-anvil cell. In phase α (of monoclinic space group <i>P</i>2<sub>1</sub>/<i>m</i>) and phase β (orthorhombic
space group <i>Pnmm</i>) the tetrahedral Co-coordination
is stepwise modified within the 1D chain topology, but in phase γ
(triclinic space group <i>P</i>1̅) the Co<sup>2+</sup> cations become octahedrally coordinated and the polymer topology
transforms to the 2D sheets
Piezochromic Porous Metal–Organic Framework
Pressure
changes the color of a new type of metal–organic
porous hybrid material CoBbcDabcoH<sub>2</sub>O. It is built of Co<sup>2+</sup> cations linked by 1,4-benzenedicabroxylate (Bdc) anions
and 1,4-diazabicyclo[2.2.2]octane (Dabco) molecules into 2-D grid-like
sheets, interconnected through OH···O bonds of water molecules to carboxylate H-acceptors. This first
piezochromic MOF, stable in air and in many solvents, is an ideal
ultraprecise sensor for pressure calibration. The color changes are
due to strains generated by pressure in the highly asymmetric crystal
field of Co<sup>2+</sup> octahedral coordination, involving four different
ligand types: a Dabco amine (twice), a monodentate carboxylate, a
chelating carboxylate, and a water molecule. At 0.33 GPa/296 K and
below 225 K/0.1 MPa a phase transition reduces the crystal symmetry
from monoclinic to triclinic system and changes the conformation and
orientation of linkers
Hydrogen Bonds NH···N in Compressed Benzimidazole Polymorphs
Two phase transitions in compressed benzimidazole polymorphs
reveal
a remarkable interplay of the H-site in NH···N hydrogen-bonded
aggregates and the crystal structure. The ambient-pressure polar polymorph
α, space group <i>Pna</i>2<sub>1</sub>, at <i>p</i><sub>1</sub> = 0.26 GPa transforms into centrosymmetric
phase β, space group <i>Pccn</i>, and above <i>p</i><sub>2</sub> = 2.26 GPa into another centrosymmetric polymorph
γ, space group <i>Pbca</i>. Single crystals of forms
α, β, and γ have been <i>in situ</i> grown
in isothermal and isochoric conditions in a diamond-anvil cell, and
their structures were determined by X-ray diffraction. Both at <i>p</i><sub>1</sub> and <i>p</i><sub>2</sub> the H-bond
distance N···N increases in the higher-pressure phase.
However, the H-atom always assumes the site for which the H···N
distance in the homoconjugated NH···N bond is shorter
High Pressure Effects on Zwitterionic and Thione Mesomeric Contributions in 2‑Benzimidazole-2-Thione
High pressure reduces
the zwitterionic mesomeric contribution and
increases the thione contribution in 2-benzimidazole-2-thione. These
mesomeric changes are manifested in the shortened bond S–C
and elongated bond C–N in the S–C–N moiety. These
transformations are consistent with the le Chatelier law, as they
counteract the increase of electrostatic interactions when the intermolecular
distances between electronegative sulfur atoms and arene π-electrons
are compressed. The changing interactions affect the crystal strain
and its structural transformations. Consequently, the crystal compression
and thermal expansion initially, until about 1.0 GPa, are inconsistent
with the inverse relationship rule of pressure and temperature effects.
Some anomalous features of the thermal expansion can be associated
with isostructural transformations of the crystal
Giant Anomalous Strain between High-Pressure Phases and the Mesomers of Urea
At
high pressure the urea crystal abruptly collapses in two stages. When
transforming from phase I to III at 0.48 GPa, the crystal volume is
abruptly compressed by 7.3%. At this transition a huge abrupt linear
compression to 65% along <i>a</i> and to 95% along <i>c</i> is partly compensated by an unprecedented abrupt negative
linear compression (i.e., expansion) to 148% along <i>b</i>. At another discontinuous transformation, at 2.8 GPa to phase IV,
the crystal still displays an abrupt negative linear compression to
106% along <i>c</i>. The intermediate phase III between
0.48 and 2.80 GPa increases the contribution of the zwitterionic mesomeric
structure of urea molecules and the formation of weak NH···N
bonds has been evidenced in phase III. The formation of phase II,
above 373 K and above 0.6 GPa reported by Bridgman, has not been confirmed
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