9 research outputs found
Supplementary Appendix from The Epigenetic Evolution of Glioma Is Determined by the <i>IDH1</i> Mutation Status and Treatment Regimen
- Author
- Adelheid Woehrer (285118)
- Allison K Lowman (18100119)
- Ana C deCarvalho (18100122)
- Ana C. deCarvalho (18100086)
- Ana Valeria Castro (18100125)
- Andrea Transou (18100128)
- Andrew R Brodbelt (14264588)
- Ann-Christin Hau (18100077)
- Ann-Christin Hau (18100131)
- Anna Golebiewska (733488)
- Anna Lasorella (15124960)
- Anna Lasorella (5555543)
- Annemiek Walenkamp (12893309)
- Annemiek Walenkamp (18100113)
- Annette M Molinaro (8571654)
- Antonio Iavarone (15124957)
- Antonio Iavarone (3814138)
- Azzam Ismail (3399350)
- Bart A Westerman (13421490)
- Bart A. Westerman (18100116)
- Bauke Ylstra (13241)
- Bauke Ylstra (15031418)
- Christoph Bock (29200)
- D. Ryan Ormond (18100101)
- D. Ryan Ormond (7908332)
- Daniel J Brat (13609624)
- Emre Kocakavuk (18100089)
- Emre Kocakavuk (18100134)
- Erwin G Van Meir (13609666)
- Erwin G. Van Meir (15010607)
- Floris P Barthel (18100137)
- Frederick S Varn (18100140)
- Frederick S. Varn (15017327)
- Fulvio D'Angelo (15124921)
- Fulvio D'Angelo (15168211)
- Gaetano Finocchiaro (109702)
- Ganesh Rao (795632)
- Gelareh Zadeh (160458)
- Guido Reifenberger (12335398)
- Guido Reifenberger (31600)
- Ho Keu ngNg (18100143)
- Hoon Kim (1964956)
- Houtan Noushmehr (14939975)
- Houtan Noushmehr (174733)
- Hrvoje Miletic (211715)
- Hui K Gan (9650552)
- Hui K. Gan (15011736)
- Indrani Datta (139666)
- Indrani Datta (18100065)
- Jack Rock (18100146)
- James M Snyder (18100149)
- Jason T Huse (18100152)
- Jennifer M Connelly (18100155)
- Jill S Barnholtz-Sloan (13609618)
- Jill S. Barnholtz-Sloan (14945857)
- Johanna M Niers (18100158)
- Johanna M. Niers (18100098)
- John F deGroot (18100161)
- Kadir C Akdemir (14318763)
- Kasthuri S Kannan (18100164)
- Keith L Ligon (9945582)
- Kenneth Aldape (11410196)
- Kenneth Aldape (9101353)
- Ketan R Bulsara (18100167)
- Kevin C Johnson (13352922)
- Kevin C. Johnson (18100080)
- Kristin D Alfaro (18100170)
- Laila M Poisson (13609654)
- Laila M. Poisson (10727128)
- Luciano Garofano (18100068)
- Luciano Garofano (18100173)
- Lucy F Stead (18100176)
- Lucy F. Stead (15084822)
- MacLean P Nasrallah (18100179)
- Marion Smits (18100110)
- Marion Smits (608568)
- Martin J van den Bent (18100182)
- Martin J. van den Bent (15011745)
- Mathilde C.M. Kouwenhoven (18100092)
- Mathilde CM Kouwenhoven (15783242)
- Michael Weller (15037908)
- Michael Weller (329740)
- Mohammad Hasanain (14835481)
- Mohammad Hasanain (15124915)
- Mustafa Khasraw (15036617)
- Mustafa Khasraw (6335354)
- Natalia S. Morosini (18100062)
- Peter A Sillevis Smitt (18100188)
- Peter A. Sillevis Smitt (18100107)
- Peter S LaViolette (18100191)
- Peter V Gould (18100185)
- Philip D Tatman (18100194)
- Pieter Wesseling (15045153)
- Pieter Wesseling (385172)
- Pim J French (13609633)
- Pim J. French (15044277)
- Rameen Beroukhim (60593)
- Roel G.W. Verhaak (14873733)
- Roel G.W. Verhaak (15118913)
- Simona Cazacu (18100083)
- Simona Migliozzi (18100095)
- Simona Migliozzi (18100197)
- Simone P Niclou (9621985)
- Simone P. Niclou (14938466)
- Spyridon Bakas (18100074)
- Spyridon Bakas (8119364)
- Steven Kalkanis (18100200)
- Sun Ha Paek (18100104)
- Sun Ha Paek (7314266)
- Susan C Short (14566525)
- Tabatabai Ghazaleh (18100203)
- Tathiane M Malta (18100206)
- Tathiane M. Malta (18100056)
- Thais S Sabedot (18100209)
- Thais S. Sabedot (18100059)
- Tobias Walbert (15365026)
- Tobias Weiss (15048014)
- Tobias Weiss (2092234)
- Ujjwal Baid (8462214)
- W. K. Alfred Yung (14988015)
- Wies Vallentgoed (18100071)
- Wies Vallentgoed (6201461)
- Publication venue
- Publication date
- 04/03/2024
- Field of study
List of collaborator authors</p
Table S5 from The Epigenetic Evolution of Glioma Is Determined by the <i>IDH1</i> Mutation Status and Treatment Regimen
- Author
- Adelheid Woehrer (285118)
- Allison K Lowman (18100119)
- Ana C deCarvalho (18100122)
- Ana C. deCarvalho (18100086)
- Ana Valeria Castro (18100125)
- Andrea Transou (18100128)
- Andrew R Brodbelt (14264588)
- Ann-Christin Hau (18100077)
- Ann-Christin Hau (18100131)
- Anna Golebiewska (733488)
- Anna Lasorella (15124960)
- Anna Lasorella (5555543)
- Annemiek Walenkamp (12893309)
- Annemiek Walenkamp (18100113)
- Annette M Molinaro (8571654)
- Antonio Iavarone (15124957)
- Antonio Iavarone (3814138)
- Azzam Ismail (3399350)
- Bart A Westerman (13421490)
- Bart A. Westerman (18100116)
- Bauke Ylstra (13241)
- Bauke Ylstra (15031418)
- Christoph Bock (29200)
- D. Ryan Ormond (18100101)
- D. Ryan Ormond (7908332)
- Daniel J Brat (13609624)
- Emre Kocakavuk (18100089)
- Emre Kocakavuk (18100134)
- Erwin G Van Meir (13609666)
- Erwin G. Van Meir (15010607)
- Floris P Barthel (18100137)
- Frederick S Varn (18100140)
- Frederick S. Varn (15017327)
- Fulvio D'Angelo (15124921)
- Fulvio D'Angelo (15168211)
- Gaetano Finocchiaro (109702)
- Ganesh Rao (795632)
- Gelareh Zadeh (160458)
- Guido Reifenberger (12335398)
- Guido Reifenberger (31600)
- Ho Keu ngNg (18100143)
- Hoon Kim (1964956)
- Houtan Noushmehr (14939975)
- Houtan Noushmehr (174733)
- Hrvoje Miletic (211715)
- Hui K Gan (9650552)
- Hui K. Gan (15011736)
- Indrani Datta (139666)
- Indrani Datta (18100065)
- Jack Rock (18100146)
- James M Snyder (18100149)
- Jason T Huse (18100152)
- Jennifer M Connelly (18100155)
- Jill S Barnholtz-Sloan (13609618)
- Jill S. Barnholtz-Sloan (14945857)
- Johanna M Niers (18100158)
- Johanna M. Niers (18100098)
- John F deGroot (18100161)
- Kadir C Akdemir (14318763)
- Kasthuri S Kannan (18100164)
- Keith L Ligon (9945582)
- Kenneth Aldape (11410196)
- Kenneth Aldape (9101353)
- Ketan R Bulsara (18100167)
- Kevin C Johnson (13352922)
- Kevin C. Johnson (18100080)
- Kristin D Alfaro (18100170)
- Laila M Poisson (13609654)
- Laila M. Poisson (10727128)
- Luciano Garofano (18100068)
- Luciano Garofano (18100173)
- Lucy F Stead (18100176)
- Lucy F. Stead (15084822)
- MacLean P Nasrallah (18100179)
- Marion Smits (18100110)
- Marion Smits (608568)
- Martin J van den Bent (18100182)
- Martin J. van den Bent (15011745)
- Mathilde C.M. Kouwenhoven (18100092)
- Mathilde CM Kouwenhoven (15783242)
- Michael Weller (15037908)
- Michael Weller (329740)
- Mohammad Hasanain (14835481)
- Mohammad Hasanain (15124915)
- Mustafa Khasraw (15036617)
- Mustafa Khasraw (6335354)
- Natalia S. Morosini (18100062)
- Peter A Sillevis Smitt (18100188)
- Peter A. Sillevis Smitt (18100107)
- Peter S LaViolette (18100191)
- Peter V Gould (18100185)
- Philip D Tatman (18100194)
- Pieter Wesseling (15045153)
- Pieter Wesseling (385172)
- Pim J French (13609633)
- Pim J. French (15044277)
- Rameen Beroukhim (60593)
- Roel G.W. Verhaak (14873733)
- Roel G.W. Verhaak (15118913)
- Simona Cazacu (18100083)
- Simona Migliozzi (18100095)
- Simona Migliozzi (18100197)
- Simone P Niclou (9621985)
- Simone P. Niclou (14938466)
- Spyridon Bakas (18100074)
- Spyridon Bakas (8119364)
- Steven Kalkanis (18100200)
- Sun Ha Paek (18100104)
- Sun Ha Paek (7314266)
- Susan C Short (14566525)
- Tabatabai Ghazaleh (18100203)
- Tathiane M Malta (18100206)
- Tathiane M. Malta (18100056)
- Thais S Sabedot (18100209)
- Thais S. Sabedot (18100059)
- Tobias Walbert (15365026)
- Tobias Weiss (15048014)
- Tobias Weiss (2092234)
- Ujjwal Baid (8462214)
- W. K. Alfred Yung (14988015)
- Wies Vallentgoed (18100071)
- Wies Vallentgoed (6201461)
- Publication venue
- Publication date
- 04/03/2024
- Field of study
Table S5: Treatment-related probes and samples (Related to Figure 3)
S5A: List of 69 IDHmut pairs with treatment information (ID of Initial and Recurrent samples and group assignment)
S5B: List of differentially methylated probes associated with treatment in IDHmut gliomas
S5C: List of differentially methylated probes associated with treatment in IDHmut astrocytomas
S5D: List of CpG-gene pairs (epigenetic regulation associated with treatment)</p
Table S2 from The Epigenetic Evolution of Glioma Is Determined by the <i>IDH1</i> Mutation Status and Treatment Regimen
- Author
- Adelheid Woehrer (285118)
- Allison K Lowman (18100119)
- Ana C deCarvalho (18100122)
- Ana C. deCarvalho (18100086)
- Ana Valeria Castro (18100125)
- Andrea Transou (18100128)
- Andrew R Brodbelt (14264588)
- Ann-Christin Hau (18100077)
- Ann-Christin Hau (18100131)
- Anna Golebiewska (733488)
- Anna Lasorella (15124960)
- Anna Lasorella (5555543)
- Annemiek Walenkamp (12893309)
- Annemiek Walenkamp (18100113)
- Annette M Molinaro (8571654)
- Antonio Iavarone (15124957)
- Antonio Iavarone (3814138)
- Azzam Ismail (3399350)
- Bart A Westerman (13421490)
- Bart A. Westerman (18100116)
- Bauke Ylstra (13241)
- Bauke Ylstra (15031418)
- Christoph Bock (29200)
- D. Ryan Ormond (18100101)
- D. Ryan Ormond (7908332)
- Daniel J Brat (13609624)
- Emre Kocakavuk (18100089)
- Emre Kocakavuk (18100134)
- Erwin G Van Meir (13609666)
- Erwin G. Van Meir (15010607)
- Floris P Barthel (18100137)
- Frederick S Varn (18100140)
- Frederick S. Varn (15017327)
- Fulvio D'Angelo (15124921)
- Fulvio D'Angelo (15168211)
- Gaetano Finocchiaro (109702)
- Ganesh Rao (795632)
- Gelareh Zadeh (160458)
- Guido Reifenberger (12335398)
- Guido Reifenberger (31600)
- Ho Keu ngNg (18100143)
- Hoon Kim (1964956)
- Houtan Noushmehr (14939975)
- Houtan Noushmehr (174733)
- Hrvoje Miletic (211715)
- Hui K Gan (9650552)
- Hui K. Gan (15011736)
- Indrani Datta (139666)
- Indrani Datta (18100065)
- Jack Rock (18100146)
- James M Snyder (18100149)
- Jason T Huse (18100152)
- Jennifer M Connelly (18100155)
- Jill S Barnholtz-Sloan (13609618)
- Jill S. Barnholtz-Sloan (14945857)
- Johanna M Niers (18100158)
- Johanna M. Niers (18100098)
- John F deGroot (18100161)
- Kadir C Akdemir (14318763)
- Kasthuri S Kannan (18100164)
- Keith L Ligon (9945582)
- Kenneth Aldape (11410196)
- Kenneth Aldape (9101353)
- Ketan R Bulsara (18100167)
- Kevin C Johnson (13352922)
- Kevin C. Johnson (18100080)
- Kristin D Alfaro (18100170)
- Laila M Poisson (13609654)
- Laila M. Poisson (10727128)
- Luciano Garofano (18100068)
- Luciano Garofano (18100173)
- Lucy F Stead (18100176)
- Lucy F. Stead (15084822)
- MacLean P Nasrallah (18100179)
- Marion Smits (18100110)
- Marion Smits (608568)
- Martin J van den Bent (18100182)
- Martin J. van den Bent (15011745)
- Mathilde C.M. Kouwenhoven (18100092)
- Mathilde CM Kouwenhoven (15783242)
- Michael Weller (15037908)
- Michael Weller (329740)
- Mohammad Hasanain (14835481)
- Mohammad Hasanain (15124915)
- Mustafa Khasraw (15036617)
- Mustafa Khasraw (6335354)
- Natalia S. Morosini (18100062)
- Peter A Sillevis Smitt (18100188)
- Peter A. Sillevis Smitt (18100107)
- Peter S LaViolette (18100191)
- Peter V Gould (18100185)
- Philip D Tatman (18100194)
- Pieter Wesseling (15045153)
- Pieter Wesseling (385172)
- Pim J French (13609633)
- Pim J. French (15044277)
- Rameen Beroukhim (60593)
- Roel G.W. Verhaak (14873733)
- Roel G.W. Verhaak (15118913)
- Simona Cazacu (18100083)
- Simona Migliozzi (18100095)
- Simona Migliozzi (18100197)
- Simone P Niclou (9621985)
- Simone P. Niclou (14938466)
- Spyridon Bakas (18100074)
- Spyridon Bakas (8119364)
- Steven Kalkanis (18100200)
- Sun Ha Paek (18100104)
- Sun Ha Paek (7314266)
- Susan C Short (14566525)
- Tabatabai Ghazaleh (18100203)
- Tathiane M Malta (18100206)
- Tathiane M. Malta (18100056)
- Thais S Sabedot (18100209)
- Thais S. Sabedot (18100059)
- Tobias Walbert (15365026)
- Tobias Weiss (15048014)
- Tobias Weiss (2092234)
- Ujjwal Baid (8462214)
- W. K. Alfred Yung (14988015)
- Wies Vallentgoed (18100071)
- Wies Vallentgoed (6201461)
- Publication venue
- Publication date
- 04/03/2024
- Field of study
Table S2: List of 132 pairs (ID of Initial and Recurrent samples)</p
Supp Figures from The Epigenetic Evolution of Glioma Is Determined by the <i>IDH1</i> Mutation Status and Treatment Regimen
- Author
- Adelheid Woehrer (285118)
- Allison K Lowman (18100119)
- Ana C deCarvalho (18100122)
- Ana C. deCarvalho (18100086)
- Ana Valeria Castro (18100125)
- Andrea Transou (18100128)
- Andrew R Brodbelt (14264588)
- Ann-Christin Hau (18100077)
- Ann-Christin Hau (18100131)
- Anna Golebiewska (733488)
- Anna Lasorella (15124960)
- Anna Lasorella (5555543)
- Annemiek Walenkamp (12893309)
- Annemiek Walenkamp (18100113)
- Annette M Molinaro (8571654)
- Antonio Iavarone (15124957)
- Antonio Iavarone (3814138)
- Azzam Ismail (3399350)
- Bart A Westerman (13421490)
- Bart A. Westerman (18100116)
- Bauke Ylstra (13241)
- Bauke Ylstra (15031418)
- Christoph Bock (29200)
- D. Ryan Ormond (18100101)
- D. Ryan Ormond (7908332)
- Daniel J Brat (13609624)
- Emre Kocakavuk (18100089)
- Emre Kocakavuk (18100134)
- Erwin G Van Meir (13609666)
- Erwin G. Van Meir (15010607)
- Floris P Barthel (18100137)
- Frederick S Varn (18100140)
- Frederick S. Varn (15017327)
- Fulvio D'Angelo (15124921)
- Fulvio D'Angelo (15168211)
- Gaetano Finocchiaro (109702)
- Ganesh Rao (795632)
- Gelareh Zadeh (160458)
- Guido Reifenberger (12335398)
- Guido Reifenberger (31600)
- Ho Keu ngNg (18100143)
- Hoon Kim (1964956)
- Houtan Noushmehr (14939975)
- Houtan Noushmehr (174733)
- Hrvoje Miletic (211715)
- Hui K Gan (9650552)
- Hui K. Gan (15011736)
- Indrani Datta (139666)
- Indrani Datta (18100065)
- Jack Rock (18100146)
- James M Snyder (18100149)
- Jason T Huse (18100152)
- Jennifer M Connelly (18100155)
- Jill S Barnholtz-Sloan (13609618)
- Jill S. Barnholtz-Sloan (14945857)
- Johanna M Niers (18100158)
- Johanna M. Niers (18100098)
- John F deGroot (18100161)
- Kadir C Akdemir (14318763)
- Kasthuri S Kannan (18100164)
- Keith L Ligon (9945582)
- Kenneth Aldape (11410196)
- Kenneth Aldape (9101353)
- Ketan R Bulsara (18100167)
- Kevin C Johnson (13352922)
- Kevin C. Johnson (18100080)
- Kristin D Alfaro (18100170)
- Laila M Poisson (13609654)
- Laila M. Poisson (10727128)
- Luciano Garofano (18100068)
- Luciano Garofano (18100173)
- Lucy F Stead (18100176)
- Lucy F. Stead (15084822)
- MacLean P Nasrallah (18100179)
- Marion Smits (18100110)
- Marion Smits (608568)
- Martin J van den Bent (18100182)
- Martin J. van den Bent (15011745)
- Mathilde C.M. Kouwenhoven (18100092)
- Mathilde CM Kouwenhoven (15783242)
- Michael Weller (15037908)
- Michael Weller (329740)
- Mohammad Hasanain (14835481)
- Mohammad Hasanain (15124915)
- Mustafa Khasraw (15036617)
- Mustafa Khasraw (6335354)
- Natalia S. Morosini (18100062)
- Peter A Sillevis Smitt (18100188)
- Peter A. Sillevis Smitt (18100107)
- Peter S LaViolette (18100191)
- Peter V Gould (18100185)
- Philip D Tatman (18100194)
- Pieter Wesseling (15045153)
- Pieter Wesseling (385172)
- Pim J French (13609633)
- Pim J. French (15044277)
- Rameen Beroukhim (60593)
- Roel G.W. Verhaak (14873733)
- Roel G.W. Verhaak (15118913)
- Simona Cazacu (18100083)
- Simona Migliozzi (18100095)
- Simona Migliozzi (18100197)
- Simone P Niclou (9621985)
- Simone P. Niclou (14938466)
- Spyridon Bakas (18100074)
- Spyridon Bakas (8119364)
- Steven Kalkanis (18100200)
- Sun Ha Paek (18100104)
- Sun Ha Paek (7314266)
- Susan C Short (14566525)
- Tabatabai Ghazaleh (18100203)
- Tathiane M Malta (18100206)
- Tathiane M. Malta (18100056)
- Thais S Sabedot (18100209)
- Thais S. Sabedot (18100059)
- Tobias Walbert (15365026)
- Tobias Weiss (15048014)
- Tobias Weiss (2092234)
- Ujjwal Baid (8462214)
- W. K. Alfred Yung (14988015)
- Wies Vallentgoed (18100071)
- Wies Vallentgoed (6201461)
- Publication venue
- Publication date
- 04/03/2024
- Field of study
Supp Figures</p
Table S4 from The Epigenetic Evolution of Glioma Is Determined by the <i>IDH1</i> Mutation Status and Treatment Regimen
- Author
- Adelheid Woehrer (285118)
- Allison K Lowman (18100119)
- Ana C deCarvalho (18100122)
- Ana C. deCarvalho (18100086)
- Ana Valeria Castro (18100125)
- Andrea Transou (18100128)
- Andrew R Brodbelt (14264588)
- Ann-Christin Hau (18100077)
- Ann-Christin Hau (18100131)
- Anna Golebiewska (733488)
- Anna Lasorella (15124960)
- Anna Lasorella (5555543)
- Annemiek Walenkamp (12893309)
- Annemiek Walenkamp (18100113)
- Annette M Molinaro (8571654)
- Antonio Iavarone (15124957)
- Antonio Iavarone (3814138)
- Azzam Ismail (3399350)
- Bart A Westerman (13421490)
- Bart A. Westerman (18100116)
- Bauke Ylstra (13241)
- Bauke Ylstra (15031418)
- Christoph Bock (29200)
- D. Ryan Ormond (18100101)
- D. Ryan Ormond (7908332)
- Daniel J Brat (13609624)
- Emre Kocakavuk (18100089)
- Emre Kocakavuk (18100134)
- Erwin G Van Meir (13609666)
- Erwin G. Van Meir (15010607)
- Floris P Barthel (18100137)
- Frederick S Varn (18100140)
- Frederick S. Varn (15017327)
- Fulvio D'Angelo (15124921)
- Fulvio D'Angelo (15168211)
- Gaetano Finocchiaro (109702)
- Ganesh Rao (795632)
- Gelareh Zadeh (160458)
- Guido Reifenberger (12335398)
- Guido Reifenberger (31600)
- Ho Keu ngNg (18100143)
- Hoon Kim (1964956)
- Houtan Noushmehr (14939975)
- Houtan Noushmehr (174733)
- Hrvoje Miletic (211715)
- Hui K Gan (9650552)
- Hui K. Gan (15011736)
- Indrani Datta (139666)
- Indrani Datta (18100065)
- Jack Rock (18100146)
- James M Snyder (18100149)
- Jason T Huse (18100152)
- Jennifer M Connelly (18100155)
- Jill S Barnholtz-Sloan (13609618)
- Jill S. Barnholtz-Sloan (14945857)
- Johanna M Niers (18100158)
- Johanna M. Niers (18100098)
- John F deGroot (18100161)
- Kadir C Akdemir (14318763)
- Kasthuri S Kannan (18100164)
- Keith L Ligon (9945582)
- Kenneth Aldape (11410196)
- Kenneth Aldape (9101353)
- Ketan R Bulsara (18100167)
- Kevin C Johnson (13352922)
- Kevin C. Johnson (18100080)
- Kristin D Alfaro (18100170)
- Laila M Poisson (13609654)
- Laila M. Poisson (10727128)
- Luciano Garofano (18100068)
- Luciano Garofano (18100173)
- Lucy F Stead (18100176)
- Lucy F. Stead (15084822)
- MacLean P Nasrallah (18100179)
- Marion Smits (18100110)
- Marion Smits (608568)
- Martin J van den Bent (18100182)
- Martin J. van den Bent (15011745)
- Mathilde C.M. Kouwenhoven (18100092)
- Mathilde CM Kouwenhoven (15783242)
- Michael Weller (15037908)
- Michael Weller (329740)
- Mohammad Hasanain (14835481)
- Mohammad Hasanain (15124915)
- Mustafa Khasraw (15036617)
- Mustafa Khasraw (6335354)
- Natalia S. Morosini (18100062)
- Peter A Sillevis Smitt (18100188)
- Peter A. Sillevis Smitt (18100107)
- Peter S LaViolette (18100191)
- Peter V Gould (18100185)
- Philip D Tatman (18100194)
- Pieter Wesseling (15045153)
- Pieter Wesseling (385172)
- Pim J French (13609633)
- Pim J. French (15044277)
- Rameen Beroukhim (60593)
- Roel G.W. Verhaak (14873733)
- Roel G.W. Verhaak (15118913)
- Simona Cazacu (18100083)
- Simona Migliozzi (18100095)
- Simona Migliozzi (18100197)
- Simone P Niclou (9621985)
- Simone P. Niclou (14938466)
- Spyridon Bakas (18100074)
- Spyridon Bakas (8119364)
- Steven Kalkanis (18100200)
- Sun Ha Paek (18100104)
- Sun Ha Paek (7314266)
- Susan C Short (14566525)
- Tabatabai Ghazaleh (18100203)
- Tathiane M Malta (18100206)
- Tathiane M. Malta (18100056)
- Thais S Sabedot (18100209)
- Thais S. Sabedot (18100059)
- Tobias Walbert (15365026)
- Tobias Weiss (15048014)
- Tobias Weiss (2092234)
- Ujjwal Baid (8462214)
- W. K. Alfred Yung (14988015)
- Wies Vallentgoed (18100071)
- Wies Vallentgoed (6201461)
- Publication venue
- Publication date
- 04/03/2024
- Field of study
Table S4: Master regulators - list of samples and features (Related to Figure 2)
S4A: List of sample profiled for ChIP-seq
S4B: Results of H3K4me3 differential analysis
S4C: Results of H3K27Ac differential analysis
S4D: Results of gene expression differential analysis
S4E: List of IDHmut non-codels samples profiled for both gene expression and DNA methylation
S4F: List of hypomethylated probes between IDHmut non-codel initial and first recurrent pairs
S4G: List of anticorrelated genes
S4H: List of HOXD13 predicted targets</p
Table S1 from The Epigenetic Evolution of Glioma Is Determined by the <i>IDH1</i> Mutation Status and Treatment Regimen
- Author
- Adelheid Woehrer (285118)
- Allison K Lowman (18100119)
- Ana C deCarvalho (18100122)
- Ana C. deCarvalho (18100086)
- Ana Valeria Castro (18100125)
- Andrea Transou (18100128)
- Andrew R Brodbelt (14264588)
- Ann-Christin Hau (18100077)
- Ann-Christin Hau (18100131)
- Anna Golebiewska (733488)
- Anna Lasorella (15124960)
- Anna Lasorella (5555543)
- Annemiek Walenkamp (12893309)
- Annemiek Walenkamp (18100113)
- Annette M Molinaro (8571654)
- Antonio Iavarone (15124957)
- Antonio Iavarone (3814138)
- Azzam Ismail (3399350)
- Bart A Westerman (13421490)
- Bart A. Westerman (18100116)
- Bauke Ylstra (13241)
- Bauke Ylstra (15031418)
- Christoph Bock (29200)
- D. Ryan Ormond (18100101)
- D. Ryan Ormond (7908332)
- Daniel J Brat (13609624)
- Emre Kocakavuk (18100089)
- Emre Kocakavuk (18100134)
- Erwin G Van Meir (13609666)
- Erwin G. Van Meir (15010607)
- Floris P Barthel (18100137)
- Frederick S Varn (18100140)
- Frederick S. Varn (15017327)
- Fulvio D'Angelo (15124921)
- Fulvio D'Angelo (15168211)
- Gaetano Finocchiaro (109702)
- Ganesh Rao (795632)
- Gelareh Zadeh (160458)
- Guido Reifenberger (12335398)
- Guido Reifenberger (31600)
- Ho Keu ngNg (18100143)
- Hoon Kim (1964956)
- Houtan Noushmehr (14939975)
- Houtan Noushmehr (174733)
- Hrvoje Miletic (211715)
- Hui K Gan (9650552)
- Hui K. Gan (15011736)
- Indrani Datta (139666)
- Indrani Datta (18100065)
- Jack Rock (18100146)
- James M Snyder (18100149)
- Jason T Huse (18100152)
- Jennifer M Connelly (18100155)
- Jill S Barnholtz-Sloan (13609618)
- Jill S. Barnholtz-Sloan (14945857)
- Johanna M Niers (18100158)
- Johanna M. Niers (18100098)
- John F deGroot (18100161)
- Kadir C Akdemir (14318763)
- Kasthuri S Kannan (18100164)
- Keith L Ligon (9945582)
- Kenneth Aldape (11410196)
- Kenneth Aldape (9101353)
- Ketan R Bulsara (18100167)
- Kevin C Johnson (13352922)
- Kevin C. Johnson (18100080)
- Kristin D Alfaro (18100170)
- Laila M Poisson (13609654)
- Laila M. Poisson (10727128)
- Luciano Garofano (18100068)
- Luciano Garofano (18100173)
- Lucy F Stead (18100176)
- Lucy F. Stead (15084822)
- MacLean P Nasrallah (18100179)
- Marion Smits (18100110)
- Marion Smits (608568)
- Martin J van den Bent (18100182)
- Martin J. van den Bent (15011745)
- Mathilde C.M. Kouwenhoven (18100092)
- Mathilde CM Kouwenhoven (15783242)
- Michael Weller (15037908)
- Michael Weller (329740)
- Mohammad Hasanain (14835481)
- Mohammad Hasanain (15124915)
- Mustafa Khasraw (15036617)
- Mustafa Khasraw (6335354)
- Natalia S. Morosini (18100062)
- Peter A Sillevis Smitt (18100188)
- Peter A. Sillevis Smitt (18100107)
- Peter S LaViolette (18100191)
- Peter V Gould (18100185)
- Philip D Tatman (18100194)
- Pieter Wesseling (15045153)
- Pieter Wesseling (385172)
- Pim J French (13609633)
- Pim J. French (15044277)
- Rameen Beroukhim (60593)
- Roel G.W. Verhaak (14873733)
- Roel G.W. Verhaak (15118913)
- Simona Cazacu (18100083)
- Simona Migliozzi (18100095)
- Simona Migliozzi (18100197)
- Simone P Niclou (9621985)
- Simone P. Niclou (14938466)
- Spyridon Bakas (18100074)
- Spyridon Bakas (8119364)
- Steven Kalkanis (18100200)
- Sun Ha Paek (18100104)
- Sun Ha Paek (7314266)
- Susan C Short (14566525)
- Tabatabai Ghazaleh (18100203)
- Tathiane M Malta (18100206)
- Tathiane M. Malta (18100056)
- Thais S Sabedot (18100209)
- Thais S. Sabedot (18100059)
- Tobias Walbert (15365026)
- Tobias Weiss (15048014)
- Tobias Weiss (2092234)
- Ujjwal Baid (8462214)
- W. K. Alfred Yung (14988015)
- Wies Vallentgoed (18100071)
- Wies Vallentgoed (6201461)
- Publication venue
- Publication date
- 04/03/2024
- Field of study
Table S1: GLASS surgery-level clinical and molecular characteristics (N=354)</p
Table S3 from The Epigenetic Evolution of Glioma Is Determined by the <i>IDH1</i> Mutation Status and Treatment Regimen
- Author
- Adelheid Woehrer (285118)
- Allison K Lowman (18100119)
- Ana C deCarvalho (18100122)
- Ana C. deCarvalho (18100086)
- Ana Valeria Castro (18100125)
- Andrea Transou (18100128)
- Andrew R Brodbelt (14264588)
- Ann-Christin Hau (18100077)
- Ann-Christin Hau (18100131)
- Anna Golebiewska (733488)
- Anna Lasorella (15124960)
- Anna Lasorella (5555543)
- Annemiek Walenkamp (12893309)
- Annemiek Walenkamp (18100113)
- Annette M Molinaro (8571654)
- Antonio Iavarone (15124957)
- Antonio Iavarone (3814138)
- Azzam Ismail (3399350)
- Bart A Westerman (13421490)
- Bart A. Westerman (18100116)
- Bauke Ylstra (13241)
- Bauke Ylstra (15031418)
- Christoph Bock (29200)
- D. Ryan Ormond (18100101)
- D. Ryan Ormond (7908332)
- Daniel J Brat (13609624)
- Emre Kocakavuk (18100089)
- Emre Kocakavuk (18100134)
- Erwin G Van Meir (13609666)
- Erwin G. Van Meir (15010607)
- Floris P Barthel (18100137)
- Frederick S Varn (18100140)
- Frederick S. Varn (15017327)
- Fulvio D'Angelo (15124921)
- Fulvio D'Angelo (15168211)
- Gaetano Finocchiaro (109702)
- Ganesh Rao (795632)
- Gelareh Zadeh (160458)
- Guido Reifenberger (12335398)
- Guido Reifenberger (31600)
- Ho Keu ngNg (18100143)
- Hoon Kim (1964956)
- Houtan Noushmehr (14939975)
- Houtan Noushmehr (174733)
- Hrvoje Miletic (211715)
- Hui K Gan (9650552)
- Hui K. Gan (15011736)
- Indrani Datta (139666)
- Indrani Datta (18100065)
- Jack Rock (18100146)
- James M Snyder (18100149)
- Jason T Huse (18100152)
- Jennifer M Connelly (18100155)
- Jill S Barnholtz-Sloan (13609618)
- Jill S. Barnholtz-Sloan (14945857)
- Johanna M Niers (18100158)
- Johanna M. Niers (18100098)
- John F deGroot (18100161)
- Kadir C Akdemir (14318763)
- Kasthuri S Kannan (18100164)
- Keith L Ligon (9945582)
- Kenneth Aldape (11410196)
- Kenneth Aldape (9101353)
- Ketan R Bulsara (18100167)
- Kevin C Johnson (13352922)
- Kevin C. Johnson (18100080)
- Kristin D Alfaro (18100170)
- Laila M Poisson (13609654)
- Laila M. Poisson (10727128)
- Luciano Garofano (18100068)
- Luciano Garofano (18100173)
- Lucy F Stead (18100176)
- Lucy F. Stead (15084822)
- MacLean P Nasrallah (18100179)
- Marion Smits (18100110)
- Marion Smits (608568)
- Martin J van den Bent (18100182)
- Martin J. van den Bent (15011745)
- Mathilde C.M. Kouwenhoven (18100092)
- Mathilde CM Kouwenhoven (15783242)
- Michael Weller (15037908)
- Michael Weller (329740)
- Mohammad Hasanain (14835481)
- Mohammad Hasanain (15124915)
- Mustafa Khasraw (15036617)
- Mustafa Khasraw (6335354)
- Natalia S. Morosini (18100062)
- Peter A Sillevis Smitt (18100188)
- Peter A. Sillevis Smitt (18100107)
- Peter S LaViolette (18100191)
- Peter V Gould (18100185)
- Philip D Tatman (18100194)
- Pieter Wesseling (15045153)
- Pieter Wesseling (385172)
- Pim J French (13609633)
- Pim J. French (15044277)
- Rameen Beroukhim (60593)
- Roel G.W. Verhaak (14873733)
- Roel G.W. Verhaak (15118913)
- Simona Cazacu (18100083)
- Simona Migliozzi (18100095)
- Simona Migliozzi (18100197)
- Simone P Niclou (9621985)
- Simone P. Niclou (14938466)
- Spyridon Bakas (18100074)
- Spyridon Bakas (8119364)
- Steven Kalkanis (18100200)
- Sun Ha Paek (18100104)
- Sun Ha Paek (7314266)
- Susan C Short (14566525)
- Tabatabai Ghazaleh (18100203)
- Tathiane M Malta (18100206)
- Tathiane M. Malta (18100056)
- Thais S Sabedot (18100209)
- Thais S. Sabedot (18100059)
- Tobias Walbert (15365026)
- Tobias Weiss (15048014)
- Tobias Weiss (2092234)
- Ujjwal Baid (8462214)
- W. K. Alfred Yung (14988015)
- Wies Vallentgoed (18100071)
- Wies Vallentgoed (6201461)
- Publication venue
- Publication date
- 04/03/2024
- Field of study
Table S3A/B/C/D: Clinical summary of GLASS epigenomic samples
S3A: Clinical summary of IDHmut patients who switched from GCIMP-high to GCIMP-low
S3B: Clinical summary of IDHmut and IDHwt patients with known hypermutator status
S3C: Clinical summary of IDHmut and IDHwt patients with known treatment information
S3D: Clinical summary of IDHmut patients with known treatment information</p
Table S6 from The Epigenetic Evolution of Glioma Is Determined by the <i>IDH1</i> Mutation Status and Treatment Regimen
- Author
- Adelheid Woehrer (285118)
- Allison K Lowman (18100119)
- Ana C deCarvalho (18100122)
- Ana C. deCarvalho (18100086)
- Ana Valeria Castro (18100125)
- Andrea Transou (18100128)
- Andrew R Brodbelt (14264588)
- Ann-Christin Hau (18100077)
- Ann-Christin Hau (18100131)
- Anna Golebiewska (733488)
- Anna Lasorella (15124960)
- Anna Lasorella (5555543)
- Annemiek Walenkamp (12893309)
- Annemiek Walenkamp (18100113)
- Annette M Molinaro (8571654)
- Antonio Iavarone (15124957)
- Antonio Iavarone (3814138)
- Azzam Ismail (3399350)
- Bart A Westerman (13421490)
- Bart A. Westerman (18100116)
- Bauke Ylstra (13241)
- Bauke Ylstra (15031418)
- Christoph Bock (29200)
- D. Ryan Ormond (18100101)
- D. Ryan Ormond (7908332)
- Daniel J Brat (13609624)
- Emre Kocakavuk (18100089)
- Emre Kocakavuk (18100134)
- Erwin G Van Meir (13609666)
- Erwin G. Van Meir (15010607)
- Floris P Barthel (18100137)
- Frederick S Varn (18100140)
- Frederick S. Varn (15017327)
- Fulvio D'Angelo (15124921)
- Fulvio D'Angelo (15168211)
- Gaetano Finocchiaro (109702)
- Ganesh Rao (795632)
- Gelareh Zadeh (160458)
- Guido Reifenberger (12335398)
- Guido Reifenberger (31600)
- Ho Keu ngNg (18100143)
- Hoon Kim (1964956)
- Houtan Noushmehr (14939975)
- Houtan Noushmehr (174733)
- Hrvoje Miletic (211715)
- Hui K Gan (9650552)
- Hui K. Gan (15011736)
- Indrani Datta (139666)
- Indrani Datta (18100065)
- Jack Rock (18100146)
- James M Snyder (18100149)
- Jason T Huse (18100152)
- Jennifer M Connelly (18100155)
- Jill S Barnholtz-Sloan (13609618)
- Jill S. Barnholtz-Sloan (14945857)
- Johanna M Niers (18100158)
- Johanna M. Niers (18100098)
- John F deGroot (18100161)
- Kadir C Akdemir (14318763)
- Kasthuri S Kannan (18100164)
- Keith L Ligon (9945582)
- Kenneth Aldape (11410196)
- Kenneth Aldape (9101353)
- Ketan R Bulsara (18100167)
- Kevin C Johnson (13352922)
- Kevin C. Johnson (18100080)
- Kristin D Alfaro (18100170)
- Laila M Poisson (13609654)
- Laila M. Poisson (10727128)
- Luciano Garofano (18100068)
- Luciano Garofano (18100173)
- Lucy F Stead (18100176)
- Lucy F. Stead (15084822)
- MacLean P Nasrallah (18100179)
- Marion Smits (18100110)
- Marion Smits (608568)
- Martin J van den Bent (18100182)
- Martin J. van den Bent (15011745)
- Mathilde C.M. Kouwenhoven (18100092)
- Mathilde CM Kouwenhoven (15783242)
- Michael Weller (15037908)
- Michael Weller (329740)
- Mohammad Hasanain (14835481)
- Mohammad Hasanain (15124915)
- Mustafa Khasraw (15036617)
- Mustafa Khasraw (6335354)
- Natalia S. Morosini (18100062)
- Peter A Sillevis Smitt (18100188)
- Peter A. Sillevis Smitt (18100107)
- Peter S LaViolette (18100191)
- Peter V Gould (18100185)
- Philip D Tatman (18100194)
- Pieter Wesseling (15045153)
- Pieter Wesseling (385172)
- Pim J French (13609633)
- Pim J. French (15044277)
- Rameen Beroukhim (60593)
- Roel G.W. Verhaak (14873733)
- Roel G.W. Verhaak (15118913)
- Simona Cazacu (18100083)
- Simona Migliozzi (18100095)
- Simona Migliozzi (18100197)
- Simone P Niclou (9621985)
- Simone P. Niclou (14938466)
- Spyridon Bakas (18100074)
- Spyridon Bakas (8119364)
- Steven Kalkanis (18100200)
- Sun Ha Paek (18100104)
- Sun Ha Paek (7314266)
- Susan C Short (14566525)
- Tabatabai Ghazaleh (18100203)
- Tathiane M Malta (18100206)
- Tathiane M. Malta (18100056)
- Thais S Sabedot (18100209)
- Thais S. Sabedot (18100059)
- Tobias Walbert (15365026)
- Tobias Weiss (15048014)
- Tobias Weiss (2092234)
- Ujjwal Baid (8462214)
- W. K. Alfred Yung (14988015)
- Wies Vallentgoed (18100071)
- Wies Vallentgoed (6201461)
- Publication venue
- Publication date
- 04/03/2024
- Field of study
Table S6: Deconvolution cell proportions and probe-signature matrix
S6A: Methylcibersort cell proportions
S6B: Methylcibersort cell reference mixture</p
Supplemental Figures Legends from The Epigenetic Evolution of Glioma Is Determined by the <i>IDH1</i> Mutation Status and Treatment Regimen
- Author
- Adelheid Woehrer (285118)
- Allison K Lowman (18100119)
- Ana C deCarvalho (18100122)
- Ana C. deCarvalho (18100086)
- Ana Valeria Castro (18100125)
- Andrea Transou (18100128)
- Andrew R Brodbelt (14264588)
- Ann-Christin Hau (18100077)
- Ann-Christin Hau (18100131)
- Anna Golebiewska (733488)
- Anna Lasorella (15124960)
- Anna Lasorella (5555543)
- Annemiek Walenkamp (12893309)
- Annemiek Walenkamp (18100113)
- Annette M Molinaro (8571654)
- Antonio Iavarone (15124957)
- Antonio Iavarone (3814138)
- Azzam Ismail (3399350)
- Bart A Westerman (13421490)
- Bart A. Westerman (18100116)
- Bauke Ylstra (13241)
- Bauke Ylstra (15031418)
- Christoph Bock (29200)
- D. Ryan Ormond (18100101)
- D. Ryan Ormond (7908332)
- Daniel J Brat (13609624)
- Emre Kocakavuk (18100089)
- Emre Kocakavuk (18100134)
- Erwin G Van Meir (13609666)
- Erwin G. Van Meir (15010607)
- Floris P Barthel (18100137)
- Frederick S Varn (18100140)
- Frederick S. Varn (15017327)
- Fulvio D'Angelo (15124921)
- Fulvio D'Angelo (15168211)
- Gaetano Finocchiaro (109702)
- Ganesh Rao (795632)
- Gelareh Zadeh (160458)
- Guido Reifenberger (12335398)
- Guido Reifenberger (31600)
- Ho Keu ngNg (18100143)
- Hoon Kim (1964956)
- Houtan Noushmehr (14939975)
- Houtan Noushmehr (174733)
- Hrvoje Miletic (211715)
- Hui K Gan (9650552)
- Hui K. Gan (15011736)
- Indrani Datta (139666)
- Indrani Datta (18100065)
- Jack Rock (18100146)
- James M Snyder (18100149)
- Jason T Huse (18100152)
- Jennifer M Connelly (18100155)
- Jill S Barnholtz-Sloan (13609618)
- Jill S. Barnholtz-Sloan (14945857)
- Johanna M Niers (18100158)
- Johanna M. Niers (18100098)
- John F deGroot (18100161)
- Kadir C Akdemir (14318763)
- Kasthuri S Kannan (18100164)
- Keith L Ligon (9945582)
- Kenneth Aldape (11410196)
- Kenneth Aldape (9101353)
- Ketan R Bulsara (18100167)
- Kevin C Johnson (13352922)
- Kevin C. Johnson (18100080)
- Kristin D Alfaro (18100170)
- Laila M Poisson (13609654)
- Laila M. Poisson (10727128)
- Luciano Garofano (18100068)
- Luciano Garofano (18100173)
- Lucy F Stead (18100176)
- Lucy F. Stead (15084822)
- MacLean P Nasrallah (18100179)
- Marion Smits (18100110)
- Marion Smits (608568)
- Martin J van den Bent (18100182)
- Martin J. van den Bent (15011745)
- Mathilde C.M. Kouwenhoven (18100092)
- Mathilde CM Kouwenhoven (15783242)
- Michael Weller (15037908)
- Michael Weller (329740)
- Mohammad Hasanain (14835481)
- Mohammad Hasanain (15124915)
- Mustafa Khasraw (15036617)
- Mustafa Khasraw (6335354)
- Natalia S. Morosini (18100062)
- Peter A Sillevis Smitt (18100188)
- Peter A. Sillevis Smitt (18100107)
- Peter S LaViolette (18100191)
- Peter V Gould (18100185)
- Philip D Tatman (18100194)
- Pieter Wesseling (15045153)
- Pieter Wesseling (385172)
- Pim J French (13609633)
- Pim J. French (15044277)
- Rameen Beroukhim (60593)
- Roel G.W. Verhaak (14873733)
- Roel G.W. Verhaak (15118913)
- Simona Cazacu (18100083)
- Simona Migliozzi (18100095)
- Simona Migliozzi (18100197)
- Simone P Niclou (9621985)
- Simone P. Niclou (14938466)
- Spyridon Bakas (18100074)
- Spyridon Bakas (8119364)
- Steven Kalkanis (18100200)
- Sun Ha Paek (18100104)
- Sun Ha Paek (7314266)
- Susan C Short (14566525)
- Tabatabai Ghazaleh (18100203)
- Tathiane M Malta (18100206)
- Tathiane M. Malta (18100056)
- Thais S Sabedot (18100209)
- Thais S. Sabedot (18100059)
- Tobias Walbert (15365026)
- Tobias Weiss (15048014)
- Tobias Weiss (2092234)
- Ujjwal Baid (8462214)
- W. K. Alfred Yung (14988015)
- Wies Vallentgoed (18100071)
- Wies Vallentgoed (6201461)
- Publication venue
- Publication date
- 04/03/2024
- Field of study
Supplemental Figures Legends</p