11 research outputs found
Reactivity Indexes of Fullerene and Bismullene Mixed Clusters: How the Intruders Modify the Properties
In this investigation, the feasibility
of functionalizing fullerene
and bismullene with Bi and C as intruders is theoretically explored.
The systems analyzed are C<sub>60ā<i>x</i></sub>Bi<sub><i>x</i></sub> (with x = 0ā10, fullerene-like) and
Bi<sub>60ā<i>y</i></sub>C<sub><i>y</i></sub> (with <i>y</i> = 0ā10, bismullene-like). Optimized
geometries, reactivity indexes, and highest occupied molecular orbital
to lowest unoccupied molecular orbital (HOMOāLUMO) gaps (for
analyzing the potential application of these molecules as materials
for solar cells) are reported. The most stable structures of bismullene-like
systems have cage geometries. The most stable fullerene-like geometries
resemble a cup with bismuth atoms at the edge of the bowl. The presence
of intruders increases the electron acceptor power and decreases the
electron donor power in most cases. HOMOāLUMO gaps indicate
that bismullene-like clusters represent better candidates for building
solar cells than fullerene-like clusters. This information could be
useful for future experiments
Is Silybin the Best Free Radical Scavenger Compound in Silymarin?
Silymarin
is a natural mixture with beneficial properties for health, specifically
due to its antiradical characteristics. The major components of this
mixture are silybin (SIL), silychristin (SILYC), isosilybin (ISOSIL),
silydianin (SILYD), and taxifolin (TAX). In this report, the electronic
properties of these substances are investigated using density functional
theory calculations, mainly in order to fully understand the free
radical scavenger properties of these compounds. Optimized geometries
and Raman spectra are reported. These results could be experimentally
useful for identifying some of the major components of the mixture.
The relative abundance of deprotonated species under physiological
conditions is also included. The free radical scavenger capacity is
studied in relation to three mechanisms: the single electron transfer
(SET), the radical adduct formation (RAF), and the hydrogen atom transfer
(HAT). According to this investigation, the HAT mechanism is the most
efficient mechanism for scavenging free radicals for these compounds
followed by the RAF mechanism where intramolecular hydrogen bonds
are formed in order to stabilize the <sup>ā¢</sup>OOH free radical.
A particularly important factor is that none of the compounds being
studied showed an outstanding antiradical capacity performance compared
to the others. In this sense, silymarin is an interesting mixture
with antiradical properties and we now know that one single component
should be as effective as the mixture
Silybin and 2,3-Dehydrosilybin Flavonolignans as Free Radical Scavengers
The electronic properties of six
derivatives of silybin (characterized
by the absence of the 2,3 double bond) and six derivatives of 2,3-dehydrosilybin
(characterized by the presence of the 2,3 double bond) have been studied
by applying density functional theory to fully understand the free
radical scavengerās mechanism for action and the relationship
between reactivity and chemical structure. Optimized geometries, Raman
spectra, and Ī»<sub>max</sub> values are reported, enabling us
to characterize the systems. These spectra may be useful for monitoring
the oxidation between silybin and 2,3-dehydrosilybin, thus providing
important experimental information. The relative abundance of deprotonated
species under physiological conditions is also reported. Under physiological
conditions (pH 7.4), ā¼70% of silybin is protonated, but 60%
of 2,3-dehydrosilybin is deprotonated. The free radical scavenger
capacity is analyzed in terms of two mechanisms: electron transfer
and adduct formation. Deprotonated molecules are better electron donors
and worse electron acceptors than non-deprotonated species. The conclusions
derived from this investigation completely concur with previous experimental
results. The free radical scavenging activity of 2,3-dehydrosilybin
derivatives is higher than that for silybin derivatives. What was
not previously considered was the importance of the deprotonated species,
which is remarkable and may be important for future experiments
Carbohydrates and Their Free Radical Scavenging Capability: A Theoretical Study
A density functional theory (DFT) study on the free radical
(OH<sup>ā¢</sup> and OOH<sup>ā¢</sup>) scavenging properties
of some mono- and polysaccharides is presented. Two mechanisms, single
electron transfer (SET) and hydrogen atom transfer (HAT), are considered.
The former mechanism is studied by making use of the vertical ionization
energy and vertical electron affinity of the radicals and carbohydrates.
It is confirmed that the SET mechanism is not plausible to occur.
With respect to the HAT, not only does the OH<sup>ā¢</sup> radical
react preferably with one hydrogen atom bonded to one carbon atom,
but also the reaction with a hydrogen atom bonded to an oxygen is
possible. Finally, it is suggested that the carbohydrates are not
able to directly scavenge OOH<sup>ā¢</sup>
<i>Cis</i> Carotenoids: Colorful Molecules and Free Radical Quenchers
We present a density functional theory
(DFT) and time-dependent
density functional theory (TD-DFT) study on the stability, antioxidant
properties with respect to the single electron transfer mechanism,
and electronic absorption spectra of some isomers (9-<i>cis</i>, 13-<i>cis</i>, and 15-<i>cis</i>) of carotenoids
such as astaxanthin, lycopene, and those present in virgin olive oil
(lutein, Ī²-carotene, neoxanthin, antheraxanthin, violaxanthin,
neochrome, luteoxanthin, mutatoxanthin, and violaxanthin). In general,
the calculated relative stability of the <i>cis</i> isomers
appears to be in line with experimental observations. It is predicted
that the above-mentioned carotenoids (<i>cis</i> and <i>trans</i> isomers) will transfer one electron to the <sup>ā¢</sup>OH radical. However, this transference is not plausible with radicals
such as <sup>ā¢</sup>OOH, <sup>ā¢</sup>OC<sub>2</sub>H<sub>5</sub>, <sup>ā¢</sup>OOC<sub>2</sub>H<sub>5</sub>, <sup>ā¢</sup>NO<sub>2</sub>, and <sup>ā¢</sup>OOCH<sub>2</sub>CHī»CH<sub>2</sub>. On the other hand, some carotenoids (Ī²-carotene, lycopene,
lutein, astaxanthin, violaxanthin, and antheraxanthin) will likely
accept, in a medium of low polarity, one electron from the radical <sup>ā¢</sup>O<sub>2</sub><sup>ā</sup>. However, neoxanthin,
auroxanthin, mutatoxanthin, luteoxanthin, and neochrome would not
participate in such an electronic transfer mechanism. The TD-DFT studies
show that neutral species of the <i>cis</i> and <i>trans</i> isomers maintain the same color. On the contrary,
the ionic species undergo a ābleachingā process where
the absorption wavelengths shift to longer values (>700 nm). Additionally,
the formation of a complex between astaxanthin and Cu<sup>2+</sup> is explored as well as the effect that the metal atom will have
in the UVāvis spectrum
New Free Radicals to Measure Antiradical Capacity: A Theoretical Study
A new family of free radicals, that
are soluble in water and stable
at all pH values, were recently synthesized and used to assess the
antiradical capacity of several polyphenols. In the present work,
density functional calculations were used to investigate the single
electron transfer reactions between these new free radicals and polyphenols
in aqueous solution. The quantification of the antiradical capacity
is a challenge, particularly for polyphenols, since they become unstable
under experimental conditions. It was found that the electron transfer
from polyphenols to the newly developed free radicals can be used
to assess the efficiency of this kind of compound for preventing oxidative
stress. Since one of the free radicals can be deprotonated under experimental
conditions, this newly synthesized radical can help distinguish more
clearly between different antiradical compounds with similar antioxidant
capacity by modifying the pH in the experiments. The results reported
here are in good agreement with the available experimental data and
allowed making recommendations about possible experimental conditions
in the design of antioxidant assays using the investigated radicals
Which Is The Best Sandwich Compound? Hexaphenylbenzene Substituted By Sandwich Compounds Bearing Sc, Cr, and Fe
The electronic properties of nine
different hexaarylbenzene molecules
substituted by sandwich compounds have been studied by applying density
functional theory. Different structures and the particular electron
donor power of these systems have been considered in order to analyze
their oxidant capacity, using bisĀ(ciclopentadienyl) scandium, ferrocene,
and bisĀ(benzene)chromium as sandwich compounds. Both monometallic
and bimetallic combinations are investigated. According to the ionization
energies and electron affinities, compounds with Cr are nucleophiles
and represent the best electron donors, whereas compounds with Sc
are electrophiles and represent the best electron acceptors. The worse
electron donor or acceptor is hexakisĀ(4-ferrocenyl phenyl) benzene.
This is very significant, as it implies that the very well-known electronic
properties of hexakisĀ(4-ferrocenyl phenyl) benzene can be improved
by substituting with other metals, such as Sc and Cr. This suggests
several possible applications for these compounds
Theoretical Study of Novel Azo-Tetraphenylporphyrins: Potential Photovoltaic Materials
A density functional theory study
was performed to analyze the electron donorāacceptor properties
of the cis and trans isomers of a novel azobenzene-containing tetraphenylporphyrin
(TPPN<sub>2</sub>PhC<sub>14</sub>H<sub>29</sub>) with different substituents
(Br or TMS). In general, the trans isomers are better electron acceptors
than the correspondent cis homologues. Their UVāvis spectra
were also obtained and a comparison with available experimental results
is included. According to these results, the azo compounds reported
here are promising materials for the elaboration of dye-sensitized
solar cells because their HOMOāLUMO gaps are close to 2 eV.
Moreover, the energy of the high intensity absorption bands also fulfills
the requirements needed for the operation of a solar cell built with
TiO<sub>2</sub> and the I<sup>ā</sup>/I<sub>3</sub><sup>ā</sup> pair
Dinuclear Copper Complexes with Imidazole Derivative Ligands: A Theoretical Study Related to Catechol Oxidase Activity
Catechol oxidase is a very important and interesting
metalloprotein.
In spite of the efforts to understand the reaction mechanism of this
protein, there are important questions that remain unanswered concerning
the catalytic mechanism of this enzyme. In this article, dinuclear
copper compounds are used as biomimetic models of catechol oxidase
to study plausible reaction paths. These dinuclear copperĀ(II) complexes
have distant metal centers (of 7.5 Ć
approximately) and superior
catalytic activity to that of many dicopper complexes with shorter
CuāCu distances. One mononuclear copperĀ(II) complex is also
analyzed in this investigation in order to see the influence of the
two metal centers in the catalytic activity. Density functional theory
calculations were performed to obtain optimized structures, vertical
ionization energies, vertical electron affinities, the electrodonating
power (Ļ<sup>ā</sup>), the electroaccepting power (Ļ<sup>+</sup>) and the energy difference of several reaction paths. The <i>K</i><sub>M</sub> experimental results that were previously
reported compare well with the electroaccepting power (Ļ<sup>+</sup>) of the copper compounds that are included in this article,
indicating that this index is useful for the interpretation of the
electron transfer capacity and therefore the catalytic activity. The
catechol moiety coordinates to only one Cu ion, but two metal atoms
are needed in order to have a good electron acceptor capacity of the
biomimetic models
Development of BloodāBrain Barrier Permeable Nitrocatechol-Based Catechol <i>O</i>āMethyltransferase Inhibitors with Reduced Potential for Hepatotoxicity
Recent efforts have been focused
on the development of centrally
active COMT inhibitors, which can be valuable assets for neurological
disorders such as Parkinsonās disease, due to the severe hepatotoxicity
risk associated with tolcapone. New nitrocatechol COMT inhibitors
based on naturally occurring caffeic acid and caffeic acid phenethyl
ester were developed. All nitrocatechol derivatives displayed potent
inhibition of peripheral and cerebral COMT within the nanomolar range.
Druglike derivatives <b>13</b>, <b>15</b>, and <b>16</b> were predicted to cross the bloodābrain barrier in vitro and were significantly less toxic than tolcapone and entacapone when
incubated at 50 Ī¼M with rat primary hepatocytes. Moreover, their
unique acidity and electrochemical properties decreased the chances
of formation of reactive quinone-imines and, as such, the potential
for hepatotoxicity. The binding mode of <b>16</b> confirmed
that the major interactions with COMT were established via the nitrocatechol
ring, allowing derivatization of the side chain for future lead optimization
efforts