Rapid antigen test in diagnosis of SARS-COV-2 in a specialized care facility Urology and Nephrology center –Mansoura University

Background:  Polymerase chain reaction (PCR) is the benchmark in diagnosing of corona virus disease. It takes at least 4 hours. Multiple studies reported that rapid antigen test could be used. Their role in diagnosing corona virus disease 2019 (COVID-19) is questionable. This study was conducted to assess the accuracy of rapid antigen test in Urology and Nephrology Center Mansoura University, Egypt. Methods: COVID-19 rapid ag test was evaluated in comparison to real time PCR as a gold standard in diagnosis of COVID-19 infection in employees and patients with respiratory symptoms in specialized care facility Urology and Nephrology Center of Mansoura University from March2020 till August 2021. Complete blood picture and non-contrast computerized tomography (CT) was done. Results: Eight hundred and eighty-four (884) individuals (median age 36 years) were included in this study: 478 healthcare workers, 217 non-healthcare workers, and 189 patients. PCR was positive in 569 samples and negative in 315. Out of 315 negative PCR samples, 8 were positive by rapid antigen test with a specificity of 97.4%. Conclusion: Rapid antigen tests in comparison to PCR test have a good accuracy in diagnosis in of COVID-19 infection and can be used during pandemics in low-resource areas

The TM6SF2 variant as a risk factor for hepatocellular carcinoma development in chronic liver disease patients.

IntroductionHepatocellular carcinoma (HCC) is one of the most prevalent cancers worldwide. A non-synonymous single nucleotide polymorphism (SNP) of the transmembrane 6 superfamily member 2 (TM6SF2) gene is associated with non-alcoholic fatty liver disease. SNPs of the TM6SF2 gene play an important role in the pathogenesis of HCC in alcoholic cirrhosis, but there are limited data regarding other possible etiologies. We aimed to evaluate the role of the rs58542926 polymorphism in the development of HCC in Egyptian chronic liver disease (CLD) patients.Material and methodsA total of 120 participants, including 40 HCC patients, 40 CLD patients, and 40 healthy controls, were selected. Real-time polymerase chain reaction (RT-PCR) was used to detect the TM6SF2 rs58542926 polymorphism.ResultsThere were no significant differences among the three studied groups regarding age (p = 0.06) and gender (p = 0.75). Frequencies of the CT, TT, CT + TT genotypes and the T allele were significantly higher in HCC patients than in the CLD and control groups (p p = 0.005, and p ConclusionsThe TM6SF2 rs58542926 genotype is associated with an increased risk of HCC in the Egyptian population