Improving the prediction of glassy dynamics by pinpointing the local cage

The relationship between structure and dynamics in glassy fluids remains an intriguing open question. Recent work has shown impressive advances in our ability to predict local dynamics using structural features, most notably due to the use of advanced machine learning techniques. Here we explore whether a simple linear regression algorithm combined with intelligently chosen structural order parameters can reach the accuracy of the current, most advanced machine learning approaches for predicting dynamic propensity. To do this we introduce a method to pinpoint the cage state of the initial configuration -- i.e. the configuration consisting of the average particle positions when particle rearrangement is forbidden. We find that, in comparison to both the initial state and the inherent state, the structure of the cage state is highly predictive of the long-time dynamics of the system. Moreover, by combining the cage state information with the initial state, we are able to predict dynamic propensities with unprecedentedly high accuracy over a broad regime of time scales, including the caging regime

Point Defects in Crystals of Charged Colloids

Charged colloidal particles - both on the nano and micron scales - have been instrumental in enhancing our understanding of both atomic and colloidal crystals. These systems can be straightforwardly realized in the lab, and tuned to self-assemble into body-centered cubic (BCC) and face-centered cubic (FCC) crystals. While these crystals will always exhibit a finite number of point defects, including vacancies and interstitials - which can dramatically impact their material properties - their existence is usually ignored in scientific studies. Here, we use computer simulations and free-energy calculations to characterize vacancies and interstitials in both FCC and BCC crystals of point-Yukawa particles. We show that, in the BCC phase, defects are surprisingly more common than in the FCC phase, and the interstitials manifest as so-called crowdions: an exotic one-dimensional defect proposed to exist in atomic BCC crystals. Our results open the door to directly observing these elusive defects in the lab.Comment: 8 pages, 4 figure

Roadmap on machine learning glassy liquids

Unraveling the connections between microscopic structure, emergent physical properties, and slow dynamics has long been a challenge in the field of the glass transition. The absence of clear visible structural order in amorphous configurations complicates the identification of the key features related to structural relaxation and transport properties. The difficulty in sampling equilibrated configurations at low temperatures hampers thorough numerical and theoretical investigations. This roadmap article explores the potential of machine learning (ML) techniques to face these challenges, building on the algorithms that have revolutionized computer vision and image recognition. We present successful ML applications, as well as many open problems for the future, such as transferability and interpretability of ML approaches. We highlight new ideas and directions in which ML could provide breakthroughs to better understand glassy liquids. To foster a collaborative community effort, the article introduces the "GlassBench" dataset, providing simulation data and benchmarks for both two-dimensional and three-dimensional glass-formers. Emphasizing the importance of benchmarks, we identify critical metrics for comparing the performance of emerging ML methodologies, in line with benchmarking practices in image and text recognition. The goal of this roadmap is to provide guidelines for the development of ML techniques in systems displaying slow dynamics, while inspiring new directions to improve our understanding of glassy liquids

Comparing machine learning techniques for predicting glassy dynamics

In the quest to understand how structure and dynamics are connected in glasses, a number of machine learning based methods have been developed that predict dynamics in supercooled liquids. These methods include both increasingly complex machine learning techniques and increasingly sophisticated descriptors used to describe the environment around particles. In many cases, both the chosen machine learning technique and choice of structural descriptors are varied simultaneously, making it hard to quantitatively compare the performance of different machine learning approaches. Here, we use three different machine learning algorithms - linear regression, neural networks, and graph neural networks - to predict the dynamic propensity of a glassy binary hard-sphere mixture using as structural input a recursive set of order parameters recently introduced by Boattini et al. [Phys. Rev. Lett. 127, 088007 (2021)]. As we show, when these advanced descriptors are used, all three methods predict the dynamics with nearly equal accuracy. However, the linear regression is orders of magnitude faster to train, making it by far the method of choice

Comparing machine learning techniques for predicting glassy dynamics

In the quest to understand how structure and dynamics are connected in glasses, a number of machine learning based methods have been developed that predict dynamics in supercooled liquids. These methods include both increasingly complex machine learning techniques, and increasingly sophisticated descriptors used to describe the environment around particles. In many cases, both the chosen machine learning technique and choice of structural descriptors are varied simultaneously, making it hard to quantitatively compare the performance of different machine learning approaches. Here, we use three different machine learning algorithms -- linear regression, neural networks, and GNNs -- to predict the dynamic propensity of a glassy binary hard-sphere mixture using as structural input a recursive set of order parameters recently introduced by Boattini et al. [Phys. Rev. Lett. 127, 088007 (2021)]. As we show, when these advanced descriptors are used, all three methods predict the dynamics with nearly equal accuracy. However, the linear regression is orders of magnitude faster to train making it by far the method of choice

Comparing machine learning techniques for predicting glassy dynamics

In the quest to understand how structure and dynamics are connected in glasses, a number of machine learning based methods have been developed that predict dynamics in supercooled liquids. These methods include both increasingly complex machine learning techniques and increasingly sophisticated descriptors used to describe the environment around particles. In many cases, both the chosen machine learning technique and choice of structural descriptors are varied simultaneously, making it hard to quantitatively compare the performance of different machine learning approaches. Here, we use three different machine learning algorithms - linear regression, neural networks, and graph neural networks - to predict the dynamic propensity of a glassy binary hard-sphere mixture using as structural input a recursive set of order parameters recently introduced by Boattini et al. [Phys. Rev. Lett. 127, 088007 (2021)]. As we show, when these advanced descriptors are used, all three methods predict the dynamics with nearly equal accuracy. However, the linear regression is orders of magnitude faster to train, making it by far the method of choice

Point defects in crystals of charged colloids

Charged colloidal particles—on both the nano and micron scales—have been instrumental in enhancing our understanding of both atomic and colloidal crystals. These systems can be straightforwardly realized in the lab and tuned to self-assemble into body-centered-cubic (BCC) and face-centered-cubic (FCC) crystals. While these crystals will always exhibit a finite number of point defects, including vacancies and interstitials—which can dramatically impact their material properties—their existence is usually ignored in scientific studies. Here, we use computer simulations and free-energy calculations to characterize vacancies and interstitials in FCC and BCC crystals of point-Yukawa particles. We show that, in the BCC phase, defects are surprisingly more common than in the FCC phase, and the interstitials manifest as so-called crowdions: an exotic one-dimensional defect proposed to exist in atomic BCC crystals. Our results open the door to directly observe these elusive defects in the lab

Roadmap on machine learning glassy liquids

International audienceUnraveling the connections between microscopic structure, emergent physical properties, and slow dynamics has long been a challenge in the field of the glass transition. The absence of clear visible structural order in amorphous configurations complicates the identification of the key features related to structural relaxation and transport properties. The difficulty in sampling equilibrated configurations at low temperatures hampers thorough numerical and theoretical investigations. This roadmap article explores the potential of machine learning (ML) techniques to face these challenges, building on the algorithms that have revolutionized computer vision and image recognition. We present successful ML applications, as well as many open problems for the future, such as transferability and interpretability of ML approaches. We highlight new ideas and directions in which ML could provide breakthroughs to better understand glassy liquids. To foster a collaborative community effort, the article introduces the "GlassBench" dataset, providing simulation data and benchmarks for both two-dimensional and three-dimensional glass-formers. Emphasizing the importance of benchmarks, we identify critical metrics for comparing the performance of emerging ML methodologies, in line with benchmarking practices in image and text recognition. The goal of this roadmap is to provide guidelines for the development of ML techniques in systems displaying slow dynamics, while inspiring new directions to improve our understanding of glassy liquids

Roadmap on machine learning glassy liquids

International audienceUnraveling the connections between microscopic structure, emergent physical properties, and slow dynamics has long been a challenge in the field of the glass transition. The absence of clear visible structural order in amorphous configurations complicates the identification of the key features related to structural relaxation and transport properties. The difficulty in sampling equilibrated configurations at low temperatures hampers thorough numerical and theoretical investigations. This roadmap article explores the potential of machine learning (ML) techniques to face these challenges, building on the algorithms that have revolutionized computer vision and image recognition. We present successful ML applications, as well as many open problems for the future, such as transferability and interpretability of ML approaches. We highlight new ideas and directions in which ML could provide breakthroughs to better understand glassy liquids. To foster a collaborative community effort, the article introduces the "GlassBench" dataset, providing simulation data and benchmarks for both two-dimensional and three-dimensional glass-formers. Emphasizing the importance of benchmarks, we identify critical metrics for comparing the performance of emerging ML methodologies, in line with benchmarking practices in image and text recognition. The goal of this roadmap is to provide guidelines for the development of ML techniques in systems displaying slow dynamics, while inspiring new directions to improve our understanding of glassy liquids