Kin-Aggregations Explain Chaotic Genetic Patchiness, a Commonly Observed Genetic Pattern, in a Marine Fish - Fig 3

<p>Mean pairwise relatedness () values by geographic sample (A) and cluster (B) with standard errors. The shaded region indicates the area within the 95% confidence intervals calculated using a permutation test with 1,000 iterations. Triangles in 3B indicate proportion of full and half-sibs within the cluster with shaded symbols indicating significantly elevated transitivity when compared to randomly generated networks equivalent to those observed in the clusters.</p

Regression plot showing locus specific sample proportion of individuals which failed to amplify plotted against the absolute value of the difference between expected and observed heterozygosity.

<p>The plotted line is the result of a linear regression (F_(1,88) = 0.0018, p = 0.97) with the shaded area indicating the 95% confidence intervals. Blue points are locus by sample combinations which were not significantly different from the expectations of HWE based on exact tests. Red points are locus by sample combinations which are significantly deviated from the expectations of HWE based on exact tests.</p

The Mesoamerican Barrier Reef study sites: BC–Banco Chinchorro, Mexico; BBR–Belizean barrier reef, Belize; TA–Turneffe Atoll, Belize; RO–Roatán, Honduras.

<p>Insets show scatter plots (and density plots in the case of two clusters) of clusters from DAPC analysis within sampling locations. The axes of the plots are the first two discriminant functions used to delineate clusters with inertia ellipses representing 67% of the variance. The end of the lines connected to the centre of each inertia ellipse represent individuals plotted on each discriminant function and denotes cluster membership. In locations with only two clusters present there is only one discriminant function, as such density plots of proportion of individuals present at each value of the discriminant function were included to show cluster separation. Numbers in parentheses indicate how many individuals were collected from each location.</p

Relatedness and sibship summary of genetic clusters within sample sites.

<p>Relatedness and sibship summary of genetic clusters within sample sites.</p

PCR Conditions and locus summary statistics.

<p>PCR Conditions and locus summary statistics.</p