25 research outputs found
Self-Replicating Twins in Nanowires
Based
on molecular-dynamics simulations validated with quantum-mechanical
calculations, we predict that (111) twin planes in a [111]-oriented
GaAs nanowire attain attractive interactions mediated by surface strain.
This gives rise to a self-replication mechanism that continuously
generates a twin superlattice in a nanowire during growth. We demonstrate
significant implications of the twin–twin interaction for the
electronic, mechanical, and chemical properties of nanowires. These
unique properties suggest potential applications such as catalysts
for solar fuel production and nanoscale mechanical dampers
Decaheme Cytochrome MtrF Adsorption and Electron Transfer on Gold Surface
Emergent electrical properties of
multiheme cytochromes have promising
applications. We performed hybrid simulations (molecular dynamics,
free energy computation, and kinetic Monte Carlo) to study decaheme
cytochrome, MtrF adsorption on an Au (111) surface in water and the
electron transfer (ET) efficiency. Our results reveal that the gold
surface’s dehydration serves as a crucial driving force for
protein adsorption due to large surface tension. The most possible
adsorption orientation is with the ET terminal (heme5) approaching
the gold surface, which yields a pathway for ET between the substrate
and the aqueous environment. Upon adsorption, protein’s secondary
structures and central domains (II and IV) bonded with heme-residues
remain relatively stable. MtrF surface mobility is dictated by thiol-gold
interaction and strong binding between Au(111) and peptide aromatic
groups. ET transfer rate across protein heme-network along the solvent-to-surface
direction is slightly larger than that of the reverse direction, but
lower than that of the solvation structure
Faceting, Grain Growth, and Crack Healing in Alumina
Reactive molecular dynamics simulations
are performed to study
self-healing of cracks in Al<sub>2</sub>O<sub>3</sub> containing core/shell
SiC/SiO<sub>2</sub> nanoparticles. These simulations are carried out
in a precracked Al<sub>2</sub>O<sub>3</sub> under mode 1 strain at
1426 °C. The nanoparticles are embedded ahead of the precrack
in the Al<sub>2</sub>O<sub>3</sub> matrix. When the crack begins to
propagate at a strain of 2%, the nanoparticles closest to the advancing
crack distort to create nanochannels through which silica flows toward
the crack and stops its growth. At this strain, the Al<sub>2</sub>O<sub>3</sub> matrix at the interface of SiC/SiO<sub>2</sub> nanoparticles
forms facets along the prismatic (A) ⟨2̅110⟩ and
prismatic (M) ⟨1̅010⟩ planes. These facets act
as nucleation sites for the growth of multiple secondary amorphous
grains in the Al<sub>2</sub>O<sub>3</sub> matrix. These grains grow
with an increase in the applied strain. Voids and nanocracks form
in the grain boundaries but are again healed by diffusion of silica
from the nanoparticles
Faceting, Grain Growth, and Crack Healing in Alumina
Reactive molecular dynamics simulations
are performed to study
self-healing of cracks in Al<sub>2</sub>O<sub>3</sub> containing core/shell
SiC/SiO<sub>2</sub> nanoparticles. These simulations are carried out
in a precracked Al<sub>2</sub>O<sub>3</sub> under mode 1 strain at
1426 °C. The nanoparticles are embedded ahead of the precrack
in the Al<sub>2</sub>O<sub>3</sub> matrix. When the crack begins to
propagate at a strain of 2%, the nanoparticles closest to the advancing
crack distort to create nanochannels through which silica flows toward
the crack and stops its growth. At this strain, the Al<sub>2</sub>O<sub>3</sub> matrix at the interface of SiC/SiO<sub>2</sub> nanoparticles
forms facets along the prismatic (A) ⟨2̅110⟩ and
prismatic (M) ⟨1̅010⟩ planes. These facets act
as nucleation sites for the growth of multiple secondary amorphous
grains in the Al<sub>2</sub>O<sub>3</sub> matrix. These grains grow
with an increase in the applied strain. Voids and nanocracks form
in the grain boundaries but are again healed by diffusion of silica
from the nanoparticles
Faceting, Grain Growth, and Crack Healing in Alumina
Reactive molecular dynamics simulations
are performed to study
self-healing of cracks in Al<sub>2</sub>O<sub>3</sub> containing core/shell
SiC/SiO<sub>2</sub> nanoparticles. These simulations are carried out
in a precracked Al<sub>2</sub>O<sub>3</sub> under mode 1 strain at
1426 °C. The nanoparticles are embedded ahead of the precrack
in the Al<sub>2</sub>O<sub>3</sub> matrix. When the crack begins to
propagate at a strain of 2%, the nanoparticles closest to the advancing
crack distort to create nanochannels through which silica flows toward
the crack and stops its growth. At this strain, the Al<sub>2</sub>O<sub>3</sub> matrix at the interface of SiC/SiO<sub>2</sub> nanoparticles
forms facets along the prismatic (A) ⟨2̅110⟩ and
prismatic (M) ⟨1̅010⟩ planes. These facets act
as nucleation sites for the growth of multiple secondary amorphous
grains in the Al<sub>2</sub>O<sub>3</sub> matrix. These grains grow
with an increase in the applied strain. Voids and nanocracks form
in the grain boundaries but are again healed by diffusion of silica
from the nanoparticles
Faceting, Grain Growth, and Crack Healing in Alumina
Reactive molecular dynamics simulations
are performed to study
self-healing of cracks in Al<sub>2</sub>O<sub>3</sub> containing core/shell
SiC/SiO<sub>2</sub> nanoparticles. These simulations are carried out
in a precracked Al<sub>2</sub>O<sub>3</sub> under mode 1 strain at
1426 °C. The nanoparticles are embedded ahead of the precrack
in the Al<sub>2</sub>O<sub>3</sub> matrix. When the crack begins to
propagate at a strain of 2%, the nanoparticles closest to the advancing
crack distort to create nanochannels through which silica flows toward
the crack and stops its growth. At this strain, the Al<sub>2</sub>O<sub>3</sub> matrix at the interface of SiC/SiO<sub>2</sub> nanoparticles
forms facets along the prismatic (A) ⟨2̅110⟩ and
prismatic (M) ⟨1̅010⟩ planes. These facets act
as nucleation sites for the growth of multiple secondary amorphous
grains in the Al<sub>2</sub>O<sub>3</sub> matrix. These grains grow
with an increase in the applied strain. Voids and nanocracks form
in the grain boundaries but are again healed by diffusion of silica
from the nanoparticles
Pressure-Controlled Layer-by-Layer to Continuous Oxidation of ZrS<sub>2</sub>(001) Surface
Understanding oxidation mechanisms of layered semiconducting
transition-metal
dichalcogenides (TMDC) is important not only for controlling native
oxide formation but also for synthesis of oxide and oxysulfide products.
Here, reactive molecular dynamics simulations show that oxygen partial
pressure controls not only the ZrS2 oxidation rate but
also the oxide morphology and quality. We find a transition from layer-by-layer
oxidation to amorphous-oxide-mediated continuous oxidation as the
oxidation progresses, where different pressures selectively expose
different oxidation stages within a given time window. While the kinetics
of the fast continuous oxidation stage is well described by the conventional
Deal–Grove model, the layer-by-layer oxidation stage is dictated
by reactive bond-switching mechanisms. This work provides atomistic
details and a potential foundation for rational pressure-controlled
oxidation of TMDC materials
Pressure-Controlled Layer-by-Layer to Continuous Oxidation of ZrS<sub>2</sub>(001) Surface
Understanding oxidation mechanisms of layered semiconducting
transition-metal
dichalcogenides (TMDC) is important not only for controlling native
oxide formation but also for synthesis of oxide and oxysulfide products.
Here, reactive molecular dynamics simulations show that oxygen partial
pressure controls not only the ZrS2 oxidation rate but
also the oxide morphology and quality. We find a transition from layer-by-layer
oxidation to amorphous-oxide-mediated continuous oxidation as the
oxidation progresses, where different pressures selectively expose
different oxidation stages within a given time window. While the kinetics
of the fast continuous oxidation stage is well described by the conventional
Deal–Grove model, the layer-by-layer oxidation stage is dictated
by reactive bond-switching mechanisms. This work provides atomistic
details and a potential foundation for rational pressure-controlled
oxidation of TMDC materials
Pressure-Controlled Layer-by-Layer to Continuous Oxidation of ZrS<sub>2</sub>(001) Surface
Understanding oxidation mechanisms of layered semiconducting
transition-metal
dichalcogenides (TMDC) is important not only for controlling native
oxide formation but also for synthesis of oxide and oxysulfide products.
Here, reactive molecular dynamics simulations show that oxygen partial
pressure controls not only the ZrS2 oxidation rate but
also the oxide morphology and quality. We find a transition from layer-by-layer
oxidation to amorphous-oxide-mediated continuous oxidation as the
oxidation progresses, where different pressures selectively expose
different oxidation stages within a given time window. While the kinetics
of the fast continuous oxidation stage is well described by the conventional
Deal–Grove model, the layer-by-layer oxidation stage is dictated
by reactive bond-switching mechanisms. This work provides atomistic
details and a potential foundation for rational pressure-controlled
oxidation of TMDC materials
Pressure-Controlled Layer-by-Layer to Continuous Oxidation of ZrS<sub>2</sub>(001) Surface
Understanding oxidation mechanisms of layered semiconducting
transition-metal
dichalcogenides (TMDC) is important not only for controlling native
oxide formation but also for synthesis of oxide and oxysulfide products.
Here, reactive molecular dynamics simulations show that oxygen partial
pressure controls not only the ZrS2 oxidation rate but
also the oxide morphology and quality. We find a transition from layer-by-layer
oxidation to amorphous-oxide-mediated continuous oxidation as the
oxidation progresses, where different pressures selectively expose
different oxidation stages within a given time window. While the kinetics
of the fast continuous oxidation stage is well described by the conventional
Deal–Grove model, the layer-by-layer oxidation stage is dictated
by reactive bond-switching mechanisms. This work provides atomistic
details and a potential foundation for rational pressure-controlled
oxidation of TMDC materials