19 research outputs found
Gene ontology (GO) terms annotation of five motifs in AtAnn, SpAnn and EsAnn proteins Identified by MEME tools.
(XLSX)</p
RNA-seq data of expression levels of <i>E</i>. <i>salsugineum Anns</i> under salt stress treatments.
(XLSX)</p
MSA of Ann deduced amino acid obtained by ClustalW in <i>A</i>. <i>thaliana</i>, <i>S</i>. <i>parvula</i> and <i>E</i>. <i>salsugineum</i>.
Sequence shading: similarity across groups: blue box; similarity in a group: red box and red character; strict identity: red box and white character. Features: GXGT-38-D/E Ca2+-binding sites: purple arrows; conserved tryptophan required for membrane binding: blue circle; His40 key peroxidase residue: green triangle; DXXG putative GTP-binding motif: yellow stars; IRI actin binding motif: blue squares.</p
RNA-seq results comparing expression strengths of homologs between <i>S</i>. <i>parvula</i> (Sp) and <i>A</i>. <i>thaliana</i> (At).
(XLSX)</p
Phylogenetic analysis of SpAnn and EsAnn sequences.
The six groupings are represented by the roman letters.</p
Gene structure of <i>Ann</i> genes in <i>A</i>. <i>thaliana</i>, <i>S</i>. <i>parvula</i> and <i>E</i>. <i>salsugineum</i>.
Gene structure of Ann genes in A. thaliana, S. parvula and E. salsugineum.</p
List of <i>Ann</i> genes identified in <i>A</i>. <i>thaliana</i>, <i>S</i>. <i>parvula</i> and <i>E</i>. <i>salsugineum</i>.
List of Ann genes identified in A. thaliana, S. parvula and E. salsugineum.</p
Heatmap presenting expression profile of <i>SpAnn1</i>, <i>2</i> and <i>6</i> in root of <i>S</i>. <i>parvula</i> under salt stress at 3h, 24h and 48h.
(TIF)</p
The identified cis-acting elements in <i>Ann</i> gene family promoters in <i>A</i>. <i>thaliana</i>, <i>E</i>. <i>salsugineum</i> and <i>S</i>. <i>parvula</i>.
The identified cis-acting elements in Ann gene family promoters in A. thaliana, E. salsugineum and S. parvula.</p
Expression pattern of <i>E</i>. <i>salsugineum Anns</i> under salt stress treatments.
The gradient bar indicates the expression value of log2FC. Thirty days after germination, E. salsugineum seedlings were treated with 300 mM NaCl and after 24 h, leaves and roots were separately collected.</p