Generation of a fusion protein containing the two functional coiled-coil domain of t- SNARE, SNAP-23 and a transmembrane domain for mast cell

SNAREs (Soluble N-Ethylmaleimide-Sensitive Fusion Protein Attachment Protein Receptor) are a class of membrane proteins that mediate membrane-membrane fusion in eukaryotic cells. SNAP-23 is a t-SNARE which is a component of cellular machinery is required for membrane fusion. SNAP-23 lacks transmembrane domain. Cysteines in the linker region of SNAP-23 are involved in targeting of SNAP-23 to the membrane. In the present work, a portion of MDR3 gene (MDR3 1-145) and CLP24 (CLP134-195) was subcloned into a plasmid encoding EGFP-SNAP-23 Cys- mutant for the generation of a fusion protein containing the two functional coiled-coil domain of t-SNARE, SNAP 23 and a transmembrane domain of MDR3 gene and CLP24 for mast cell. This fusion protein will be important to study the membrane targeting and raft association of the chimeric SNAP23 protein, which plays an important role in mast cell exocytosis in the mammalian system. A novel bioinformatics approach has been applied to identify the specific transmembrane domain. This novel approach can be used to construct other fusion proteins

Studies on the toxicity of 2-Methyltetrahydrofuran on the histopathology of gills of African catfish Clarias gariepinus

In the present study, investigation were carried out on gills of African cat fish Clarias gariepinus exposed to sub lethal concentrations (80mg/ml,400mg/ml and 800mg/ml) of 2-Methyltetrahydrofuran for 10 days. Lesions were observed in gills tissue of treated fish for long term exposure to Methyltetrahydrofuran (2MTHF). The occurrence and degree of alteration were positively related with the concentration of 2MTHF. Histological examination of the gills of fish treated with 80 mg/ml of 2MTHF for 10 days showed architectural loss, necrosis and desquamation of epithelial layer. Histological examination of the gills of fish treated with 400 mg/ml of 2MTHF for 10 days showed architectural loss, necrosis and mild vaccuolation. The gill filament exhibited telangiectesis, disorganisation of secondary gill lamellae and complete vaccuolation of gills  treated with 800 mg/ml of 2MTHF for 10 days.  The study indicated that 2MTHF had marked effects on the cyto-architecture of the gills of C. gariepinus.  The degree of vaccuolation and necrosis were positively related with the concentration of 2MTHF

Differential gene expression and co-regulated expression of genes in leukemia: an in-silico approach to identify potent biomarker

A biomarker can be measured, used to diagnose or classify disease, and measure progress as well as the therapeutic response of the disease. Early diagnosis and selection of appropriate treatment can be critical for the successful treatment of diseases. Identification and characterization of potent diagnostic biomarkers, and therapeutic targets rely heavily on traditional in vitro screens which require extensive resources and time. Integration of in silico screens prior to experimental validation can improve the efficiency and potency of biomarkers as well as reduce the cost and time of biomarker discovery. Considering the need, present work was undertaken to identify biomarkers for different classes of leukemia. Differential Gene Expression (DGE) analysis and co-regulated expression analysis were used for in silico identification and characterise a potent biomarker for leukemia. On the basis of in silico screening, the present study proposed seven protein-coding (CD38, TSC22D3, TNFRSF25, AGL, LARGE1, ARHGAP32, and PARM1) genes for the diagnosis of leukemia. The study also proposed a novel three-step lineage-specific model for the diagnosis of leukemia. In the three-step diagnosis model, the first group of biomarkers with an association of clinical and hematological parameters diagnose leukemia. The second group of biomarkers diagnoses acute and chronic form of leukemia. The third group of biomarkers identifies whether it belongs to myeloid lineage or lymphoid lineage

Studies on the morphology of leukaemic blast cells in relation to haematological parameters

A combination of haematological parameters with morphological evaluation of peripheral blood and bone marrow blast cells is crucial for leukaemia diagnosis. FAB (French– American–British) classification is a simple and powerful diagnostic tool for leukaemia           in developing countries like India. Differentiation block in the early stages of haematopoiesis and morphological characteristics of leukemic blast cells are directly related to haematological parameters. The present study is an approach to increase understanding of the simple morphological FAB classification of leukaemia  in relation to haematological parameters. The present study revealed that Chronic Myeloid Leukaemia  (CML) was the most common type of leukaemia , followed by Acute Myeloid Leukaemia, Acute Lymphoid Leukaemia  (ALL), and Chronic Lymphoid Leukaemia  (CLL) in Nagpur. Most of the cases of Acute Leukaemia  had severe anaemia and thrombocytopenia. Highest variation was found in Total WBCs count of different types of leukaemia , particularly in different subtypes of AML. The present study also suggested that FAB classification is not outdated, but it does require continuous revalidation and other procedures for refinement.          &nbsp

On one-sided estimates for row-finite systems of ordinary differential equations

summary:We prove an existence and uniqueness theorem for row-finite initial value problems. The right-hand side of the differential equation is supposed to satisfy a one-sided matrix Lipschitz condition with a quasimonotone row-finite matrix which has an at most countable spectrum