MOESM1 of Ribosome profiling of the retrovirus murine leukemia virus

Additional file 1: Table S1. Library composition statistics. Figure S1. RPF distributions on host mRNAs. Figure S2. Length distributions of reads mapping to viral and host RNA. Figure S3. Alignment of the 5′ regions of gammaretroviral genomic sequences. Figure S4. Codon-based alignment of gammaretroviral pol genes downstream of the env splice acceptor

Juncus wallichianus Laharpe

原著和名: ハリカウガイゼキシャウ(コモチカウガイゼキシャウ)科名: イグサ科 = Juncaceae採集地: 鹿児島県 屋久島 上屋久町 小杉谷〜花之江河 (大隅 屋久島 小杉谷〜花之江河)採集日: 1965/7/20採集者: 萩庭丈壽整理番号: JH019327国立科学博物館整理番号: TNS-VS-96932

Additional file 4: Figure S3. of High-throughput transcriptomics reveals common and strain-specific responses of human macrophages to infection with Mycobacterium abscessus Smooth and Rough variants

Multidimensional scaling (MDS) plot of libraries at the indicated time point post infection, based upon log Fold Change (logFC) values of expressed genes. Infected and uninfected libraries are observed to cluster discretely at each time point. (PNG 37 kb

Additional file 6: Table S3. of High-throughput transcriptomics reveals common and strain-specific responses of human macrophages to infection with Mycobacterium abscessus Smooth and Rough variants

Overlap of the core responses to MAB and MTB. 73 genes were identified in both datasets. “Induced” indicates that the gene shows an increase in abundance upon infection; “Repressed” indicates that the gene shows a decrease in abundance upon infection. (XLSX 8 kb

Additional file 3: Table S1. of High-throughput transcriptomics reveals common and strain-specific responses of human macrophages to infection with Mycobacterium abscessus Smooth and Rough variants

Read mapping statistics for RNA-seq and small RNA-seq (sRNA-seq) libraries. For RNA-seq libraries, the numbers of reads mapping uniquely to the human reference genome are indicated. For sRNA-seq libraries, the numbers of reads mapping to mature miRNAs from miRBase are given. (XLSX 7 kb

Additional file 9: Table S4. of High-throughput transcriptomics reveals common and strain-specific responses of human macrophages to infection with Mycobacterium abscessus Smooth and Rough variants

Differentially expressed (DE) miRNAs identified in response to MAB-R and MAB-S infection. miRNAs were regarded as DE if they had an absolute Log2 Fold Change of at least 1, and an adjusted P-value (FDR) of less than 0.05. (XLSX 7 kb

Boletín de Segovia: Número 147 - 1841 diciembre 9

Copia digital. Madrid : Ministerio de Cultura. Subdirección General de Coordinación Bibliotecaria, 200