Geometry and topology of knotted ring polymers in an array of obstacles

We study knotted polymers in equilibrium with an array of obstacles which models confinement in a gel or immersion in a melt. We find a crossover in both the geometrical and the topological behavior of the polymer. When the polymers' radius of gyration, $R_G$, and that of the region containing the knot, $R_{G,k}$, are small compared to the distance b between the obstacles, the knot is weakly localised and $R_G$ scales as in a good solvent with an amplitude that depends on knot type. In an intermediate regime where $R_G > b > R_{G,k}$, the geometry of the polymer becomes branched. When $R_{G,k}$ exceeds b, the knot delocalises and becomes also branched. In this regime, $R_G$ is independent of knot type. We discuss the implications of this behavior for gel electrophoresis experiments on knotted DNA in weak fields.Comment: 4 pages, 6 figure

Positivity violation for the lattice Landau gluon propagator

We present explicit numerical evidence of reflection-positivity violation for the lattice Landau gluon propagator in three-dimensional pure SU(2) gauge theory. We use data obtained at very large lattice volumes (V = 80^3, 140^3) and for three different lattice couplings in the scaling region (beta = 4.2, 5.0, 6.0). In particular, we observe a clear oscillatory pattern in the real-space propagator C(t). We also verify that the (real-space) data show good scaling in the range t \in [0,3] fm and can be fitted using a Gribov-like form. The violation of positivity is in contradiction with a stable-particle interpretation of the associated field theory and may be viewed as a manifestation of confinement.Comment: 5 pages, 6 figures; minor modifications in the text and in the bibliograph

Anomalous scaling due to correlations: Limit theorems and self-similar processes

We derive theorems which outline explicit mechanisms by which anomalous scaling for the probability density function of the sum of many correlated random variables asymptotically prevails. The results characterize general anomalous scaling forms, justify their universal character, and specify universality domains in the spaces of joint probability density functions of the summand variables. These density functions are assumed to be invariant under arbitrary permutations of their arguments. Examples from the theory of critical phenomena are discussed. The novel notion of stability implied by the limit theorems also allows us to define sequences of random variables whose sum satisfies anomalous scaling for any finite number of summands. If regarded as developing in time, the stochastic processes described by these variables are non-Markovian generalizations of Gaussian processes with uncorrelated increments, and provide, e.g., explicit realizations of a recently proposed model of index evolution in finance.Comment: Through text revision. 15 pages, 3 figure

Roles of stiffness and excluded volume in DNA denaturation

The nature and the universal properties of DNA thermal denaturation are investigated by Monte Carlo simulations. For suitable lattice models we determine the exponent c describing the decay of the probability distribution of denaturated loops of length l, $P \sim l^{-c}$. If excluded volume effects are fully taken into account, c= 2.10(4) is consistent with a first order transition. The stiffness of the double stranded chain has the effect of sharpening the transition, if it is continuous, but not of changing its order and the value of the exponent c, which is also robust with respect to inclusion of specific base-pair sequence heterogeneities.Comment: RevTeX 4 Pages and 4 PostScript figures included. Final version as publishe

Sequence randomness and polymer collapse transitions

Contrary to expectations based on Harris' criterion, chain disorder with frustration can modify the universality class of scaling at the theta transition of heteropolymers. This is shown for a model with random two-body potentials in 2D on the basis of exact enumeration and accurate Monte Carlo results. When frustration grows beyond a certain finite threshold, the temperature below which disorder becomes relevant coincides with the theta one and scaling exponents definitely start deviating from those valid for homopolymers.Comment: 4 pages, 4 eps figure

Numerical Study of Gluon Propagator and Confinement Scenario in Minimal Coulomb Gauge

We present numerical results in SU(2) lattice gauge theory for the space-space and time-time components of the gluon propagator at equal time in the minimal Coulomb gauge. It is found that the equal-time would-be physical 3-dimensionally transverse gluon propagator $D^{tr}(\vec{k})$ vanishes at $\vec{k} = 0$ when extrapolated to infinite lattice volume, whereas the instantaneous color-Coulomb potential $D_{44}(\vec{k})$ is strongly enhanced at $\vec{k} = 0$. This has a natural interpretation in a confinement scenario in which the would-be physical gluons leave the physical spectrum while the long-range Coulomb force confines color. Gribov's formula $D^{tr}(\vec{k}) = (|\vec{k}|/2)[(\vec{k}^2)^2 + M^4]^{1/2}$ provides an excellent fit to our data for the 3-dimensionally transverse equal-time gluon propagator $D^{tr}(\vec{k})$ for relevant values of $\vec{k}$.Comment: 23 pages, 12 figures, TeX file. Minor modifications, incorporating referee's suggestion

The development of a new blood substitute

Trattasi di un sommario pubblicato online nel sito dell'Agenzia di divulgazione scientifica Atlas of Science, AoS Nordic AB, Moscow, Russia, riguardante l'impiego di nuovi sostituti del sangu

From waves to avalanches: two different mechanisms of sandpile dynamics

Time series resulting from wave decomposition show the existence of different correlation patterns for avalanche dynamics. For the d=2 Bak-Tang-Wiesenfeld model, long range correlations determine a modification of the wave size distribution under coarse graining in time, and multifractal scaling for avalanches. In the Manna model, the distribution of avalanches coincides with that of waves, which are uncorrelated and obey finite size scaling, a result expected also for the d=3 Bak et al. model.Comment: 5 pages, 4 figure

SU(2) Landau gluon propagator on a 140^3 lattice

We present a numerical study of the gluon propagator in lattice Landau gauge for three-dimensional pure-SU(2) lattice gauge theory at couplings beta = 4.2, 5.0, 6.0 and for lattice volumes V = 40^3, 80^3, 140^3. In the limit of large V we observe a decreasing gluon propagator for momenta smaller than p_{dec} = 350^{+ 100}_{- 50} MeV. Data are well fitted by Gribov-like formulae and seem to indicate an infra-red critical exponent kappa slightly above 0.6, in agreement with recent analytic results.Comment: 5 pages with 2 figures and 3 tables; added a paragraph on discretization effect