5,810 research outputs found
Passive phloem loading and long-distance transport in a synthetic tree-on-a-chip
Vascular plants rely on differences of osmotic pressure to export sugars from
regions of synthesis (mature leaves) to sugar sinks (roots, fruits). In this
process, known as M\"unch pressure flow, the loading of sugars from
photosynthetic cells to the export conduit (the phloem) is crucial, as it sets
the pressure head necessary to power long-distance transport. Whereas most
herbaceous plants use active mechanisms to increase phloem concentration above
that of the photosynthetic cells, in most tree species, for which transport
distances are largest, loading seems to occur via passive symplastic diffusion
from the mesophyll to the phloem. Here, we use a synthetic microfluidic model
of a passive loader to explore the nonlinear dynamics that arise during export
and determine the ability of passive loading to drive long-distance transport.
We first demonstrate that in our device, phloem concentration is set by the
balance between the resistances to diffusive loading from the source and
convective export through the phloem. Convection-limited export corresponds to
classical models of M\"unch transport, where phloem concentration is close to
that of the source; in contrast, diffusion-limited export leads to small phloem
concentrations and weak scaling of flow rates with the hydraulic resistance. We
then show that the effective regime of convection-limited export is predominant
in plants with large transport resistances and low xylem pressures. Moreover,
hydrostatic pressures developed in our synthetic passive loader can reach
botanically relevant values as high as 10 bars. We conclude that passive
loading is sufficient to drive long-distance transport in large plants, and
that trees are well suited to take full advantage of passive phloem loading
strategies
Gut microbial activity as influenced by fiber digestion: dynamic metabolomics in an in vitro colon simulator
Understanding the interaction between the gut microbial activity and the host is essential, and in vitro models are being used to test and develop hypotheses regarding the impact of food components/drugs on the human gut ecosystem. However, while in vitro models provide excellent possibilities for dynamic investigations, studies have commonly been restricted to analyses of few, targeted metabolites. In the present study, we employed NMR-based metabolomics combined with multilevel data analysis as a tool to characterize the impact of polydextrose (PDX) fiber on the in vitro derived fecal metabolome. This approach enabled us to identify and quantify the fiber-induced response on several fecal metabolites; we observed higher levels of butyrate, acetate, propionate, succinate, N-acetyl compound and a lower level of amino acids (leucine, valine, isoleucine, phenylalanine, and lysine), valerate, formate, isovalerate and trimethylamine among the PDX-treated sample compared to the control samples. In addition, by the application of multilevel data analysis we were able to examine the specific inter-individual variations, and caprylic acid was identified to be the main marker of distinct microbial compositions among the subjects. Our work is expected to provide a useful approach to understand the metabolic impact of potential prebiotic compounds and get deeper insight into the molecular regulation of gut-microbe activities in the complex gut system
Preparation of Ni–YSZ thin and thick films on metallic interconnects as cell supports. Applications as anode for SOFC
In this work, we propose the preparation of a duplex anodic layer composed of both a thin (100 nm) and a thick film (10 lm) with Ni–YSZ material. The support of this anode is a metallic substrate, which is the interconnect of the SOFC unit cell. The metallic support limits the temperature of thermal treatment at 800 C to keep a good interconnect mechanical behaviour and to reduce corrosion. We have chosen to elaborate anodic coatings by sol–gel route coupled with dip-coating process, which are low cost techniques and allow working with moderate temperatures. Thin films are obtained by dipping interconnect substrate into a sol, and thick films into an optimized slurry. After thermal treatment at only 800 C, anodic coatings are adherent and homogeneous. Thin films have compact microstructures that confer ceramic protective barrier on metal surface. Further coatings of 10 lm thick are porous and constitute the active anodic material
Under-five mortality: spatial-temporal clusters in Ifakara HDSS in South-eastern Tanzania.
BACKGROUND\ud
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Childhood mortality remains an important subject, particularly in sub-Saharan Africa where levels are still unacceptably high. To achieve the set Millennium Development Goals 4, calls for comprehensive application of the proven cost-effective interventions. Understanding spatial clustering of childhood mortality can provide a guide in targeting the interventions in a more strategic approach to the population where mortality is highest and the interventions are most likely to make an impact.\ud
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METHODS\ud
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Annual child mortality rates were calculated for each village, using person-years observed as the denominator. Kulldorff's spatial scan statistic was used for the identification and testing of childhood mortality clusters. All under-five deaths that occurred within a 10-year period from 1997 to 2006 were included in the analysis. Villages were used as units of clusters; all 25 health and demographic surveillance sites (HDSS) villages in the Ifakara health and demographic surveillance area were included.\ud
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RESULTS\ud
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Of the 10 years of analysis, statistically significant spatial clustering was identified in only 2 years (1998 and 2001). In 1998, the statistically significant cluster (p < 0.01) was composed of nine villages. A total of 106 childhood deaths were observed against an expected 77.3. The other statistically significant cluster (p < 0.05) identified in 2001 was composed of only one village. In this cluster, 36 childhood deaths were observed compared to 20.3 expected. Purely temporal analysis indicated that the year 2003 was a significant cluster (p < 0.05). Total deaths were 393 and expected were 335.8. Spatial-temporal analysis showed that nine villages were identified as statistically significant clusters (p < 0.05) for the period covering January 1997-December 1998. Total observed deaths in this cluster were 205 while 150.7 were expected.\ud
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CONCLUSION\ud
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There is evidence of spatial clustering in childhood mortality within the Ifakara HDSS. Further investigations are needed to explore the source of clustering and identify strategies of reaching the cluster population with the existing effective interventions. However, that should happen alongside delivery of interventions to the broader population
A Mechanical Mass Sensor with Yoctogram Resolution
Nanoelectromechanical systems (NEMS) have generated considerable interest as
inertial mass sensors. NEMS resonators have been used to weigh cells,
biomolecules, and gas molecules, creating many new possibilities for biological
and chemical analysis [1-4]. Recently, NEMS-based mass sensors have been
employed as a new tool in surface science in order to study e.g. the phase
transitions or the diffusion of adsorbed atoms on nanoscale objects [5-7]. A
key point in all these experiments is the ability to resolve small masses. Here
we report on mass sensing experiments with a resolution of 1.7 yg (1 yg =
10^-24 g), which corresponds to the mass of one proton, or one hydrogen atom.
The resonator is made of a ~150 nm long carbon nanotube resonator vibrating at
nearly 2 GHz. The unprecedented level of sensitivity allows us to detect
adsorption events of naphthalene molecules (C10H8) and to measure the binding
energy of a Xe atom on the nanotube surface (131 meV). These ultrasensitive
nanotube resonators offer new opportunities for mass spectrometry,
magnetometry, and adsorption experiments.Comment: submitted version of the manuscrip
A Repeated Measures Experiment of Green Exercise to Improve Self-Esteem in UK School Children
Exercising in natural, green environments creates greater improvements in adult's self-esteem than exercise undertaken in urban or indoor settings. No comparable data are available for children. The aim of this study was to determine whether so called 'green exercise' affected changes in self-esteem; enjoyment and perceived exertion in children differently to urban exercise. We assessed cardiorespiratory fitness (20 m shuttle-run) and self-reported physical activity (PAQ-A) in 11 and 12 year olds (n = 75). Each pupil completed two 1.5 mile timed runs, one in an urban and another in a rural environment. Trials were completed one week apart during scheduled physical education lessons allocated using a repeated measures design. Self-esteem was measured before and after each trial, ratings of perceived exertion (RPE) and enjoyment were assessed after completing each trial. We found a significant main effect (F (1,74), = 12.2, p<0.001), for the increase in self-esteem following exercise but there was no condition by exercise interaction (F (1,74), = 0.13, p = 0.72). There were no significant differences in perceived exertion or enjoyment between conditions. There was a negative correlation (r = -0.26, p = 0.04) between habitual physical activity and RPE during the control condition, which was not evident in the green exercise condition (r = -0.07, p = 0.55). Contrary to previous studies in adults, green exercise did not produce significantly greater increases in self-esteem than the urban exercise condition. Green exercise was enjoyed more equally by children with differing levels of habitual physical activity and has the potential to engage less active children in exercise. © 2013 Reed et al
CDK-dependent nuclear localization of B-Cyclin Clb1 promotes FEAR activation during meiosis I in budding yeast
Cyclin-dependent kinases (CDK) are master regulators of the cell cycle in eukaryotes. CDK activity is regulated by the presence, post-translational modification and spatial localization of its regulatory subunit cyclin. In budding yeast, the B-cyclin Clb1 is phosphorylated and localizes to the nucleus during meiosis I. However the functional significance of Clb1's phosphorylation and nuclear localization and their mutual dependency is unknown. In this paper, we demonstrate that meiosis-specific phosphorylation of Clb1 requires its import to the nucleus but not vice versa. While Clb1 phosphorylation is dependent on activity of both CDK and polo-like kinase Cdc5, its nuclear localization requires CDK but not Cdc5 activity. Furthermore we show that increased nuclear localization of Clb1 during meiosis enhances activation of FEAR (Cdc Fourteen Early Anaphase Release) pathway. We discuss the significance of our results in relation to regulation of exit from meiosis I
Interaction imaging with amplitude-dependence force spectroscopy
Knowledge of surface forces is the key to understanding a large number of
processes in fields ranging from physics to material science and biology. The
most common method to study surfaces is dynamic atomic force microscopy (AFM).
Dynamic AFM has been enormously successful in imaging surface topography, even
to atomic resolution, but the force between the AFM tip and the surface remains
unknown during imaging. Here, we present a new approach that combines high
accuracy force measurements and high resolution scanning. The method, called
amplitude-dependence force spectroscopy (ADFS) is based on the
amplitude-dependence of the cantilever's response near resonance and allows for
separate determination of both conservative and dissipative tip-surface
interactions. We use ADFS to quantitatively study and map the nano-mechanical
interaction between the AFM tip and heterogeneous polymer surfaces. ADFS is
compatible with commercial atomic force microscopes and we anticipate its
wide-spread use in taking AFM toward quantitative microscopy
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