Statics and Dynamics of Yukawa Cluster Crystals on Ordered Substrates

We examine the statics and dynamics of particles with repulsive Yukawa interactions in the presence of a two-dimensional triangular substrate for fillings of up to twelve particles per potential minimum. We term the ordered states Yukawa cluster crystals and show that they are distinct from the colloidal molecular crystal states found at low fillings. As a function of substrate and interaction strength at fixed particle density we find a series of novel crystalline states that we characterize using the structure factor. For fillings greater than four, shell and ring structures form at each potential minimum and can exhibit sample-wide orientational order. A disordered state can appear between ordered states as the substrate strength varies. Under an external drive, the onsets of different orderings produce clear changes in the critical depinning force, including a peak effect phenomenon that has generally only previously been observed in systems with random substrates. We also find a rich variety of dynamic ordering transitions that can be observed via changes in the structure factor and features in the velocity-force curves. The dynamical states encompass a variety of moving structures including one-dimensional stripes, smectic ordering, polycrystalline states, triangular lattices, and symmetry locking states. Despite the complexity of the system, we identify several generic features of the dynamical phase transitions which we map out in a series of phase diagrams. Our results have implications for the structure and depinning of colloids on periodic substrates, vortices in superconductors and Bose-Einstein condensates, Wigner crystals, and dusty plasmas.Comment: 14 pages, 17 postscript figure

Quantification of Local Hemodynamic Alterations Caused by Virtual Implantation of Three Commercially Available Stents for the Treatment of Aortic Coarctation

Patients with coarctation of the aorta (CoA) are prone to morbidity including atherosclerotic plaque that has been shown to correlate with altered wall shear stress (WSS) in the descending thoracic aorta (dAo). We created the first patient-specific computational fluid dynamics (CFD) model of a CoA patient treated by Palmaz stenting to date, and compared resulting WSS distributions to those from virtual implantation of Genesis XD and modified NuMED CP stents, also commonly used for CoA. CFD models were created from magnetic resonance imaging, fluoroscopy and blood pressure data. Simulations incorporated vessel deformation, downstream vascular resistance and compliance to match measured data and generate blood flow velocity and time-averaged WSS (TAWSS) results. TAWSS was quantified longitudinally and circumferentially in the stented region and dAo. While modest differences were seen in the distal portion of the stented region, marked differences were observed downstream along the posterior dAo and depended on stent type. The Genesis XD model had the least area of TAWSS values exceeding the threshold for platelet aggregation in vitro, followed by the Palmaz and NuMED CP stents. Alterations in local blood flow patterns and WSS imparted on the dAo appear to depend on the type of stent implanted for CoA. Following confirmation in larger studies, these findings may aid pediatric interventional cardiologists in selecting the most appropriate stent for each patient, and ultimately reduce long-term morbidity following treatment for CoA by stenting

Ordering and Melting in Colloidal Molecular Crystal Mixtures

We show in simulations that a rich variety of novel orderings such as pinwheel and star states can be realized for colloidal molecular crystal mixtures at rational ratios of the number of colloids to the number of minima from an underlying periodic substrate. These states can have multi-step melting transitions and also show coexistence in which one species disorders while the other species remains orientationally disordered. For other mixtures, only partially ordered or frustrated states form.Comment: 4 pages, 4 postscript figure

Visualization of the birth of an optical vortex using diffraction from a triangular aperture

Funding: EPSRC, UKThe study and application of optical vortices have gained significant prominence over the last two decades. An interesting challenge remains the determination of the azimuthal index (topological charge) l of an optical vortex beam for a range of applications. We explore the diffraction of such beams from a triangular aperture and observe that the form of the resultant diffraction pattern is dependent upon both the magnitude and sign of the azimuthal index and this is valid for both monochromatic and broadband light fields. For the first time we demonstrate that this behavior is related not only to the azimuthal index but crucially the Gouy phase component of the incident beam. In particular, we explore the far field diffraction pattern for incident fields incident upon a triangular aperture possessing non-integer values of the azimuthal index l. Such fields have a complex vortex structure. We are able to infer the birth of a vortex which occurs at half-integer values of l and explore its evolution by observations of the diffraction pattern. These results demonstrate the extended versatility of a triangular aperture for the study of optical vortices. (c) 2011 Optical Society of AmericaPublisher PDFPeer reviewe

Combined information from Raman spectroscopy and optical coherence tomography for enhanced diagnostic accuracy in tissue discrimination

We thank the UK EPSRC for funding, the CR-UK/EPSRC/MRC/DoH (England) imaging programme, the European Union project FAMOS (FP7 ICT, contract no. 317744) and the European Union project IIIOS (FP7/2007-2013, contract no. 238802). We thank Tayside Tissue Bank for providing us with the tissue samples under request number TR000289. K.D. is a Royal Society-Wolfson Merit Award Holder.Optical spectroscopy and imaging methods have proved to have potential to discriminate between normal and abnormal tissue types through minimally invasive procedures. Raman spectroscopy and Optical Coherence Tomography (OCT) provides chemical and morphological information of tissues respectively, which are complementary to each other. When used individually they might not be able to obtain high enough sensitivity and specificity that is clinically relevant. In this study we combined Raman spectroscopy information with information obtained from OCT to enhance the sensitivity and specificity in discriminating between Colonic Adenocarcinoma from Normal Colon. OCT being an imaging technique, the information from this technique is conventionally analyzed qualitatively. To combine with Raman spectroscopy information, it was essential to quantify the morphological information obtained from OCT. Texture analysis was used to extract information from OCT images, which in-turn was combined with the information obtained from Raman spectroscopy. The sensitivity and specificity of the classifier was estimated using leave one out cross validation (LOOCV) method where support vector machine (SVM) was used for binary classification of the tissues. The sensitivity obtained using Raman spectroscopy and OCT individually was 89% and 78% respectively and the specificity was 77% and 74% respectively. Combining the information derived using the two techniques increased both sensitivity and specificity to 94% demonstrating that combining complementary optical information enhances diagnostic accuracy. These results demonstrate that a multimodal approach using Raman-OCT would be able to enhance the diagnostic accuracy for identifying normal and cancerous tissue types.Publisher PD

A single structured light beam as an atomic cloud splitter

We propose a scheme to split a cloud of cold non-interacting neutral atoms based on their dipole interaction with a single structured light beam which exhibits parabolic cylindrical symmetry. Using semiclassical numerical simulations, we establish a direct relationship between the general properties of the light beam and the relevant geometric and kinematic properties acquired by the atomic cloud as its passes through the beam.Comment: 10 pages, 5 figure

Nonlinear dynamics, rectification, and phase locking for particles on symmetrical two-dimensional periodic substrates with dc and circular ac drives

We investigate the dynamical motion of particles on a two-dimensional symmetric periodic substrate in the presence of both a dc drive along a symmetry direction of the periodic substrate and an additional circular ac drive. For large enough ac drives, the particle orbit encircles one or more potential maxima of the periodic substrate. In this case, when an additional increasing dc drive is applied in the longitudinal direction, the longitudinal velocity increases in a series of discrete steps that are integer multiples of the lattice constant of the substrate times the frequency. Fractional steps can also occur. These integer and fractional steps correspond to distinct stable dynamical orbits. A number of these phases also show a rectification in the positive or negative transverse direction where a non-zero transverse velocity occurs in the absence of a dc transverse drive. We map out the phase diagrams of the regions of rectification as a function of ac amplitude, and find a series of tongues. Most of the features, including the steps in the longitudinal velocity and the transverse rectification, can be captured with a simple toy model and by arguments from nonlinear maps. We have also investigated the effects of thermal disorder and incommensuration on the rectification phenomena, and find that for increasing disorder, the rectification regions are gradually smeared and the longitudinal velocity steps are no longer flat but show a linearly increasing velocity.Comment: 14 pages, 17 postscript figure

Spatially optimized gene transfection by laser-induced breakdown of optically trapped nanoparticles

We demonstrate laser-induced breakdown of an optically trapped nanoparticle with a nanosecond laser pulse. Controllable cavitation within a microscope sample was achieved, generating shear stress to monolayers of live cells. This efficiently permeabilize their plasma membranes. We show that this technique is an excellent tool for plasmid-DNA transfection of cells with both reduced energy requirements and reduced cell lysis compared to previously reported approaches. Simultaneous multisite targeted nanosurgery of cells is also demonstrated using a spatial light modulator for parallelizing the technique.Publisher PDFPeer reviewe

Computational simulations demonstrate altered wall shear stress in aortic coarctation patients previously treated by resection with end-to-end anastomosis

Background.  Atherosclerotic plaque in the descending thoracic aorta (dAo) is related to altered wall shear stress (WSS) for normal patients. Resection with end-to-end anastomosis (RWEA) is the gold standard for coarctation of the aorta (CoA) repair, but may lead to altered WSS indices that contribute to morbidity. Methods.  Computational fluid dynamics (CFD) models were created from imaging and blood pressure data for control subjects and age- and gender-matched CoA patients treated by RWEA (four males, two females, 15 ± 8 years). CFD analysis incorporated downstream vascular resistance and compliance to generate blood flow velocity, time-averaged WSS (TAWSS), and oscillatory shear index (OSI) results. These indices were quantified longitudinally and circumferentially in the dAo, and several visualization methods were used to highlight regions of potential hemodynamic susceptibility. Results.  The total dAo area exposed to subnormal TAWSS and OSI was similar between groups, but several statistically significant local differences were revealed. Control subjects experienced left-handed rotating patterns of TAWSS and OSI down the dAo. TAWSS was elevated in CoA patients near the site of residual narrowings and OSI was elevated distally, particularly along the left dAo wall. Differences in WSS indices between groups were negligible more than 5 dAo diameters distal to the aortic arch. Conclusions.  Localized differences in WSS indices within the dAo of CoA patients treated by RWEA suggest that plaque may form in unique locations influenced by the surgical repair. These regions can be visualized in familiar and intuitive ways allowing clinicians to track their contribution to morbidity in longitudinal studies

Optically bound microscopic particles in one dimension

Counter-propagating light fields have the ability to create self-organized one-dimensional optically bound arrays of microscopic particles, where the light fields adapt to the particle locations and vice versa. We develop a theoretical model to describe this situation and show good agreement with recent experimental data (Phys. Rev. Lett. 89, 128301 (2002)) for two and three particles, if the scattering force is assumed to dominate the axial trapping of the particles. The extension of these ideas to two and three dimensional optically bound states is also discussed.Comment: 12 pages, incl. 5 figures, accepted by Phys. Rev.