267 research outputs found

    Information security for college students

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    The content of the article deals with the essence of the concepts of "security", "information security", "security threat", "economic security". The author analyzes in more detail the concept of "information security"Π’ содСрТании ΡΡ‚Π°Ρ‚ΡŒΠΈ рассматриваСтся ΡΡƒΡ‰Π½ΠΎΡΡ‚ΡŒ понятий Β«Π±Π΅Π·ΠΎΠΏΠ°ΡΠ½ΠΎΡΡ‚ΡŒΒ», «информационная Π±Π΅Π·ΠΎΠΏΠ°ΡΠ½ΠΎΡΡ‚ΡŒΒ», Β«ΡƒΠ³Ρ€ΠΎΠ·Π° бСзопасности», «экономичСская Π±Π΅Π·ΠΎΠΏΠ°ΡΠ½ΠΎΡΡ‚ΡŒΒ». Автор Π±ΠΎΠ»Π΅Π΅ ΠΏΠΎΠ΄Ρ€ΠΎΠ±Π½ΠΎ Π°Π½Π°Π»ΠΈΠ·ΠΈΡ€ΡƒΠ΅Ρ‚ понятиС «информационная Π±Π΅Π·ΠΎΠΏΠ°ΡΠ½ΠΎΡΡ‚ΡŒ

    Mixed hybrid finite element scheme for stefan problem with prescribed convection

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    We construct a mixed hybrid finite element scheme of lowest order for the Stefan problem with prescribed convection and suggest and investigate an iterative method for its solution. In the iterative method we use a preconditioner constructed by using "standard" finite element approximation of Laplace operator on a finer grid. The proposed approach develops the results of [1], where a spectrally equivalent preconditioner for the condensed matrix in mixed hybrid finite element approximation for linear elliptic equation was constructed

    Influence of World Economic and Credit Ratings on the Investment Climate of the Republic of Belarus

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    In this article abstract is considered as the situation of the Republic of Belarus in the world economic and credit ratings. Also there are made the conclusions about the dynamic of analyzed indicators and tendencies of the differences of analyzed facts

    NORMATIVE-COMPETENCE MODEL OF THE TEACHER OF THE ADDITIONAL PROFESSIONAL EDUCATION SYSTEM

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    Introduction. The growth of requirements for the quality and effectiveness of educational activities, identified in a number of government documents, determines the need to normalize the professional activities of teaching staff. The aim of this article is to present the normative-competence model of the teacher of additional professional education developed by the Department of Pedagogy and Andragogy of the Nizhny Novgorod Institute of Education Development, and to substantiate the potential of this model as an effective mechanism of intracorporate support of continuous professional development of the institutes of advanced training of specialists teaching staff. Methodology and research methods. The general theoretical basis for the design of the normative-competence model of the teacher consists of the system-activity, competency-based, andragogical, comparative general scientific approaches. The methods of the qualification and dispersive analysis, expert estimations, participant observation, stratified sampling were used to determine the efficiency of the model and diagnostics of professional competences of teachers of additional professional education. Processing of the data obtained was performed by the methods of mathematical statistics – the analysis of reliability of mathematical expectation differences and hypotheses checking on the basis of fitting criterion. Results and scientific novelty. The presented model contains a set of key qualities that provide the pedagogical worker with the ability to be successful in achieving the strategic educational goals. The structure of the model includes the clusters of universal, general professional and professional competencies; maps and indicators of competencies divided into three levels – monodisciplinary, multidisciplinary, metadisciplinary. The advantage of the model is that it can serve as a framework for objective assessment of professionalism of teachers of additional professional education as well as a standard framework to upgrade teachers’ qualification and self-development. The hypothesis on the conditions of the model realization was tested in the course of the project experiment conducted by the authors. The conditions of three types presented: content-activity, organizational-managerial, and the ability to transform the conditions of the first and second types for professional development of the teachers. The inputs and outputs research results on teachers’ competencies by the end of the three-year intra-corporate training curriculum β€œAndragogical School of Eventual Education” have shown the efficiency of application of the developed model in the format of self-training organization. Practical significance. The normative-competence model is universal and fully consistent with the requirements of the teachers’ career development system. The model presented provides the groundwork for scientific and educational activity of the teacher of additional professional education and can be used by everyone who is engaged in educational activity in the conditions of continuous pedagogical education.Π’Π²Π΅Π΄Π΅Π½ΠΈΠ΅. Π”Π΅ΠΊΠ»Π°Ρ€ΠΈΡ€ΡƒΠ΅ΠΌΡ‹Π΅ Π² Ρ†Π΅Π»ΠΎΠΌ рядС ΠΏΡ€Π°Π²ΠΈΡ‚Π΅Π»ΡŒΡΡ‚Π²Π΅Π½Π½Ρ‹Ρ… Π΄ΠΎΠΊΡƒΠΌΠ΅Π½Ρ‚ΠΎΠ² трСбования ΠΊ качСству ΠΈ эффСктивности функционирования ΠΎΠ±Ρ€Π°Π·ΠΎΠ²Π°Ρ‚Π΅Π»ΡŒΠ½ΠΎΠΉ сфСры Π°ΠΊΡ‚ΡƒΠ°Π»ΠΈΠ·ΠΈΡ€ΡƒΡŽΡ‚ Π½Π΅ΠΎΠ±Ρ…ΠΎΠ΄ΠΈΠΌΠΎΡΡ‚ΡŒ нормирования ΠΏΡ€ΠΎΡ„Π΅ΡΡΠΈΠΎΠ½Π°Π»ΡŒΠ½ΠΎΠΉ Π΄Π΅ΡΡ‚Π΅Π»ΡŒΠ½ΠΎΡΡ‚ΠΈ пСдагогичСских Ρ€Π°Π±ΠΎΡ‚Π½ΠΈΠΊΠΎΠ². ЦСль ΠΏΡƒΠ±Π»ΠΈΠΊΠ°Ρ†ΠΈΠΈ – ΠΏΡ€Π΅Π΄ΡΡ‚Π°Π²ΠΈΡ‚ΡŒ ΡΠΎΠ·Π΄Π°Π½Π½ΡƒΡŽ Π½Π° ΠΊΠ°Ρ„Π΅Π΄Ρ€Π΅ ΠΏΠ΅Π΄Π°Π³ΠΎΠ³ΠΈΠΊΠΈ ΠΈ Π°Π½Π΄Ρ€Π°Π³ΠΎΠ³ΠΈΠΊΠΈ НиТСгородского института развития образования Π½ΠΎΡ€ΠΌΠ°Ρ‚ΠΈΠ²Π½ΠΎΠΊΠΎΠΌΠΏΠ΅Ρ‚Π΅Π½Ρ‚Π½ΠΎΡΡ‚Π½ΡƒΡŽ модСль прСподаватСля Π΄ΠΎΠΏΠΎΠ»Π½ΠΈΡ‚Π΅Π»ΡŒΠ½ΠΎΠ³ΠΎ ΠΏΡ€ΠΎΡ„Π΅ΡΡΠΈΠΎΠ½Π°Π»ΡŒΠ½ΠΎΠ³ΠΎ образования (Π”ΠŸΠž) ΠΈ ΠΎΠ±ΠΎΡΠ½ΠΎΠ²Π°Ρ‚ΡŒ Π΅Π΅ ΠΏΠΎΡ‚Π΅Π½Ρ†ΠΈΠ°Π» ΠΊΠ°ΠΊ дСйствСнного ΠΌΠ΅Ρ…Π°Π½ΠΈΠ·ΠΌΠ° Π²Π½ΡƒΡ‚Ρ€ΠΈΠΊΠΎΡ€ΠΏΠΎΡ€Π°Ρ‚ΠΈΠ²Π½ΠΎΠΉ ΠΏΠΎΠ΄Π΄Π΅Ρ€ΠΆΠΊΠΈ Π½Π΅ΠΏΡ€Π΅Ρ€Ρ‹Π²Π½ΠΎΠ³ΠΎ ΡΠΎΠ²Π΅Ρ€ΡˆΠ΅Π½ΡΡ‚Π²ΠΎΠ²Π°Π½ΠΈΡ профСссионализма спСциалистов систСмы ΠΏΠΎΠ²Ρ‹ΡˆΠ΅Π½ΠΈΡ ΠΊΠ²Π°Π»ΠΈΡ„ΠΈΠΊΠ°Ρ†ΠΈΠΈ. ΠœΠ΅Ρ‚ΠΎΠ΄ΠΎΠ»ΠΎΠ³ΠΈΡ ΠΈ ΠΌΠ΅Ρ‚ΠΎΠ΄Ρ‹. ΠžΠ±Ρ‰Π΅Ρ‚Π΅ΠΎΡ€Π΅Ρ‚ΠΈΡ‡Π΅ΡΠΊΠΎΠΉ Π±Π°Π·ΠΎΠΉ проСктирования ΠΏΡ€Π΅Π΄Π»Π°Π³Π°Π΅ΠΌΠΎΠΉ вниманию ΠΌΠΎΠ΄Π΅Π»ΠΈ Π±Ρ‹Π»ΠΈ полоТСния систСмно-Π΄Π΅ΡΡ‚Π΅Π»ΡŒΠ½ΠΎΡΡ‚Π½ΠΎΠ³ΠΎ, компСтСнтностного, андрагогичСского ΠΈ ΡΡ€Π°Π²Π½ΠΈΡ‚Π΅Π»ΡŒΠ½ΠΎ-ΡΠΎΠΏΠΎΡΡ‚Π°Π²ΠΈΡ‚Π΅Π»ΡŒΠ½ΠΎΠ³ΠΎ ΠΏΠΎΠ΄Ρ…ΠΎΠ΄ΠΎΠ². Для опрСдСлСния эффСктивности ΠΌΠΎΠ΄Π΅Π»ΠΈ ΠΈ диагностики ΠΏΡ€ΠΎΡ„Π΅ΡΡΠΈΠΎΠ½Π°Π»ΡŒΠ½Ρ‹Ρ… ΠΊΠΎΠΌΠΏΠ΅Ρ‚Π΅Π½Ρ†ΠΈΠΉ ΠΏΡ€Π΅ΠΏΠΎΠ΄Π°Π²Π°Ρ‚Π΅Π»Π΅ΠΉ Π”ΠŸΠž использовались ΠΌΠ΅Ρ‚ΠΎΠ΄Ρ‹ ΠΊΠ²Π°Π»ΠΈΡ„ΠΈΠΊΠ°Ρ†ΠΈΠΎΠ½Π½ΠΎΠ³ΠΎ ΠΈ диспСрсионного Π°Π½Π°Π»ΠΈΠ·Π°, экспСртных ΠΎΡ†Π΅Π½ΠΎΠΊ, Π²ΠΊΠ»ΡŽΡ‡Π΅Π½Π½ΠΎΠ³ΠΎ наблюдСния, стратифицированного ΠΎΡ‚Π±ΠΎΡ€Π°. ΠžΠ±Ρ€Π°Π±ΠΎΡ‚ΠΊΠ° ΠΏΠΎΠ»ΡƒΡ‡Π΅Π½Π½Ρ‹Ρ… Ρ€Π΅Π·ΡƒΠ»ΡŒΡ‚Π°Ρ‚ΠΎΠ² ΠΏΡ€ΠΎΠΈΠ·Π²ΠΎΠ΄ΠΈΠ»Π°ΡΡŒ ΠΌΠ΅Ρ‚ΠΎΠ΄Π°ΠΌΠΈ матСматичСской статистики – посрСдством Π°Π½Π°Π»ΠΈΠ·Π° достовСрности Ρ€Π°Π·Π»ΠΈΡ‡ΠΈΠΉ матСматичСских ΠΎΠΆΠΈΠ΄Π°Π½ΠΈΠΉ ΠΈ ΠΏΡ€ΠΎΠ²Π΅Ρ€ΠΊΠΈ Π³ΠΈΠΏΠΎΡ‚Π΅Π· Π½Π° основС критСрия согласия.Π Π΅Π·ΡƒΠ»ΡŒΡ‚Π°Ρ‚Ρ‹ ΠΈ научная Π½ΠΎΠ²ΠΈΠ·Π½Π°. Описанная Π² ΡΡ‚Π°Ρ‚ΡŒΠ΅ модСль содСрТит Π½Π°Π±ΠΎΡ€ ΠΊΠ»ΡŽΡ‡Π΅Π²Ρ‹Ρ… качСств, ΠΎΠ±Π΅ΡΠΏΠ΅Ρ‡ΠΈΠ²Π°ΡŽΡ‰ΠΈΡ… ΠΏΡ€Π΅ΠΏΠΎΠ΄Π°Π²Π°Ρ‚Π΅Π»ΡŽ ΡƒΡΠΏΠ΅ΡˆΠ½ΠΎΠ΅ достиТСниС стратСгичСских ΠΎΠ±Ρ€Π°Π·ΠΎΠ²Π°Ρ‚Π΅Π»ΡŒΠ½Ρ‹Ρ… Ρ†Π΅Π»Π΅ΠΉ. Π‘Ρ‚Ρ€ΡƒΠΊΡ‚ΡƒΡ€Π° ΠΌΠΎΠ΄Π΅Π»ΠΈ Π²ΠΊΠ»ΡŽΡ‡Π°Π΅Ρ‚ кластСры ΡƒΠ½ΠΈΠ²Π΅Ρ€ΡΠ°Π»ΡŒΠ½Ρ‹Ρ…, ΠΎΠ±Ρ‰Π΅ΠΏΡ€ΠΎΡ„Π΅ΡΡΠΈΠΎΠ½Π°Π»ΡŒΠ½Ρ‹Ρ… ΠΈ ΠΏΡ€ΠΎΡ„Π΅ΡΡΠΈΠΎΠ½Π°Π»ΡŒΠ½Ρ‹Ρ… ΠΊΠΎΠΌΠΏΠ΅Ρ‚Π΅Π½Ρ†ΠΈΠΉ; ΠΈΡ… ΠΊΠ°Ρ€Ρ‚Ρ‹ ΠΈ ΠΈΠ½Π΄ΠΈΠΊΠ°Ρ‚ΠΎΡ€Ρ‹, распрСдСлСнныС ΠΏΠΎ Ρ‚Ρ€Π΅ΠΌ уровням – ΠΌΠΎΠ½ΠΎΠΏΡ€Π΅Π΄ΠΌΠ΅Ρ‚Π½ΠΎΠΌΡƒ, ΠΏΠΎΠ»ΠΈΠΏΡ€Π΅Π΄ΠΌΠ΅Ρ‚Π½ΠΎΠΌΡƒ ΠΈ ΠΌΠ΅Ρ‚Π°ΠΏΡ€Π΅Π΄ΠΌΠ΅Ρ‚Π½ΠΎΠΌΡƒ. Достоинство ΠΌΠΎΠ΄Π΅Π»ΠΈ состоит Π² Ρ‚ΠΎΠΌ, Ρ‡Ρ‚ΠΎ ΠΎΠ½Π° ΠΌΠΎΠΆΠ΅Ρ‚ ΡΠ»ΡƒΠΆΠΈΡ‚ΡŒ ΠΊΠ°ΠΊ ΠΌΠ°Ρ‚Ρ€ΠΈΡ†Π΅ΠΉ для ΠΎΠ±ΡŠΠ΅ΠΊΡ‚ΠΈΠ²Π½ΠΎΠΉ ΠΎΡ†Π΅Π½ΠΊΠΈ профСссионализма ΠΏΡ€Π΅ΠΏΠΎΠ΄Π°Π²Π°Ρ‚Π΅Π»Π΅ΠΉ Π”ΠŸΠž, Ρ‚Π°ΠΊ ΠΈ Π½ΠΎΡ€ΠΌΠ°Ρ‚ΠΈΠ²Π½ΠΎΠΉ Ρ€Π°ΠΌΠΊΠΎΠΉ ΠΏΠΎΠ²Ρ‹ΡˆΠ΅Π½ΠΈΡ ΠΈΡ… ΠΊΠ²Π°Π»ΠΈΡ„ΠΈΠΊΠ°Ρ†ΠΈΠΈ ΠΈ стимулирования саморазвития. Авторами ΡΡ‚Π°Ρ‚ΡŒΠΈ Π±Ρ‹Π» ΠΏΡ€ΠΎΠ²Π΅Π΄Π΅Π½ ΠΏΡ€ΠΎΠ΅ΠΊΡ‚Π½Ρ‹ΠΉ экспСримСнт, Π² Ρ…ΠΎΠ΄Π΅ ΠΊΠΎΡ‚ΠΎΡ€ΠΎΠ³ΠΎ ΠΏΡ€ΠΎΠ²Π΅Ρ€ΡΠ»Π°ΡΡŒ Π³ΠΈΠΏΠΎΡ‚Π΅Π·Π° ΠΎ Π²Ρ‹Π΄Π΅Π»Π΅Π½Π½Ρ‹Ρ… условиях Ρ€Π΅Π°Π»ΠΈΠ·Π°Ρ†ΠΈΠΈ ΠΌΠΎΠ΄Π΅Π»ΠΈ: ΡΠΎΠ΄Π΅Ρ€ΠΆΠ°Ρ‚Π΅Π»ΡŒΠ½ΠΎ-Π΄Π΅ΡΡ‚Π΅Π»ΡŒΠ½ΠΎΡΡ‚Π½Ρ‹Ρ…, ΠΎΡ€Π³Π°Π½ΠΈΠ·Π°Ρ†ΠΈΠΎΠ½Π½ΠΎ-управлСнчСских ΠΈ возмоТности ΠΈΡ… ΠΈΠ½Ρ‚Π΅Π³Ρ€Π°Ρ†ΠΈΠΈ для ΠΏΡ€ΠΎΡ„Π΅ΡΡΠΈΠΎΠ½Π°Π»ΡŒΠ½ΠΎΠ³ΠΎ развития прСподаватСля Π”ΠŸΠž. ОбслСдованиС компСтСнтности ΠΏΠ΅Π΄Π°Π³ΠΎΠ³ΠΎΠ² Π½Π° Β«Π²Ρ…ΠΎΠ΄Π΅Β» ΠΈ Β«Π²Ρ‹Ρ…ΠΎΠ΄Π΅Β» Ρ‚Ρ€Π΅Ρ…Π»Π΅Ρ‚Π½Π΅Π³ΠΎ Π²Π½ΡƒΡ‚Ρ€ΠΈΠΊΠΎΡ€ΠΏΠΎΡ€Π°Ρ‚ΠΈΠ²Π½ΠΎΠ³ΠΎ обучСния ΠΏΠΎ ΠΏΡ€ΠΎΠ³Ρ€Π°ΠΌΠΌΠ°ΠΌ ΠΊΡƒΡ€Ρ€ΠΈΠΊΡƒΠ»ΡƒΠΌΠ° «АндрагогичСская школа событийного образования» ΠΏΠΎΠΊΠ°Π·Π°Π»ΠΎ ΡΡ„Ρ„Π΅ΠΊΡ‚ΠΈΠ²Π½ΠΎΡΡ‚ΡŒ примСнСния Ρ€Π°Π·Ρ€Π°Π±ΠΎΡ‚Π°Π½Π½ΠΎΠΉ ΠΌΠΎΠ΄Π΅Π»ΠΈ Π² Ρ„ΠΎΡ€ΠΌΠ°Ρ‚Π΅ ΡΠ°ΠΌΠΎΠΎΠ±ΡƒΡ‡Π°ΡŽΡ‰Π΅ΠΉΡΡ ΠΎΡ€Π³Π°Π½ΠΈΠ·Π°Ρ†ΠΈΠΈ. ΠŸΡ€Π°ΠΊΡ‚ΠΈΡ‡Π΅ΡΠΊΠ°Ρ Π·Π½Π°Ρ‡ΠΈΠΌΠΎΡΡ‚ΡŒ. Нормативно-компСтСнтностная модСль ΡƒΠ½ΠΈΠ²Π΅Ρ€ΡΠ°Π»ΡŒΠ½Π° ΠΈ ΠΏΠΎΠ»Π½ΠΎΡΡ‚ΡŒΡŽ соотвСтствуСт трСбованиям развития систСмы ΠΏΠΎΠ²Ρ‹ΡˆΠ΅Π½ΠΈΡ ΠΊΠ²Π°Π»ΠΈΡ„ΠΈΠΊΠ°Ρ†ΠΈΠΈ пСдагогичСских Ρ€Π°Π±ΠΎΡ‚Π½ΠΈΠΊΠΎΠ². МодСль Π·Π°ΠΊΠ»Π°Π΄Ρ‹Π²Π°Π΅Ρ‚ ΠΌΠ΅Ρ‚ΠΎΠ΄ΠΎΠ»ΠΎΠ³ΠΈΡ‡Π΅ΡΠΊΡƒΡŽ основу ΠΏΡ€ΠΎΠ΄ΡƒΠΊΡ‚ΠΈΠ²Π½ΠΎΠΉ Π½Π°ΡƒΡ‡Π½ΠΎ-ΠΎΠ±Ρ€Π°Π·ΠΎΠ²Π°Ρ‚Π΅Π»ΡŒΠ½ΠΎΠΉ Π΄Π΅ΡΡ‚Π΅Π»ΡŒΠ½ΠΎΡΡ‚ΠΈ прСподаватСля Π”ΠŸΠž ΠΈ ΠΌΠΎΠΆΠ΅Ρ‚ Π±Ρ‹Ρ‚ΡŒ распространСна Π½Π° всСх, ΠΊΡ‚ΠΎ занимаСтся Π½Π΅ΠΏΡ€Π΅Ρ€Ρ‹Π²Π½Ρ‹ΠΌ пСдагогичСским ΠΎΠ±Ρ€Π°Π·ΠΎΠ²Π°Π½ΠΈΠ΅ΠΌ

    Effects of Turbulent Mixing on the Critical Behavior

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    Effects of strongly anisotropic turbulent mixing on the critical behavior are studied by means of the renormalization group. Two models are considered: the equilibrium model A, which describes purely relaxational dynamics of a nonconserved scalar order parameter, and the Gribov model, which describes the nonequilibrium phase transition between the absorbing and fluctuating states in a reaction-diffusion system. The velocity is modelled by the d-dimensional generalization of the random shear flow introduced by Avellaneda and Majda within the context of passive scalar advection. Existence of new nonequilibrium types of critical regimes (universality classes) is established.Comment: Talk given in the International Bogolyubov Conference "Problems of Theoretical and Mathematical Physics" (Moscow-Dubna, 21-27 August 2009

    A compendium of human genes regulating feeding behavior and body weight, its functional characterization and identification of GWAS genes involved in brain-specific PPI network

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    BACKGROUND: Obesity is heritable. It predisposes to many diseases. The objectives of this study were to create a compendium of genes relevant to feeding behavior (FB) and/or body weight (BW) regulation; to construct and to analyze networks formed by associations between genes/proteins; and to identify the most significant genes, biological processes/pathways, and tissues/organs involved in BW regulation. RESULTS: The compendium of genes controlling FB or BW includes 578 human genes. Candidate genes were identified from various sources, including previously published original research and review articles, GWAS meta-analyses, and OMIM (Online Mendelian Inheritance in Man). All genes were ranked according to knowledge about their biological role in body weight regulation and classified according to expression patterns or functional characteristics. Substantial and overrepresented numbers of genes from the compendium encoded cell surface receptors, signaling molecules (hormones, neuropeptides, cytokines), transcription factors, signal transduction proteins, cilium and BBSome components, and lipid binding proteins or were present in the brain-specific list of tissue-enriched genes identified with TSEA tool. We identified 27 pathways from KEGG, REACTOME and BIOCARTA whose genes were overrepresented in the compendium. Networks formed by physical interactions or homological relationships between proteins or interactions between proteins involved in biochemical/signaling pathways were reconstructed and analyzed. Subnetworks and clusters identified by the MCODE tool included genes/proteins associated with cilium morphogenesis, signal transduction proteins (particularly, G protein-coupled receptors, kinases or proteins involved in response to insulin stimulus) and transcription regulation (particularly nuclear receptors). We ranked GWAS genes according to the number of neighbors in three networks and revealed 22 GWAS genes involved in the brain-specific PPI network. On the base of the most reliable PPIs functioning in the brain tissue, new regulatory schemes interpreting relevance to BW regulation are proposed for three GWAS genes (ETV5, LRP1B, and NDUFS3). CONCLUSIONS: A compendium comprising 578 human genes controlling FB or BW was designed, and the most significant functional groups of genes, biological processes/pathways, and tissues/organs involved in BW regulation were revealed. We ranked genes from the GWAS meta-analysis set according to the number and quality of associations in the networks and then according to their involvement in the brain-specific PPI network and proposed new regulatory schemes involving three GWAS genes (ETV5, LRP1B, and NDUFS3) in BW regulation. The compendium is expected to be useful for pathology risk estimation and for design of new pharmacological approaches in the treatment of human obesity

    Disease-associated genetic variants in the regulatory regions of human genes: mechanisms of action on transcription and genomic resources for dissecting these mechanisms

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    Whole genome and whole exome sequencing technologies play a very important role in the studies of the genetic aspects of the pathogenesis of various diseases. The ample use of genome-wide and exome-wide association study methodology (GWAS and EWAS) made it possible to identify a large number of genetic variants associated with diseases. This information is accumulated in the databases like GWAS central, GWAS catalog, OMIM, ClinVar, etc. Most of the variants identified by the GWAS technique are located in the noncoding regions of the human genome. According to the ENCODE project, the fraction of regions in the human genome potentially involved in transcriptional control is many times greater than the fraction of coding regions. Thus, genetic variation in noncoding regions of the genome can increase the susceptibility to diseases by disrupting various regulatory elements (promoters, enhancers, silencers, insulator regions, etc.). However, identification of the mechanisms of influence of pathogenic genetic variants on the diseases risk is difficult due to a wide variety of regulatory elements. The present review focuses on the molecular genetic mechanisms by which pathogenic genetic variants affect gene expression. At the same time, attention is concentrated on the transcriptional level of regulation as an initial step in the expression of any gene. A triggering event mediating the effect of a pathogenic genetic variant on the level of gene expression can be, for example, a change in the functional activity of transcription factor binding sites (TFBSs) or DNA methylation change, which, in turn, affects the functional activity of promoters or enhancers. Dissecting the regulatory roles of polymorphic loci have been impossible without close integration of modern experimental approaches with computer analysis of a growing wealth of genetic and biological data obtained using omics technologies. The review provides a brief description of a number of the most well-known public genomic information resources containing data obtained using omics technologies, including (1) resources that accumulate data on the chromatin states and the regions of transcription factor binding derived from ChIP-seq experiments; (2) resources containing data on genomic loci, for which allele-specific transcription factor binding was revealed based on ChIP-seq technology; (3) resources containing in silico predicted data on the potential impact of genetic variants on the transcription factor binding sites

    Online resources on gene networks containing human andΒ animal data

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    Gene networks are molecular genetic systems that ensure the formation of phenotypic characteristics of organisms (molecular, biochemical, structural, morphological, behavioral, etc.) based onΒ  information encoded in their genomes. Reconstruction of gene networks provides a methodological basis for modern systems biology. In this regard, the information on the structural and functional organization of gene networks accumulated in modern databases is extremely valuable. This review characterizes a number of Internetaccessible information resources oriented to humans and animals and containing data on gene networks and their functional modules. Without pretending to fully cover all information resources containing data related to humans and animals on the subject, the current review was created to report the current status of the problem and to present the criteria according to which we propose to evaluate the utility of webresources for specific research tasks. On this basis, we compiled and characterized a collection of databases containing information on metabolic and signaling pathways, as well as pathways of regulation of biological processes at the cellular and organismal levels. In addition, we observed the characteristics of several wellΒ­known databases containing data on interactions between biomolecules of various types. The following characteristics of databases were considered: (1) the types of information accumulated in the databases; (2) methods of data presentation; (3) methods of data collection; (4) data sources; (5) special search tools and options for data analysis. A comparison of the above characteristics showed that the databases are very heterogeneous according to their scopes, sources and types of data, interfaces, as well as according to their search options and data analysis tools. It was concluded that at the first step of the gene network reconstruction it is important to form a full set of information resources from which the data can be obtained. The web portals accumulating information about the databases that may be useful for the reconstruction and analysis of gene networks are specified

    Ongoing recombination in SARS-CoV-2 revealed through genealogical reconstruction

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    The evolutionary process of genetic recombination has the potential to rapidly change the properties of a viral pathogen, and its presence is a crucial factor to consider in the development of treatments and vaccines. It can also significantly affect the results of phylogenetic analyses and the inference of evolutionary rates. The detection of recombination from samples of sequencing data is a very challenging problem and is further complicated for SARS-CoV-2 by its relatively slow accumulation of genetic diversity. The extent to which recombination is ongoing for SARS-CoV-2 is not yet resolved. To address this, we use a parsimony-based method to reconstruct possible genealogical histories for samples of SARS-CoV-2 sequences, which enables us to pinpoint specific recombination events that could have generated the data. We propose a statistical framework for disentangling the effects of recurrent mutation from recombination in the history of a sample, and hence provide a way of estimating the probability that ongoing recombination is present. We apply this to samples of sequencing data collected in England and South Africa and find evidence of ongoing recombination
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