Thermal recall: Memory-assisted Markovian thermal processes

We develop a resource-theoretic framework that allows one to bridge the gap between two approaches to quantum thermodynamics based on Markovian thermal processes (which model memoryless dynamics) and thermal operations (which model arbitrarily non-Markovian dynamics). Our approach is built on the notion of memory-assisted Markovian thermal processes, where memoryless thermodynamic processes are promoted to non-Markovianity by explicitly modelling ancillary memory systems initialised in thermal equilibrium states. Within this setting, we propose a family of protocols composed of sequences of elementary two-level thermalisations that approximate all transitions between energy-incoherent states accessible via thermal operations. We prove that, as the size of the memory increases, these approximations become arbitrarily good for all transitions in the infinite temperature limit, and for a subset of transitions in the finite temperature regime. Furthermore, we present solid numerical evidence for the convergence of our protocol to any transition at finite temperatures. We also explain how our framework can be used to quantify the role played by memory effects in thermodynamic protocols such as work extraction. Finally, our results show that elementary control over two energy levels at a given time is sufficient to generate all energy-incoherent transitions accessible via thermal operations if one allows for ancillary thermal systems.Comment: 20 pages, 14 figures. Substantially extended results with new sections and application. Published versio

Small-scale demonstration of nonthermal plasma VOC treatment at Tinker AFB

Nonthermal plasma (NTP) technology is a promising candidate for the treatment of air pollutants. An NTP is different from a thermal plasma in that high energy electrons are used to create chemically active species without raising the gas to high temperatures. NTPs have the potential of simultaneous removal of multiple air pollutants with better control over treatment byproducts. A silent discharge plasma (SDP) configuration is one method of easily generating such a nonthermal plasma. Silent electrical discharge plasma (dielectric barrier) reactors can decompose gas-phase pollutants by free-radical attack or electron-induced fragmentation. The radicals or electrons are produced by the large average volume nonthermal plasmas generated in the reactor. In the past decade, the barrier configuration has attracted attention for destroying toxic chemical agents for the military, removing harmful greenhouse gases (oxides of sulfur and nitrogen - SO{sub x} and NO{sub x}), and treating other environmentally-hazardous chemical compounds (hydrocarbons, chlorocarbons, and chlorofluorocarbons). At the Los Alamos National Laboratory (LANL), the authors have been studying the silent discharge plasma for processing gaseous-based hazardous chemicals for approximately five years. The key objective is to convert hazardous or toxic chemicals into non-hazardous compounds or into materials which are more easily managed. The main applications have been for treating off-gases from thermal treatment units (e.g., incinerators, high-temperature packed bed reactors, arc melters; low-temperature thermal desorbers), and for abating hazardous air-pollutant emissions (e.g., industrial air emissions, vapors extracted from contaminated soil or groundwater)

Numerical implementation of a state variable model for friction

A general state variable model for friction has been incorporated into a finite element code for viscoplasticity. A contact area evolution model is used in a finite element model of a sheet forming friction test. The results show that a state variable model can be used to capture complex friction behavior in metal forming simulations. It is proposed that simulations can play an important role in the analysis of friction experiments and the development of friction models

Hierarchical Equations of Motion Approach to Quantum Thermodynamics

We present a theoretical framework to investigate quantum thermodynamic processes under non-Markovian system-bath interactions on the basis of the hierarchical equations of motion (HEOM) approach, which is convenient to carry out numerically "exact" calculations. This formalism is valuable because it can be used to treat not only strong system-bath coupling but also system-bath correlation or entanglement, which will be essential to characterize the heat transport between the system and quantum heat baths. Using this formalism, we demonstrated an importance of the thermodynamic effect from the tri-partite correlations (TPC) for a two-level heat transfer model and a three-level autonomous heat engine model under the conditions that the conventional quantum master equation approaches are failed. Our numerical calculations show that TPC contributions, which distinguish the heat current from the energy current, have to be take into account to satisfy the thermodynamic laws.Comment: 9 pages, 4 figures. As a chapter of: F. Binder, L. A. Correa, C. Gogolin, J. Anders, and G. Adesso (eds.), "Thermodynamics in the quantum regime - Recent Progress and Outlook", (Springer International Publishing

Intracellular Drug Concentrations and Transporters: Measurement, Modeling, and Implications for the Liver

Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/109769/1/cptclpt201378.pd

PKCθ Regulates T Cell Motility via Ezrin-Radixin-Moesin Localization to the Uropod

Cell motility is a fundamental process crucial for function in many cell types, including T cells. T cell motility is critical for T cell-mediated immune responses, including initiation, activation, and effector function. While many extracellular receptors and cytoskeletal regulators have been shown to control T cell migration, relatively few signaling mediators have been identified that can modulate T cell motility. In this study, we find a previously unknown role for PKCθ in regulating T cell migration to lymph nodes. PKCθ localizes to the migrating T cell uropod and regulates localization of the MTOC, CD43 and ERM proteins to the uropod. Furthermore, PKCθ-deficient T cells are less responsive to chemokine induced migration and are defective in migration to lymph nodes. Our results reveal a novel role for PKCθ in regulating T cell migration and demonstrate that PKCθ signals downstream of CCR7 to regulate protein localization and uropod formation.</p

Advanced oxidation technologies for chemical demilitarization

This is the final report of a one-year, Laboratory-Directed Research and Development (LDRD) project at the Los Alamos National Laboratory. The main project objective was to establish a technical basis for future program development in the area of chemical warfare agent destruction using a Los Alamos-developed advanced oxidation process: a two-stage device consisting of thermal packed-bed reactor (PBR) and a nonthermal plasma (NTP) reactor. Various compounds were evaluated as potential surrogates for chemical warfare (CW) agents. Representative effluent mass balances were projected for future comparisons with incinerators. The design and construction of lab-scale PBR/NTP reactors (consisting of a liquid injection and metering system, electric furnace, condensers, chemical traps, plasma reactors, power supplies, and chemical diagnostics) has been completed. This equipment, the experience gained from chemical-processing experiments, process modeling, and an initial demonstration of the feasibility of closed-loop operation, have provided a technical basis for further demonstrations and program development efforts

Mapping an atlas of tissue-specific drosophila melanogaster metabolomes by high resolution mass spectrometry

Metabolomics can provide exciting insights into organismal function, but most work on simple models has focussed on the whole organism metabolome, so missing the contributions of individual tissues. Comprehensive metabolite profiles for ten tissues from adult Drosophila melanogaster were obtained here by two chromatographic methods, a hydrophilic interaction (HILIC) method for polar metabolites and a lipid profiling method also based on HILIC, in combination with an Orbitrap Exactive instrument. Two hundred and forty two polar metabolites were putatively identified in the various tissues, and 251 lipids were observed in positive ion mode and 61 in negative ion mode. Although many metabolites were detected in all tissues, every tissue showed characteristically abundant metabolites which could be rationalised against specific tissue functions. For example, the cuticle contained high levels of glutathione, reflecting a role in oxidative defence; the alimentary canal (like vertebrate gut) had high levels of acylcarnitines for fatty acid metabolism, and the head contained high levels of ether lipids. The male accessory gland uniquely contained decarboxylated S-adenosylmethionine. These data thus both provide valuable insights into tissue function, and a reference baseline, compatible with the FlyAtlas.org transcriptomic resource, for further metabolomic analysis of this important model organism, for example in the modelling of human inborn errors of metabolism, aging or metabolic imbalances such as diabetes

The Phylogenetic Structure of Reptile, Avian and Uropathogenic Escherichia coli with Particular Reference to Extraintestinal Pathotypes

The impact of the Gram-negative bacterium Escherichia coli (E. coli) on the microbiomic and pathogenic phenomena occurring in humans and other warm-blooded animals is relatively well-recognized. At the same time, there are scant data concerning the role of E. coli strains in the health and disease of cold-blooded animals. It is presently known that reptiles are common asymptomatic carriers of another human pathogen, Salmonella, which, when transferred to humans, may cause a disease referred to as reptile-associated salmonellosis (RAS). We therefore hypothesized that reptiles may also be carriers of specific E. coli strains (reptilian Escherichia coli, RepEC) which may differ in their genetic composition from the human uropathogenic strain (UPEC) and avian pathogenic E. coli (APEC). Therefore, we isolated RepECs (n = 24) from reptile feces and compared isolated strains’ pathogenic potentials and phylogenic relations with the aforementioned UPEC (n = 24) and APEC (n = 24) strains. To this end, we conducted an array of molecular analyses, including determination of the phylogenetic groups of E. coli, virulence genotyping, Pulsed-Field Gel Electrophoresis-Restriction Analysis (RA-PFGE) and genetic population structure analysis using Multi-Locus Sequence Typing (MLST). The majority of the tested RepEC strains belonged to nonpathogenic phylogroups, with an important exception of one strain, which belonged to the pathogenic group B2, typical of extraintestinal pathogenic E. coli. This strain was part of the globally disseminated ST131 lineage. Unlike RepEC strains and in line with previous studies, a high percentage of UPEC strains belonged to the phylogroup B2, and the percentage distribution of phylogroups among the tested APEC strains was relatively homogenous, with most coming from the following nonpathogenic groups: C, A and B1. The RA-PFGE displayed a high genetic diversity among all the tested E. coli groups. In the case of RepEC strains, the frequency of occurrence of virulence genes (VGs) was lower than in the UPEC and APEC strains. The presented study is one of the first attempting to compare the phylogenetic structures of E. coli populations isolated from three groups of vertebrates: reptiles, birds and mammals (humans).</jats:p