The deal.II Library, Version 9.0

This paper provides an overview of the new features of the finite element library deal.II version 9.0

Dual weighted residual based error control for nonstationary convection-dominated equations: potential or ballast?

Even though substantial progress has been made in the numerical approximation of convection-dominated problems, its major challenges remain in the scope of current research. In particular, parameter robust a posteriori error estimates for quantities of physical interest and adaptive mesh refinement strategies with proved convergence are still missing. Here, we study numerically the potential of the Dual Weighted Residual (DWR) approach applied to stabilized finite element methods to further enhance the quality of approximations. The impact of a strict application of the DWR methodology is particularly focused rather than the reduction of computational costs for solving the dual problem by interpolation or localization.Comment: arXiv admin note: text overlap with arXiv:1803.1064

A computational framework for the morpho-elastic development of molluskan shells by surface and volume growth

Mollusk shells are an ideal model system for understanding the morpho-elastic basis of morphological evolution of invertebrates' exoskeletons. During the formation of the shell, the mantle tissue secretes proteins and minerals that calcify to form a new incremental layer of the exoskeleton. Most of the existing literature on the morphology of mollusks is descriptive. The mathematical understanding of the underlying coupling between pre-existing shell morphology, de novo surface deposition and morpho-elastic volume growth is at a nascent stage, primarily limited to reduced geometric representations. Here, we propose a general, three-dimensional computational framework coupling pre-existing morphology, incremental surface growth by accretion, and morpho-elastic volume growth. We exercise this framework by applying it to explain the stepwise morphogenesis of seashells during growth: new material surfaces are laid down by accretive growth on the mantle whose form is determined by its morpho-elastic growth. Calcification of the newest surfaces extends the shell as well as creates a new scaffold that constrains the next growth step. We study the effects of surface and volumetric growth rates, and of previously deposited shell geometries on the resulting modes of mantle deformation, and therefore of the developing shell's morphology. Connections are made to a range of complex shells ornamentations.Comment: Main article is 20 pages long with 15 figures. Supplementary material is 4 pages long with 6 figures and 6 attached movies. To be published in PLOS Computational Biolog