Balanced Families of Perfect Hash Functions and Their Applications

The construction of perfect hash functions is a well-studied topic. In this paper, this concept is generalized with the following definition. We say that a family of functions from $[n]$ to $[k]$ is a $\delta$-balanced $(n,k)$-family of perfect hash functions if for every $S \subseteq [n]$, $|S|=k$, the number of functions that are 1-1 on $S$ is between $T/\delta$ and $\delta T$ for some constant $T>0$. The standard definition of a family of perfect hash functions requires that there will be at least one function that is 1-1 on $S$, for each $S$ of size $k$. In the new notion of balanced families, we require the number of 1-1 functions to be almost the same (taking $\delta$ to be close to 1) for every such $S$. Our main result is that for any constant $\delta > 1$, a $\delta$-balanced $(n,k)$-family of perfect hash functions of size $2^{O(k \log \log k)} \log n$ can be constructed in time $2^{O(k \log \log k)} n \log n$. Using the technique of color-coding we can apply our explicit constructions to devise approximation algorithms for various counting problems in graphs. In particular, we exhibit a deterministic polynomial time algorithm for approximating both the number of simple paths of length $k$ and the number of simple cycles of size $k$ for any $k \leq O(\frac{\log n}{\log \log \log n})$ in a graph with $n$ vertices. The approximation is up to any fixed desirable relative error

Exponential Time Complexity of the Permanent and the Tutte Polynomial

We show conditional lower bounds for well-studied #P-hard problems: (a) The number of satisfying assignments of a 2-CNF formula with n variables cannot be counted in time exp(o(n)), and the same is true for computing the number of all independent sets in an n-vertex graph. (b) The permanent of an n x n matrix with entries 0 and 1 cannot be computed in time exp(o(n)). (c) The Tutte polynomial of an n-vertex multigraph cannot be computed in time exp(o(n)) at most evaluation points (x,y) in the case of multigraphs, and it cannot be computed in time exp(o(n/polylog n)) in the case of simple graphs. Our lower bounds are relative to (variants of) the Exponential Time Hypothesis (ETH), which says that the satisfiability of n-variable 3-CNF formulas cannot be decided in time exp(o(n)). We relax this hypothesis by introducing its counting version #ETH, namely that the satisfying assignments cannot be counted in time exp(o(n)). In order to use #ETH for our lower bounds, we transfer the sparsification lemma for d-CNF formulas to the counting setting

A Message-Passing Algorithm for Counting Short Cycles in a Graph

A message-passing algorithm for counting short cycles in a graph is presented. For bipartite graphs, which are of particular interest in coding, the algorithm is capable of counting cycles of length g, g +2,..., 2g - 2, where g is the girth of the graph. For a general (non-bipartite) graph, cycles of length g; g + 1, ..., 2g - 1 can be counted. The algorithm is based on performing integer additions and subtractions in the nodes of the graph and passing extrinsic messages to adjacent nodes. The complexity of the proposed algorithm grows as $O(g|E|^2)$, where $|E|$ is the number of edges in the graph. For sparse graphs, the proposed algorithm significantly outperforms the existing algorithms in terms of computational complexity and memory requirements.Comment: Submitted to IEEE Trans. Inform. Theory, April 21, 2010

Finding and counting vertex-colored subtrees

The problems studied in this article originate from the Graph Motif problem introduced by Lacroix et al. in the context of biological networks. The problem is to decide if a vertex-colored graph has a connected subgraph whose colors equal a given multiset of colors $M$. It is a graph pattern-matching problem variant, where the structure of the occurrence of the pattern is not of interest but the only requirement is the connectedness. Using an algebraic framework recently introduced by Koutis et al., we obtain new FPT algorithms for Graph Motif and variants, with improved running times. We also obtain results on the counting versions of this problem, proving that the counting problem is FPT if M is a set, but becomes W[1]-hard if M is a multiset with two colors. Finally, we present an experimental evaluation of this approach on real datasets, showing that its performance compares favorably with existing software.Comment: Conference version in International Symposium on Mathematical Foundations of Computer Science (MFCS), Brno : Czech Republic (2010) Journal Version in Algorithmic

Approximate Counting CSP Seen from the Other Side

In this paper we study the complexity of counting Constraint Satisfaction Problems (CSPs) of the form #CSP(C,-), in which the goal is, given a relational structure A from a class C of structures and an arbitrary structure B, to find the number of homomorphisms from A to B. Flum and Grohe showed that #CSP(C,-) is solvable in polynomial time if C has bounded treewidth [FOCS\u2702]. Building on the work of Grohe [JACM\u2707] on decision CSPs, Dalmau and Jonsson then showed that, if C is a recursively enumerable class of relational structures of bounded arity, then assuming FPT != #W[1], there are no other cases of #CSP(C,-) solvable exactly in polynomial time (or even fixed-parameter time) [TCS\u2704]. We show that, assuming FPT != W[1] (under randomised parametrised reductions) and for C satisfying certain general conditions, #CSP(C,-) is not solvable even approximately for C of unbounded treewidth; that is, there is no fixed parameter tractable (and thus also not fully polynomial) randomised approximation scheme for #CSP(C,-). In particular, our condition generalises the case when C is closed under taking minors

Dichotomy Results for Fixed Point Counting in Boolean Dynamical Systems

We present dichotomy theorems regarding the computational complexity of counting fixed points in boolean (discrete) dynamical systems, i.e., finite discrete dynamical systems over the domain {0,1}. For a class F of boolean functions and a class G of graphs, an (F,G)-system is a boolean dynamical system with local transitions functions lying in F and graphs in G. We show that, if local transition functions are given by lookup tables, then the following complexity classification holds: Let F be a class of boolean functions closed under superposition and let G be a graph class closed under taking minors. If F contains all min-functions, all max-functions, or all self-dual and monotone functions, and G contains all planar graphs, then it is #P-complete to compute the number of fixed points in an (F,G)-system; otherwise it is computable in polynomial time. We also prove a dichotomy theorem for the case that local transition functions are given by formulas (over logical bases). This theorem has a significantly more complicated structure than the theorem for lookup tables. A corresponding theorem for boolean circuits coincides with the theorem for formulas.Comment: 16 pages, extended abstract presented at 10th Italian Conference on Theoretical Computer Science (ICTCS'2007

Pareto Optimal Allocation under Uncertain Preferences

The assignment problem is one of the most well-studied settings in social choice, matching, and discrete allocation. We consider the problem with the additional feature that agents' preferences involve uncertainty. The setting with uncertainty leads to a number of interesting questions including the following ones. How to compute an assignment with the highest probability of being Pareto optimal? What is the complexity of computing the probability that a given assignment is Pareto optimal? Does there exist an assignment that is Pareto optimal with probability one? We consider these problems under two natural uncertainty models: (1) the lottery model in which each agent has an independent probability distribution over linear orders and (2) the joint probability model that involves a joint probability distribution over preference profiles. For both of the models, we present a number of algorithmic and complexity results.Comment: Preliminary Draft; new results & new author