THE COMPUTATIONAL COMPLEXITY OF AVOIDING FORBIDDEN SUBMATRICES BY ROW DELETIONS

We initiate a systematic study of the Row Deletion(B) problem on matrices: Given an input matrix A and a fixed “forbidden submatrix” B, the task is to remove a minimum number of rows from A such that no row or column permutation of B occurs as a submatrix in the resulting matrix. An application of this problem can be found, for instance, in the construction of perfect phylogenies. Establishing a strong connection to variants of the NP-complete Hitting Set problem, we describe and analyze structural properties of B that make Row Deletion(B) NP-complete. On the positive side, the close relation with Hitting Set problems yields constant-factor polynomial-time approximation algorithms and fixed-parameter tractability results

Algorithm design techniques for parameterized graph modification problems

Diese Arbeit beschaeftigt sich mit dem Entwurf parametrisierter Algorithmen fuer Graphmodifikationsprobleme wie Feedback Vertex Set, Multicut in Trees, Cluster Editing und Closest 3-Leaf Powers. Anbei wird die Anwendbarkeit von vier Technicken zur Entwicklung parametrisierter Algorithmen, naemlich, Datenreduktion, Suchbaum, Iterative Kompression und Dynamische Programmierung, fuer solche Graphmodifikationsprobleme untersucht