Integrative Dynamic Reconfiguration in a Parallel Stream Processing Engine

Load balancing, operator instance collocations and horizontal scaling are critical issues in Parallel Stream Processing Engines to achieve low data processing latency, optimized cluster utilization and minimized communication cost respectively. In previous work, these issues are typically tackled separately and independently. We argue that these problems are tightly coupled in the sense that they all need to determine the allocations of workloads and migrate computational states at runtime. Optimizing them independently would result in suboptimal solutions. Therefore, in this paper, we investigate how these three issues can be modeled as one integrated optimization problem. In particular, we first consider jobs where workload allocations have little effect on the communication cost, and model the problem of load balance as a Mixed-Integer Linear Program. Afterwards, we present an extended solution called ALBIC, which support general jobs. We implement the proposed techniques on top of Apache Storm, an open-source Parallel Stream Processing Engine. The extensive experimental results over both synthetic and real datasets show that our techniques clearly outperform existing approaches

Metascheduling of HPC Jobs in Day-Ahead Electricity Markets

High performance grid computing is a key enabler of large scale collaborative computational science. With the promise of exascale computing, high performance grid systems are expected to incur electricity bills that grow super-linearly over time. In order to achieve cost effectiveness in these systems, it is essential for the scheduling algorithms to exploit electricity price variations, both in space and time, that are prevalent in the dynamic electricity price markets. In this paper, we present a metascheduling algorithm to optimize the placement of jobs in a compute grid which consumes electricity from the day-ahead wholesale market. We formulate the scheduling problem as a Minimum Cost Maximum Flow problem and leverage queue waiting time and electricity price predictions to accurately estimate the cost of job execution at a system. Using trace based simulation with real and synthetic workload traces, and real electricity price data sets, we demonstrate our approach on two currently operational grids, XSEDE and NorduGrid. Our experimental setup collectively constitute more than 433K processors spread across 58 compute systems in 17 geographically distributed locations. Experiments show that our approach simultaneously optimizes the total electricity cost and the average response time of the grid, without being unfair to users of the local batch systems.Comment: Appears in IEEE Transactions on Parallel and Distributed System

High performance subgraph mining in molecular compounds

Structured data represented in the form of graphs arises in several fields of the science and the growing amount of available data makes distributed graph mining techniques particularly relevant. In this paper, we present a distributed approach to the frequent subgraph mining problem to discover interesting patterns in molecular compounds. The problem is characterized by a highly irregular search tree, whereby no reliable workload prediction is available. We describe the three main aspects of the proposed distributed algorithm, namely a dynamic partitioning of the search space, a distribution process based on a peer-to-peer communication framework, and a novel receiver-initiated, load balancing algorithm. The effectiveness of the distributed method has been evaluated on the well-known National Cancer Institute’s HIV-screening dataset, where the approach attains close-to linear speedup in a network of workstations

LBSim: A simulation system for dynamic load-balancing algorithms for distributed systems.

In a distributed system consisting of autonomous computational units, the total computational power of all the units needs to be utilized efficiently by applying suitable load-balancing policies. For accomplishing the task, a large number of load balancing algorithms have been proposed in the literature. To facilitate the performance study of each of these load-balancing strategies, simulation has been widely used. However comparison of the load balancing algorithms becomes difficult if a different simulator is used for each case. There have been few studies on generalized simulation of load-balancing algorithms in distributed systems. Most of the simulation systems address the experiments for some particular load-balancing algorithms, whereas this thesis aims to study the simulation for a broad range of algorithms. After the characterization of the distributed systems and the extraction of the common components of load-balancing algorithms, a simulation system, called LBSim, has been built. LBSim is a generalized event-driven simulator for studying load-balancing algorithms with coarse-grained applications running on distributed networks of autonomous processing nodes. In order to verify that the simulation model can represent actual systems reasonably well, we have validated LBSim both qualitatively and quantitatively. As a toolkit of simulation, LBSim programming libraries can be reused to implement load-balancing algorithms for the purpose of performance measurement and analysis from different perspectives. As a framework of algorithm simulation can be extended with a moderate effort by following object-oriented methodology, to meet any new requirements that may arise in the future.Dept. of Computer Science. Paper copy at Leddy Library: Theses & Major Papers - Basement, West Bldg. / Call Number: Thesis2004 .D8. Source: Masters Abstracts International, Volume: 43-05, page: 1747. Adviser: A. K. Aggarwal. Thesis (M.Sc.)--University of Windsor (Canada), 2004