16,690 research outputs found
A Deep Cascade of Convolutional Neural Networks for MR Image Reconstruction
The acquisition of Magnetic Resonance Imaging (MRI) is inherently slow.
Inspired by recent advances in deep learning, we propose a framework for
reconstructing MR images from undersampled data using a deep cascade of
convolutional neural networks to accelerate the data acquisition process. We
show that for Cartesian undersampling of 2D cardiac MR images, the proposed
method outperforms the state-of-the-art compressed sensing approaches, such as
dictionary learning-based MRI (DLMRI) reconstruction, in terms of
reconstruction error, perceptual quality and reconstruction speed for both
3-fold and 6-fold undersampling. Compared to DLMRI, the error produced by the
method proposed is approximately twice as small, allowing to preserve
anatomical structures more faithfully. Using our method, each image can be
reconstructed in 23 ms, which is fast enough to enable real-time applications
PVR: Patch-to-Volume Reconstruction for Large Area Motion Correction of Fetal MRI
In this paper we present a novel method for the correction of motion
artifacts that are present in fetal Magnetic Resonance Imaging (MRI) scans of
the whole uterus. Contrary to current slice-to-volume registration (SVR)
methods, requiring an inflexible anatomical enclosure of a single investigated
organ, the proposed patch-to-volume reconstruction (PVR) approach is able to
reconstruct a large field of view of non-rigidly deforming structures. It
relaxes rigid motion assumptions by introducing a specific amount of redundant
information that is exploited with parallelized patch-wise optimization,
super-resolution, and automatic outlier rejection. We further describe and
provide an efficient parallel implementation of PVR allowing its execution
within reasonable time on commercially available graphics processing units
(GPU), enabling its use in the clinical practice. We evaluate PVR's
computational overhead compared to standard methods and observe improved
reconstruction accuracy in presence of affine motion artifacts of approximately
30% compared to conventional SVR in synthetic experiments. Furthermore, we have
evaluated our method qualitatively and quantitatively on real fetal MRI data
subject to maternal breathing and sudden fetal movements. We evaluate
peak-signal-to-noise ratio (PSNR), structural similarity index (SSIM), and
cross correlation (CC) with respect to the originally acquired data and provide
a method for visual inspection of reconstruction uncertainty. With these
experiments we demonstrate successful application of PVR motion compensation to
the whole uterus, the human fetus, and the human placenta.Comment: 10 pages, 13 figures, submitted to IEEE Transactions on Medical
Imaging. v2: wadded funders acknowledgements to preprin
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