936 research outputs found
DSL: Discriminative Subgraph Learning via Sparse Self-Representation
The goal in network state prediction (NSP) is to classify the global state
(label) associated with features embedded in a graph. This graph structure
encoding feature relationships is the key distinctive aspect of NSP compared to
classical supervised learning. NSP arises in various applications: gene
expression samples embedded in a protein-protein interaction (PPI) network,
temporal snapshots of infrastructure or sensor networks, and fMRI coherence
network samples from multiple subjects to name a few. Instances from these
domains are typically ``wide'' (more features than samples), and thus, feature
sub-selection is required for robust and generalizable prediction. How to best
employ the network structure in order to learn succinct connected subgraphs
encompassing the most discriminative features becomes a central challenge in
NSP. Prior work employs connected subgraph sampling or graph smoothing within
optimization frameworks, resulting in either large variance of quality or weak
control over the connectivity of selected subgraphs.
In this work we propose an optimization framework for discriminative subgraph
learning (DSL) which simultaneously enforces (i) sparsity, (ii) connectivity
and (iii) high discriminative power of the resulting subgraphs of features. Our
optimization algorithm is a single-step solution for the NSP and the associated
feature selection problem. It is rooted in the rich literature on
maximal-margin optimization, spectral graph methods and sparse subspace
self-representation. DSL simultaneously ensures solution interpretability and
superior predictive power (up to 16% improvement in challenging instances
compared to baselines), with execution times up to an hour for large instances.Comment: 9 page
Collaborative Representation based Classification for Face Recognition
By coding a query sample as a sparse linear combination of all training
samples and then classifying it by evaluating which class leads to the minimal
coding residual, sparse representation based classification (SRC) leads to
interesting results for robust face recognition. It is widely believed that the
l1- norm sparsity constraint on coding coefficients plays a key role in the
success of SRC, while its use of all training samples to collaboratively
represent the query sample is rather ignored. In this paper we discuss how SRC
works, and show that the collaborative representation mechanism used in SRC is
much more crucial to its success of face classification. The SRC is a special
case of collaborative representation based classification (CRC), which has
various instantiations by applying different norms to the coding residual and
coding coefficient. More specifically, the l1 or l2 norm characterization of
coding residual is related to the robustness of CRC to outlier facial pixels,
while the l1 or l2 norm characterization of coding coefficient is related to
the degree of discrimination of facial features. Extensive experiments were
conducted to verify the face recognition accuracy and efficiency of CRC with
different instantiations.Comment: It is a substantial revision of a previous conference paper (L.
Zhang, M. Yang, et al. "Sparse Representation or Collaborative
Representation: Which Helps Face Recognition?" in ICCV 2011
Decoding Clinical Biomarker Space of COVID-19: Exploring Matrix Factorization-based Feature Selection Methods
One of the most critical challenges in managing complex diseases like COVID-19 is to establish an intelligent triage system that can optimize the clinical decision-making at the time of a global pandemic. The clinical presentation and patients’ characteristics are usually utilized to identify those patients who need more critical care. However, the clinical evidence shows an unmet need to determine more accurate and optimal clinical biomarkers to triage patients under a condition like the COVID-19 crisis. Here we have presented a machine learning approach to find a group of clinical indicators from the blood tests of a set of COVID-19 patients that are predictive of poor prognosis and morbidity. Our approach consists of two interconnected schemes: Feature Selection and Prognosis Classification. The former is based on different Matrix Factorization (MF)-based methods, and the latter is performed using Random Forest algorithm. Our model reveals that Arterial Blood Gas (ABG) O2 Saturation and C-Reactive Protein (CRP) are the most important clinical biomarkers determining the poor prognosis in these patients. Our approach paves the path of building quantitative and optimized clinical management systems for COVID-19 and similar diseases
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