5,389 research outputs found
A Framework for Directional and Higher-Order Reconstruction in Photoacoustic Tomography
Photoacoustic tomography is a hybrid imaging technique that combines high
optical tissue contrast with high ultrasound resolution. Direct reconstruction
methods such as filtered backprojection, time reversal and least squares suffer
from curved line artefacts and blurring, especially in case of limited angles
or strong noise. In recent years, there has been great interest in regularised
iterative methods. These methods employ prior knowledge on the image to provide
higher quality reconstructions. However, easy comparisons between regularisers
and their properties are limited, since many tomography implementations heavily
rely on the specific regulariser chosen. To overcome this bottleneck, we
present a modular reconstruction framework for photoacoustic tomography. It
enables easy comparisons between regularisers with different properties, e.g.
nonlinear, higher-order or directional. We solve the underlying minimisation
problem with an efficient first-order primal-dual algorithm. Convergence rates
are optimised by choosing an operator dependent preconditioning strategy. Our
reconstruction methods are tested on challenging 2D synthetic and experimental
data sets. They outperform direct reconstruction approaches for strong noise
levels and limited angle measurements, offering immediate benefits in terms of
acquisition time and quality. This work provides a basic platform for the
investigation of future advanced regularisation methods in photoacoustic
tomography.Comment: submitted to "Physics in Medicine and Biology". Changes from v1 to
v2: regularisation with directional wavelet has been added; new experimental
tests have been include
Jump-sparse and sparse recovery using Potts functionals
We recover jump-sparse and sparse signals from blurred incomplete data
corrupted by (possibly non-Gaussian) noise using inverse Potts energy
functionals. We obtain analytical results (existence of minimizers, complexity)
on inverse Potts functionals and provide relations to sparsity problems. We
then propose a new optimization method for these functionals which is based on
dynamic programming and the alternating direction method of multipliers (ADMM).
A series of experiments shows that the proposed method yields very satisfactory
jump-sparse and sparse reconstructions, respectively. We highlight the
capability of the method by comparing it with classical and recent approaches
such as TV minimization (jump-sparse signals), orthogonal matching pursuit,
iterative hard thresholding, and iteratively reweighted minimization
(sparse signals)
Accelerated High-Resolution Photoacoustic Tomography via Compressed Sensing
Current 3D photoacoustic tomography (PAT) systems offer either high image
quality or high frame rates but are not able to deliver high spatial and
temporal resolution simultaneously, which limits their ability to image dynamic
processes in living tissue. A particular example is the planar Fabry-Perot (FP)
scanner, which yields high-resolution images but takes several minutes to
sequentially map the photoacoustic field on the sensor plane, point-by-point.
However, as the spatio-temporal complexity of many absorbing tissue structures
is rather low, the data recorded in such a conventional, regularly sampled
fashion is often highly redundant. We demonstrate that combining variational
image reconstruction methods using spatial sparsity constraints with the
development of novel PAT acquisition systems capable of sub-sampling the
acoustic wave field can dramatically increase the acquisition speed while
maintaining a good spatial resolution: First, we describe and model two general
spatial sub-sampling schemes. Then, we discuss how to implement them using the
FP scanner and demonstrate the potential of these novel compressed sensing PAT
devices through simulated data from a realistic numerical phantom and through
measured data from a dynamic experimental phantom as well as from in-vivo
experiments. Our results show that images with good spatial resolution and
contrast can be obtained from highly sub-sampled PAT data if variational image
reconstruction methods that describe the tissues structures with suitable
sparsity-constraints are used. In particular, we examine the use of total
variation regularization enhanced by Bregman iterations. These novel
reconstruction strategies offer new opportunities to dramatically increase the
acquisition speed of PAT scanners that employ point-by-point sequential
scanning as well as reducing the channel count of parallelized schemes that use
detector arrays.Comment: submitted to "Physics in Medicine and Biology
3D Point Capsule Networks
In this paper, we propose 3D point-capsule networks, an auto-encoder designed
to process sparse 3D point clouds while preserving spatial arrangements of the
input data. 3D capsule networks arise as a direct consequence of our novel
unified 3D auto-encoder formulation. Their dynamic routing scheme and the
peculiar 2D latent space deployed by our approach bring in improvements for
several common point cloud-related tasks, such as object classification, object
reconstruction and part segmentation as substantiated by our extensive
evaluations. Moreover, it enables new applications such as part interpolation
and replacement.Comment: As published in CVPR 2019 (camera ready version), with supplementary
materia
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