Collaborative e-science architecture for Reaction Kinetics research community

This paper presents a novel collaborative e-science architecture (CeSA) to address two challenging issues in e-science that arise from the management of heterogeneous distributed environments: (i) how to provide individual scientists an integrated environment to collaborate with each other in distributed, loosely coupled research communities where each member might be using a disparate range of tools; and (ii) how to provide easy access to a range of computationally intensive resources from a desktop. The Reaction Kinetics research community was used to capture the requirements and in the evaluation of the proposed architecture. The result demonstrated the feasibility of the approach and the potential benefits of the CeSA

Personal Volunteer Computing

We propose personal volunteer computing, a novel paradigm to encourage technical solutions that leverage personal devices, such as smartphones and laptops, for personal applications that require significant computations, such as animation rendering and image processing. The paradigm requires no investment in additional hardware, relying instead on devices that are already owned by users and their community, and favours simple tools that can be implemented part-time by a single developer. We show that samples of personal devices of today are competitive with a top-of-the-line laptop from two years ago. We also propose new directions to extend the paradigm

Provenance-based trust for grid computing: Position Paper

Current evolutions of Internet technology such as Web Services, ebXML, peer-to-peer and Grid computing all point to the development of large-scale open networks of diverse computing systems interacting with one another to perform tasks. Grid systems (and Web Services) are exemplary in this respect and are perhaps some of the first large-scale open computing systems to see widespread use - making them an important testing ground for problems in trust management which are likely to arise. From this perspective, today's grid architectures suffer from limitations, such as lack of a mechanism to trace results and lack of infrastructure to build up trust networks. These are important concerns in open grids, in which "community resources" are owned and managed by multiple stakeholders, and are dynamically organised in virtual organisations. Provenance enables users to trace how a particular result has been arrived at by identifying the individual services and the aggregation of services that produced such a particular output. Against this background, we present a research agenda to design, conceive and implement an industrial-strength open provenance architecture for grid systems. We motivate its use with three complex grid applications, namely aerospace engineering, organ transplant management and bioinformatics. Industrial-strength provenance support includes a scalable and secure architecture, an open proposal for standardising the protocols and data structures, a set of tools for configuring and using the provenance architecture, an open source reference implementation, and a deployment and validation in industrial context. The provision of such facilities will enrich grid capabilities by including new functionalities required for solving complex problems such as provenance data to provide complete audit trails of process execution and third-party analysis and auditing. As a result, we anticipate that a larger uptake of grid technology is likely to occur, since unprecedented possibilities will be offered to users and will give them a competitive edge

1st INCF Workshop on Sustainability of Neuroscience Databases

The goal of the workshop was to discuss issues related to the sustainability of neuroscience databases, identify problems and propose solutions, and formulate recommendations to the INCF. The report summarizes the discussions of invited participants from the neuroinformatics community as well as from other disciplines where sustainability issues have already been approached. The recommendations for the INCF involve rating, ranking, and supporting database sustainability

Semantic-Based, Scalable, Decentralized and Dynamic Resource Discovery for Internet-Based Distributed System

Resource Discovery (RD) is a key issue in Internet-based distributed sytems such as grid. RD is about locating an appropriate resource/service type that matches the user's application requirements. This is very important, as resource reservation and task scheduling are based on it. Unfortunately, RD in grid is very challenging as resources and users are distributed, resources are heterogeneous in their platforms, status of the resources is dynamic (resources can join or leave the system without any prior notice) and most recently the introduction of a new type of grid called intergrid (grid of grids) with the use of multi middlewares. Such situation requires an RD system that has rich interoperability, scalability, decentralization and dynamism features. However, existing grid RD systems have difficulties to attain these features. Not only that, they lack the review and evaluation studies, which may highlight the gap in achieving the required features. Therefore, this work discusses the problem associated with intergrid RD from two perspectives. First, reviewing and classifying the current grid RD systems in such a way that may be useful for discussing and comparing them. Second, propose a novel RD framework that has the aforementioned required RD features. In the former, we mainly focus on the studies that aim to achieve interoperability in the first place, which are known as RD systems that use semantic information (semantic technology). In particular, we classify such systems based on their qualitative use of the semantic information. We evaluate the classified studies based on their degree of accomplishment of interoperability and the other RD requirements, and draw the future research direction of this field. Meanwhile in the latter, we name the new framework as semantic-based scalable decentralized dynamic RD. The framework further contains two main components which are service description, and service registration and discovery models. The earlier consists of a set of ontologies and services. Ontologies are used as a data model for service description, whereas the services are to accomplish the description process. The service registration is also based on ontology, where nodes of the service (service providers) are classified to some classes according to the ontology concepts, which means each class represents a concept in the ontology. Each class has a head, which is elected among its own class I nodes/members. Head plays the role of a registry in its class and communicates with I the other heads of the classes in a peer to peer manner during the discovery process. We further introduce two intelligent agents to automate the discovery process which are Request Agent (RA) and Description Agent (DA). Eaclj. node is supposed to have both agents. DA describes the service capabilities based on the ontology, and RA I carries the service requests based on the ontology as well. We design a service search I algorithm for the RA that starts the service look up from the class of request origin first, then to the other classes. We finally evaluate the performance of our framework ~ith extensive simulation experiments, the result of which confirms the effectiveness of the proposed system in satisfying the required RD features (interoperability, scalability, decentralization and dynamism). In short, our main contributions are outlined new key taxonomy for the semantic-based grid RD studies; an interoperable semantic description RD component model for intergrid services metadata representation; a semantic distributed registry architecture for indexing service metadata; and an agent-qased service search and selection algorithm. Vll

Random Approach to Optimization of Overlay Public-Resource Computing Systems

The growing need for computationally demanding systems triggers the development of various network-oriented computing systems organized in a distributed manner. In this work we concentrate on one kind of such systems, i.e. public-resource computing systems. The considered system works on the top of an overlay network and uses personal computers and other relatively simple electronic equipment instead of supercomputers. We assume that two kinds of network flows are used to distribute the data in the public-resource computing systems: unicast and peer-to-peer. We formulate an optimization model of the system. After that we propose random algorithms that optimize jointly the allocation of computational tasks and the distribution of the output data. To evaluate the algorithms we run numerical experiments and present results showing the comparison of the random approach against optimal solutions provided by the CPLEX solver

Data Management in the APPA System

International audienceCombining Grid and P2P technologies can be exploited to provide high-level data sharing in large-scale distributed environments. However, this combination must deal with two hard problems: the scale of the network and the dynamic behavior of the nodes. In this paper, we present our solution in APPA (Atlas Peer-to-Peer Architecture), a data management system with high-level services for building large-scale distributed applications. We focus on data availability and data discovery which are two main requirements for implementing large-scale Grids. We have validated APPA's services through a combination of experimentation over Grid5000, which is a very large Grid experimental platform, and simulation using SimJava. The results show very good performance in terms of communication cost and response time