6,355 research outputs found
Combining Search, Social Media, and Traditional Data Sources to Improve Influenza Surveillance
We present a machine learning-based methodology capable of providing
real-time ("nowcast") and forecast estimates of influenza activity in the US by
leveraging data from multiple data sources including: Google searches, Twitter
microblogs, nearly real-time hospital visit records, and data from a
participatory surveillance system. Our main contribution consists of combining
multiple influenza-like illnesses (ILI) activity estimates, generated
independently with each data source, into a single prediction of ILI utilizing
machine learning ensemble approaches. Our methodology exploits the information
in each data source and produces accurate weekly ILI predictions for up to four
weeks ahead of the release of CDC's ILI reports. We evaluate the predictive
ability of our ensemble approach during the 2013-2014 (retrospective) and
2014-2015 (live) flu seasons for each of the four weekly time horizons. Our
ensemble approach demonstrates several advantages: (1) our ensemble method's
predictions outperform every prediction using each data source independently,
(2) our methodology can produce predictions one week ahead of GFT's real-time
estimates with comparable accuracy, and (3) our two and three week forecast
estimates have comparable accuracy to real-time predictions using an
autoregressive model. Moreover, our results show that considerable insight is
gained from incorporating disparate data streams, in the form of social media
and crowd sourced data, into influenza predictions in all time horizon
Global disease monitoring and forecasting with Wikipedia
Infectious disease is a leading threat to public health, economic stability,
and other key social structures. Efforts to mitigate these impacts depend on
accurate and timely monitoring to measure the risk and progress of disease.
Traditional, biologically-focused monitoring techniques are accurate but costly
and slow; in response, new techniques based on social internet data such as
social media and search queries are emerging. These efforts are promising, but
important challenges in the areas of scientific peer review, breadth of
diseases and countries, and forecasting hamper their operational usefulness.
We examine a freely available, open data source for this use: access logs
from the online encyclopedia Wikipedia. Using linear models, language as a
proxy for location, and a systematic yet simple article selection procedure, we
tested 14 location-disease combinations and demonstrate that these data
feasibly support an approach that overcomes these challenges. Specifically, our
proof-of-concept yields models with up to 0.92, forecasting value up to
the 28 days tested, and several pairs of models similar enough to suggest that
transferring models from one location to another without re-training is
feasible.
Based on these preliminary results, we close with a research agenda designed
to overcome these challenges and produce a disease monitoring and forecasting
system that is significantly more effective, robust, and globally comprehensive
than the current state of the art.Comment: 27 pages; 4 figures; 4 tables. Version 2: Cite McIver & Brownstein
and adjust novelty claims accordingly; revise title; various revisions for
clarit
Results from the centers for disease control and prevention's predict the 2013-2014 Influenza Season Challenge
Background: Early insights into the timing of the start, peak, and intensity of the influenza season could be useful in planning influenza prevention and control activities. To encourage development and innovation in influenza forecasting, the Centers for Disease Control and Prevention (CDC) organized a challenge to predict the 2013-14 Unites States influenza season. Methods: Challenge contestants were asked to forecast the start, peak, and intensity of the 2013-2014 influenza season at the national level and at any or all Health and Human Services (HHS) region level(s). The challenge ran from December 1, 2013-March 27, 2014; contestants were required to submit 9 biweekly forecasts at the national level to be eligible. The selection of the winner was based on expert evaluation of the methodology used to make the prediction and the accuracy of the prediction as judged against the U.S. Outpatient Influenza-like Illness Surveillance Network (ILINet). Results: Nine teams submitted 13 forecasts for all required milestones. The first forecast was due on December 2, 2013; 3/13 forecasts received correctly predicted the start of the influenza season within one week, 1/13 predicted the peak within 1 week, 3/13 predicted the peak ILINet percentage within 1 %, and 4/13 predicted the season duration within 1 week. For the prediction due on December 19, 2013, the number of forecasts that correctly forecasted the peak week increased to 2/13, the peak percentage to 6/13, and the duration of the season to 6/13. As the season progressed, the forecasts became more stable and were closer to the season milestones. Conclusion: Forecasting has become technically feasible, but further efforts are needed to improve forecast accuracy so that policy makers can reliably use these predictions. CDC and challenge contestants plan to build upon the methods developed during this contest to improve the accuracy of influenza forecasts. © 2016 The Author(s)
Marshfield Clinic: Health Information Technology Paves the Way for Population Health Management
Highlights Fund-defined attributes of an ideal care delivery system and best practices, including an internal electronic health record, primary care teams, physician quality metrics and mentors, and standardized care processes for chronic care management
Disease Surveillance Networks Initiative Asia: Final Evaluation
The DSN Initiative was launched in 2007 under the new strategy of the Rockefeller Foundation. The initiative intends:[1] To improve human resources for disease surveillance in developing countries, thus bolstering national capacity to monitor, report, and respond to outbreaks;[2] To support regional networks to promote collaboration in disease surveillance and response across countries; and[3] To build bridges between regional and global monitoring effortsThe purpose of the DSN evaluation in the Mekong region was twofold:[1]To inform the work and strategy of the Foundation, its grantees, and the broader field of disease surveillance, based on the experience of DSN investments in the Mekong region. More specifically, the evaluation will inform future directions and strategies for current areas of DSN Initiative work, particularly in Asia, and will highlight potential new areas of work and strategy; and[2] To provide accountability to the Rockefeller Foundation's board, staff, and stakeholders for the DSN funds spent in the Mekong region
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