Systematizing Genome Privacy Research: A Privacy-Enhancing Technologies Perspective

Rapid advances in human genomics are enabling researchers to gain a better understanding of the role of the genome in our health and well-being, stimulating hope for more effective and cost efficient healthcare. However, this also prompts a number of security and privacy concerns stemming from the distinctive characteristics of genomic data. To address them, a new research community has emerged and produced a large number of publications and initiatives. In this paper, we rely on a structured methodology to contextualize and provide a critical analysis of the current knowledge on privacy-enhancing technologies used for testing, storing, and sharing genomic data, using a representative sample of the work published in the past decade. We identify and discuss limitations, technical challenges, and issues faced by the community, focusing in particular on those that are inherently tied to the nature of the problem and are harder for the community alone to address. Finally, we report on the importance and difficulty of the identified challenges based on an online survey of genome data privacy expertsComment: To appear in the Proceedings on Privacy Enhancing Technologies (PoPETs), Vol. 2019, Issue

Security and Efficiency Analysis of the Hamming Distance Computation Protocol Based on Oblivious Transfer

open access articleBringer et al. proposed two cryptographic protocols for the computation of Hamming distance. Their first scheme uses Oblivious Transfer and provides security in the semi-honest model. The other scheme uses Committed Oblivious Transfer and is claimed to provide full security in the malicious case. The proposed protocols have direct implications to biometric authentication schemes between a prover and a verifier where the verifier has biometric data of the users in plain form. In this paper, we show that their protocol is not actually fully secure against malicious adversaries. More precisely, our attack breaks the soundness property of their protocol where a malicious user can compute a Hamming distance which is different from the actual value. For biometric authentication systems, this attack allows a malicious adversary to pass the authentication without knowledge of the honest user's input with at most $O(n)$ complexity instead of $O(2^n)$, where $n$ is the input length. We propose an enhanced version of their protocol where this attack is eliminated. The security of our modified protocol is proven using the simulation-based paradigm. Furthermore, as for efficiency concerns, the modified protocol utilizes Verifiable Oblivious Transfer which does not require the commitments to outputs which improves its efficiency significantly

THRIVE: Threshold Homomorphic encryption based secure and privacy preserving bIometric VErification system

In this paper, we propose a new biometric verification and template protection system which we call the THRIVE system. The system includes novel enrollment and authentication protocols based on threshold homomorphic cryptosystem where the private key is shared between a user and the verifier. In the THRIVE system, only encrypted binary biometric templates are stored in the database and verification is performed via homomorphically randomized templates, thus, original templates are never revealed during the authentication stage. The THRIVE system is designed for the malicious model where the cheating party may arbitrarily deviate from the protocol specification. Since threshold homomorphic encryption scheme is used, a malicious database owner cannot perform decryption on encrypted templates of the users in the database. Therefore, security of the THRIVE system is enhanced using a two-factor authentication scheme involving the user's private key and the biometric data. We prove security and privacy preservation capability of the proposed system in the simulation-based model with no assumption. The proposed system is suitable for applications where the user does not want to reveal her biometrics to the verifier in plain form but she needs to proof her physical presence by using biometrics. The system can be used with any biometric modality and biometric feature extraction scheme whose output templates can be binarized. The overall connection time for the proposed THRIVE system is estimated to be 336 ms on average for 256-bit biohash vectors on a desktop PC running with quad-core 3.2 GHz CPUs at 10 Mbit/s up/down link connection speed. Consequently, the proposed system can be efficiently used in real life applications

Prochlo: Strong Privacy for Analytics in the Crowd

The large-scale monitoring of computer users' software activities has become commonplace, e.g., for application telemetry, error reporting, or demographic profiling. This paper describes a principled systems architecture---Encode, Shuffle, Analyze (ESA)---for performing such monitoring with high utility while also protecting user privacy. The ESA design, and its Prochlo implementation, are informed by our practical experiences with an existing, large deployment of privacy-preserving software monitoring. (cont.; see the paper

Chameleon: A Hybrid Secure Computation Framework for Machine Learning Applications

We present Chameleon, a novel hybrid (mixed-protocol) framework for secure function evaluation (SFE) which enables two parties to jointly compute a function without disclosing their private inputs. Chameleon combines the best aspects of generic SFE protocols with the ones that are based upon additive secret sharing. In particular, the framework performs linear operations in the ring $\mathbb{Z}_{2^l}$ using additively secret shared values and nonlinear operations using Yao's Garbled Circuits or the Goldreich-Micali-Wigderson protocol. Chameleon departs from the common assumption of additive or linear secret sharing models where three or more parties need to communicate in the online phase: the framework allows two parties with private inputs to communicate in the online phase under the assumption of a third node generating correlated randomness in an offline phase. Almost all of the heavy cryptographic operations are precomputed in an offline phase which substantially reduces the communication overhead. Chameleon is both scalable and significantly more efficient than the ABY framework (NDSS'15) it is based on. Our framework supports signed fixed-point numbers. In particular, Chameleon's vector dot product of signed fixed-point numbers improves the efficiency of mining and classification of encrypted data for algorithms based upon heavy matrix multiplications. Our evaluation of Chameleon on a 5 layer convolutional deep neural network shows 133x and 4.2x faster executions than Microsoft CryptoNets (ICML'16) and MiniONN (CCS'17), respectively