Some resonances between Eastern thought and Integral Biomathics in the framework of the WLIMES formalism for modelling living systems

Forty-two years ago, Capra published “The Tao of Physics” (Capra, 1975). In this book (page 17) he writes: “The exploration of the atomic and subatomic world in the twentieth century has …. necessitated a radical revision of many of our basic concepts” and that, unlike ‘classical’ physics, the sub-atomic and quantum “modern physics” shows resonances with Eastern thoughts and “leads us to a view of the world which is very similar to the views held by mystics of all ages and traditions.“ This article stresses an analogous situation in biology with respect to a new theoretical approach for studying living systems, Integral Biomathics (IB), which also exhibits some resonances with Eastern thought. Stepping on earlier research in cybernetics1 and theoretical biology,2 IB has been developed since 2011 by over 100 scientists from a number of disciplines who have been exploring a substantial set of theoretical frameworks. From that effort, the need for a robust core model utilizing advanced mathematics and computation adequate for understanding the behavior of organisms as dynamic wholes was identified. At this end, the authors of this article have proposed WLIMES (Ehresmann and Simeonov, 2012), a formal theory for modeling living systems integrating both the Memory Evolutive Systems (Ehresmann and Vanbremeersch, 2007) and the Wandering Logic Intelligence (Simeonov, 2002b). Its principles will be recalled here with respect to their resonances to Eastern thought

Modeling and visualization of trace data

ASML Lithography machines trace data are vital inputs for configuration and calibration of machine components. To visualize these trace data, ASML engineers regularly utilize Gantt chart based visualization tools. Different components of lithography machines use different data formats to log their behavior. Accordingly different departments in ASML are using different trace data visualization tools. Developing and maintaining multiple visualizer tools is costly, time consuming and reduces interoperability. This report describes a project conducted to achieve a generic and an extensible Gantt visualization tool. The tool is developed using Model Driven Engineering (MDE) methodology. To capture generic trace data attributes, Gantt figure elements and the mapping between the two languages, Gantt data, Gantt figure and Gantt mapping language are defined. Furthermore, transformation modules that transform data from one format to another are specified. The extensibility of the Gantt visualization tool is verified by porting the tool in to two different domains. The effort required to port the tool to a new domain was found to be very minimal (12 man-hours). This is a considerable gain compared to an average of four to six months that would take if the tool was developed from scratch