Stochastic collocation on unstructured multivariate meshes

Collocation has become a standard tool for approximation of parameterized systems in the uncertainty quantification (UQ) community. Techniques for least-squares regularization, compressive sampling recovery, and interpolatory reconstruction are becoming standard tools used in a variety of applications. Selection of a collocation mesh is frequently a challenge, but methods that construct geometrically "unstructured" collocation meshes have shown great potential due to attractive theoretical properties and direct, simple generation and implementation. We investigate properties of these meshes, presenting stability and accuracy results that can be used as guides for generating stochastic collocation grids in multiple dimensions.Comment: 29 pages, 6 figure

Can coercive formulations lead to fast and accurate solution of the Helmholtz equation?

A new, coercive formulation of the Helmholtz equation was introduced in [Moiola, Spence, SIAM Rev. 2014]. In this paper we investigate $h$-version Galerkin discretisations of this formulation, and the iterative solution of the resulting linear systems. We find that the coercive formulation behaves similarly to the standard formulation in terms of the pollution effect (i.e. to maintain accuracy as $k\to\infty$, $h$ must decrease with $k$ at the same rate as for the standard formulation). We prove $k$-explicit bounds on the number of GMRES iterations required to solve the linear system of the new formulation when it is preconditioned with a prescribed symmetric positive-definite matrix. Even though the number of iterations grows with $k$, these are the first such rigorous bounds on the number of GMRES iterations for a preconditioned formulation of the Helmholtz equation, where the preconditioner is a symmetric positive-definite matrix.Comment: 27 pages, 7 figure

Novel Discretization Schemes for the Numerical Simulation of Membrane Dynamics

Motivated by the demands of simulating flapping wings of Micro Air Vehicles, novel numerical methods were developed and evaluated for the dynamic simulation of membranes. For linear membranes, a mixed-form time-continuous Galerkin method was employed using trilinear space-time elements, and the entire space-time domain was discretized and solved simultaneously. For geometrically nonlinear membranes, the model incorporated two new schemes that were independently developed and evaluated. Time marching was performed using quintic Hermite polynomials uniquely determined by end-point jerk constraints. The single-step, implicit scheme was significantly more accurate than the most common Newmark schemes. For a simple harmonic oscillator, the scheme was found to be symplectic, frequency-preserving, and conditionally stable. Time step size was limited by accuracy requirements rather than stability. The spatial discretization scheme employed a staggered grid, grouping of nonlinear terms, and polygon shape functions in a strong-form point collocation formulation. Validation against existing experimental data showed the method to be accurate until hyperelastic effects dominate

Algorithms for Large Scale Problems in Eigenvalue and Svd Computations and in Big Data Applications

As ”big data” has increasing influence on our daily life and research activities, it poses significant challenges on various research areas. Some applications often demand a fast solution of large, sparse eigenvalue and singular value problems; In other applications, extracting knowledge from large-scale data requires many techniques such as statistical calculations, data mining, and high performance computing. In this dissertation, we develop efficient and robust iterative methods and software for the computation of eigenvalue and singular values. We also develop practical numerical and data mining techniques to estimate the trace of a function of a large, sparse matrix and to detect in real-time blob-filaments in fusion plasma on extremely large parallel computers. In the first work, we propose a hybrid two stage SVD method for efficiently and accurately computing a few extreme singular triplets, especially the ones corresponding to the smallest singular values. The first stage achieves fast convergence while the second achieves the final accuracy. Furthermore, we develop a high-performance preconditioned SVD software based on the proposed method on top of the state-of-the-art eigensolver PRIMME. The method can be used with or without preconditioning, on parallel computers, and is superior to other state-of-the-art SVD methods in both efficiency and robustness. In the second study, we provide insights and develop practical algorithms to accomplish efficient and accurate computation of interior eigenpairs using refined projection techniques in non-Krylov iterative methods. By analyzing different implementations of the refined projection, we propose a new hybrid method to efficiently find interior eigenpairs without compromising accuracy. Our numerical experiments illustrate the efficiency and robustness of the proposed method. In the third work, we present a novel method to estimate the trace of matrix inverse that exploits the pattern correlation between the diagonal of the inverse of the matrix and that of some approximate inverse. We leverage various sampling and fitting techniques to fit the diagonal of the approximation to that of the inverse. Our method may serve as a standalone kernel for providing a fast trace estimate or as a variance reduction method for Monte Carlo in some cases. An extensive set of experiments demonstrate the potential of our method. In the fourth study, we provide first results on applying outlier detection techniques to effectively tackle the fusion blob detection problem on extremely large parallel machines. We present a real-time region outlier detection algorithm to efficiently find and track blobs in fusion experiments and simulations. Our experiments demonstrated we can achieve linear time speedup up to 1024 MPI processes and complete blob detection in two or three milliseconds