Quantumlike Chaos in the Frequency Distributions of the Bases A, C, G, T in Drosophila DNA

Continuous periodogram power spectral analyses of fractal fluctuations of frequency distributions of bases A, C, G, T in Drosophila DNA show that the power spectra follow the universal inverse power-law form of the statistical normal distribution. Inverse power-law form for power spectra of space-time fluctuations is generic to dynamical systems in nature and is identified as self-organized criticality. The author has developed a general systems theory, which provides universal quantification for observed self-organized criticality in terms of the statistical normal distribution. The long-range correlations intrinsic to self-organized criticality in macro-scale dynamical systems are a signature of quantumlike chaos. The fractal fluctuations self-organize to form an overall logarithmic spiral trajectory with the quasiperiodic Penrose tiling pattern for the internal structure. Power spectral analysis resolves such a spiral trajectory as an eddy continuum with embedded dominant wavebands. The dominant peak periodicities are functions of the golden mean. The observed fractal frequency distributions of the Drosophila DNA base sequences exhibit quasicrystalline structure with long-range spatial correlations or self-organized criticality. Modification of the DNA base sequence structure at any location may have significant noticeable effects on the function of the DNA molecule as a whole. The presence of non-coding introns may not be redundant, but serve to organize the effective functioning of the coding exons in the DNA molecule as a complete unit.Comment: 46 pages, 9 figure

Specific "scientific" data structures, and their processing

Programming physicists use, as all programmers, arrays, lists, tuples, records, etc., and this requires some change in their thought patterns while converting their formulae into some code, since the "data structures" operated upon, while elaborating some theory and its consequences, are rather: power series and Pad\'e approximants, differential forms and other instances of differential algebras, functionals (for the variational calculus), trajectories (solutions of differential equations), Young diagrams and Feynman graphs, etc. Such data is often used in a [semi-]numerical setting, not necessarily "symbolic", appropriate for the computer algebra packages. Modules adapted to such data may be "just libraries", but often they become specific, embedded sub-languages, typically mapped into object-oriented frameworks, with overloaded mathematical operations. Here we present a functional approach to this philosophy. We show how the usage of Haskell datatypes and - fundamental for our tutorial - the application of lazy evaluation makes it possible to operate upon such data (in particular: the "infinite" sequences) in a natural and comfortable manner.Comment: In Proceedings DSL 2011, arXiv:1109.032

Randomness Quality of CI Chaotic Generators: Applications to Internet Security

Due to the rapid development of the Internet in recent years, the need to find new tools to reinforce trust and security through the Internet has became a major concern. The discovery of new pseudo-random number generators with a strong level of security is thus becoming a hot topic, because numerous cryptosystems and data hiding schemes are directly dependent on the quality of these generators. At the conference Internet`09, we have described a generator based on chaotic iterations, which behaves chaotically as defined by Devaney. In this paper, the proposal is to improve the speed and the security of this generator, to make its use more relevant in the Internet security context. To do so, a comparative study between various generators is carried out and statistical results are given. Finally, an application in the information hiding framework is presented, to give an illustrative example of the use of such a generator in the Internet security field.Comment: 6 pages,6 figures, In INTERNET'2010. The 2nd Int. Conf. on Evolving Internet, Valencia, Spain, pages 125-130, September 2010. IEEE Computer Society Press Note: Best Paper awar

Resonance structures in coupled two-component ϕ4\phi^4 model

We present a numerical study of the process of the kink-antikink collisions in the coupled one-dimensional two-component $\phi^4$ model. Our results reveal two different soliton solutions which represent double kink configuration and kink-non-topological soliton (lump) bound state. Collision of these solitons leads to very reach resonance structure which is related to reversible energy exchange between the kinks, non-topological solitons and the internal vibrational modes. Various channels of the collisions are discussed, it is shown there is a new type of self-similar fractal structure which appears in the collisions of the relativistic kinks, there the width of the resonance windows increases with the increase of the impact velocity. An analytical approximation scheme is discussed in the limit of the perturbative coupling between the sectors. Considering the spectrum of linear fluctuations around the solitons we found that the double kink configuration is unstable if the coupling constant between the sectors is negative.Comment: 21 pages, 19 figure